RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 DMAC1Q96GE9 116 aa8.21□□□□□ -1.1
HDAC11-202ENST00000402259 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
HDAC11-202ENST00000402259 SNURFQ9Y675 71 aa8.18□□□□□ -1.1
HDAC11-202ENST00000402259 NDUFC1O43677 76 aa8.16□□□□□ -1.1
HDAC11-202ENST00000402259 COX7CP15954 63 aa8.15□□□□□ -1.1
HDAC11-202ENST00000402259 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
HDAC11-202ENST00000402259 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
HDAC11-202ENST00000402259 ACYP2P14621 99 aa8.08□□□□□ -1.12
HDAC11-202ENST00000402259 H0YAA0 97 aa8.03□□□□□ -1.12
HDAC11-202ENST00000402259 LCE2BO14633 110 aa7.99□□□□□ -1.13
HDAC11-202ENST00000402259 CCDC179H3BU77 68 aa7.98□□□□□ -1.13
HDAC11-202ENST00000402259 PCP4P48539 62 aa7.97□□□□□ -1.13
HDAC11-202ENST00000402259 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
HDAC11-202ENST00000402259 H7BZZ5 65 aa7.93□□□□□ -1.14
HDAC11-202ENST00000402259 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
HDAC11-202ENST00000402259 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
HDAC11-202ENST00000402259 CYSTM1Q9H1C7 97 aa7.91□□□□□ -1.14
HDAC11-202ENST00000402259 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
HDAC11-202ENST00000402259 CHKB-CPT1BH3BT56 60 aa7.9□□□□□ -1.14
HDAC11-202ENST00000402259 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
HDAC11-202ENST00000402259 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
HDAC11-202ENST00000402259 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
HDAC11-202ENST00000402259 FSIP2Q5CZC0 6907 aa7.84□□□□□ -1.16
HDAC11-202ENST00000402259 USH2AO75445 5202 aa7.81□□□□□ -1.16
HDAC11-202ENST00000402259 COA5Q86WW8 74 aa7.8□□□□□ -1.16
HDAC11-202ENST00000402259 TMEM258P61165 79 aa7.77□□□□□ -1.17
HDAC11-202ENST00000402259 KRTAP19-8Q3LI54 63 aa7.77□□□□□ -1.17
HDAC11-202ENST00000402259 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.17
HDAC11-202ENST00000402259 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
HDAC11-202ENST00000402259 P0C880 135 aa7.75□□□□□ -1.17
HDAC11-202ENST00000402259 Q5VV11 94 aa7.71□□□□□ -1.18
HDAC11-202ENST00000402259 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
HDAC11-202ENST00000402259 MT1BP07438 61 aa7.68□□□□□ -1.18
HDAC11-202ENST00000402259 R4GN34 69 aa7.68□□□□□ -1.18
HDAC11-202ENST00000402259 SSPOA2VEC9 5147 aa7.67□□□□□ -1.18
HDAC11-202ENST00000402259 M0QZ58 72 aa7.61□□□□□ -1.19
HDAC11-202ENST00000402259 SEC61GP60059 68 aa7.54□□□□□ -1.2
HDAC11-202ENST00000402259 SERP1Q9Y6X1 66 aa7.53□□□□□ -1.2
HDAC11-202ENST00000402259 FCGBPQ9Y6R7 5405 aaPredicted RBP7.47□□□□□ -1.21
HDAC11-202ENST00000402259 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
HDAC11-202ENST00000402259 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
HDAC11-202ENST00000402259 A6NN06 94 aa7.44□□□□□ -1.22
HDAC11-202ENST00000402259 LINC01554Q52M75 96 aa7.44□□□□□ -1.22
HDAC11-202ENST00000402259 RPS28P62857 69 aaKnown RBP7.42□□□□□ -1.22
HDAC11-202ENST00000402259 A0A1B0GU69 56 aa7.4□□□□□ -1.22
HDAC11-202ENST00000402259 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
HDAC11-202ENST00000402259 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
HDAC11-202ENST00000402259 A0A1B0GU33 70 aa7.37□□□□□ -1.23
HDAC11-202ENST00000402259 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
HDAC11-202ENST00000402259 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
HDAC11-202ENST00000402259 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
