RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 Q5VV11 94 aa4.39□□□□□ -1.71
LINC02408-201ENST00000400306 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
LINC02408-201ENST00000400306 ATP11AUNQ6ZP68 121 aa4.37□□□□□ -1.71
LINC02408-201ENST00000400306 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
LINC02408-201ENST00000400306 Q96NJ1 140 aa4.37□□□□□ -1.71
LINC02408-201ENST00000400306 ASB16-AS1Q495Z4 193 aa4.36□□□□□ -1.71
LINC02408-201ENST00000400306 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
LINC02408-201ENST00000400306 LINC00208Q96KT6 92 aa4.35□□□□□ -1.71
LINC02408-201ENST00000400306 LOC101927531A0A1B0GV80 90 aa4.34□□□□□ -1.71
LINC02408-201ENST00000400306 C7orf65Q6ZTY9 151 aa4.34□□□□□ -1.71
LINC02408-201ENST00000400306 Q75L30 129 aa4.34□□□□□ -1.71
LINC02408-201ENST00000400306 LINC00472Q9H8W2 130 aa4.34□□□□□ -1.71
LINC02408-201ENST00000400306 H0Y9P7 68 aa4.32□□□□□ -1.72
LINC02408-201ENST00000400306 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
LINC02408-201ENST00000400306 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
LINC02408-201ENST00000400306 WFDC13Q8IUB5 93 aa4.32□□□□□ -1.72
LINC02408-201ENST00000400306 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
LINC02408-201ENST00000400306 A6NN06 94 aa4.31□□□□□ -1.72
LINC02408-201ENST00000400306 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
LINC02408-201ENST00000400306 A8MU10 97 aa4.3□□□□□ -1.72
LINC02408-201ENST00000400306 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
LINC02408-201ENST00000400306 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
LINC02408-201ENST00000400306 A8MWP4 228 aa4.29□□□□□ -1.72
LINC02408-201ENST00000400306 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
LINC02408-201ENST00000400306 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
LINC02408-201ENST00000400306 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
LINC02408-201ENST00000400306 IGHV6-1A0A0B4J1U7 121 aa4.28□□□□□ -1.72
LINC02408-201ENST00000400306 COA5Q86WW8 74 aa4.28□□□□□ -1.72
LINC02408-201ENST00000400306 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
LINC02408-201ENST00000400306 A0A1B0GVX0 72 aa4.27□□□□□ -1.73
LINC02408-201ENST00000400306 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
LINC02408-201ENST00000400306 A6NED7 52 aa4.26□□□□□ -1.73
LINC02408-201ENST00000400306 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
LINC02408-201ENST00000400306 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
LINC02408-201ENST00000400306 LINC00313P59037 77 aa4.24□□□□□ -1.73
LINC02408-201ENST00000400306 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
LINC02408-201ENST00000400306 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
LINC02408-201ENST00000400306 C8orf17Q9NRJ1 99 aa4.23□□□□□ -1.73
LINC02408-201ENST00000400306 KRTAP16-1A8MUX0 517 aa4.22□□□□□ -1.73
LINC02408-201ENST00000400306 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
LINC02408-201ENST00000400306 PCOTHQ58A44 107 aa4.18□□□□□ -1.74
LINC02408-201ENST00000400306 HRES1P13985 223 aa4.17□□□□□ -1.74
LINC02408-201ENST00000400306 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
LINC02408-201ENST00000400306 A8MUU9 505 aa4.17□□□□□ -1.74
LINC02408-201ENST00000400306 SPINK7P58062 85 aa4.17□□□□□ -1.74
LINC02408-201ENST00000400306 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
LINC02408-201ENST00000400306 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
LINC02408-201ENST00000400306 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
LINC02408-201ENST00000400306 SEC61BP60468 96 aaKnown RBP4.13□□□□□ -1.75
LINC02408-201ENST00000400306 KRTAP4-1Q9BYQ7 146 aa4.12□□□□□ -1.75
LINC02408-201ENST00000400306 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
LINC02408-201ENST00000400306 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
LINC02408-201ENST00000400306 ACYP2P14621 99 aa4.09□□□□□ -1.75
LINC02408-201ENST00000400306 Q5W150 140 aa4.09□□□□□ -1.76
LINC02408-201ENST00000400306 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
LINC02408-201ENST00000400306 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
LINC02408-201ENST00000400306 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
LINC02408-201ENST00000400306 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
LINC02408-201ENST00000400306 A0A1B0GU69 56 aa4.02□□□□□ -1.77
LINC02408-201ENST00000400306 ADM2Q7Z4H4 148 aa4.01□□□□□ -1.77
LINC02408-201ENST00000400306 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
LINC02408-201ENST00000400306 UQCR11O14957 56 aa3.99□□□□□ -1.77
LINC02408-201ENST00000400306 KRTAP19-2Q3LHN2 52 aa3.96□□□□□ -1.78
LINC02408-201ENST00000400306 ROMO1P60602 79 aa3.94□□□□□ -1.78
LINC02408-201ENST00000400