HDAC11-202ENST00000402259 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
HDAC11-202ENST00000402259 MT1XP80297 61 aa7.29□□□□□ -1.24
HDAC11-202ENST00000402259 V9GYY9 64 aa7.28□□□□□ -1.24
HDAC11-202ENST00000402259 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
HDAC11-202ENST00000402259 Q1T7F1 81 aa7.2□□□□□ -1.26
HDAC11-202ENST00000402259 A0A0D9SG42 100 aa7.18□□□□□ -1.26
HDAC11-202ENST00000402259 MACF1Q9UPN3 7388 aaKnown RBP7.17□□□□□ -1.26
HDAC11-202ENST00000402259 KRTAP9-7A8MTY7 169 aa7.17□□□□□ -1.26
HDAC11-202ENST00000402259 CAMK2N1Q7Z7J9 78 aa7.1□□□□□ -1.27
HDAC11-202ENST00000402259 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
HDAC11-202ENST00000402259 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
HDAC11-202ENST00000402259 UQCR11O14957 56 aa7.08□□□□□ -1.28
HDAC11-202ENST00000402259 PSPHP1O15172 72 aa7.07□□□□□ -1.28
HDAC11-202ENST00000402259 KRTAP6-3Q3LI67 103 aa7.06□□□□□ -1.28
HDAC11-202ENST00000402259 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
HDAC11-202ENST00000402259 A8MU10 97 aa7.05□□□□□ -1.28
HDAC11-202ENST00000402259 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
HDAC11-202ENST00000402259 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
HDAC11-202ENST00000402259 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
HDAC11-202ENST00000402259 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
HDAC11-202ENST00000402259 A6NED7 52 aa6.9□□□□□ -1.3
HDAC11-202ENST00000402259 KRTAP5-9P26371 169 aa6.9□□□□□ -1.3
HDAC11-202ENST00000402259 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
HDAC11-202ENST00000402259 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
HDAC11-202ENST00000402259 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
HDAC11-202ENST00000402259 K7ERS5 55 aa6.75□□□□□ -1.33
HDAC11-202ENST00000402259 KMT2DO14686 5537 aa6.75□□□□□ -1.33
HDAC11-202ENST00000402259 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
HDAC11-202ENST00000402259 SPRR2FQ96RM1 72 aa6.73□□□□□ -1.33
HDAC11-202ENST00000402259 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
HDAC11-202ENST00000402259 TNP1P09430 55 aa6.67□□□□□ -1.34
HDAC11-202ENST00000402259 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
HDAC11-202ENST00000402259 NEBP20929 6669 aa6.58□□□□□ -1.36
HDAC11-202ENST00000402259 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
HDAC11-202ENST00000402259 SPRR2EP22531 72 aa6.55□□□□□ -1.36
HDAC11-202ENST00000402259 SPRR2BP35325 72 aa6.55□□□□□ -1.36
HDAC11-202ENST00000402259 SPRR2AP35326 72 aa6.55□□□□□ -1.36
HDAC11-202ENST00000402259 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
HDAC11-202ENST00000402259 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
HDAC11-202ENST00000402259 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
HDAC11-202ENST00000402259 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
HDAC11-202ENST00000402259 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
HDAC11-202ENST00000402259 MT1EP04732 61 aa6.45□□□□□ -1.38
HDAC11-202ENST00000402259 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
HDAC11-202ENST00000402259 PRO0628Q9UI54 55 aa6.38□□□□□ -1.39
HDAC11-202ENST00000402259 ROMO1P60602 79 aa6.35□□□□□ -1.39
HDAC11-202ENST00000402259 SPRR2DP22532 72 aa6.33□□□□□ -1.4
HDAC11-202ENST00000402259 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
HDAC11-202ENST00000402259 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms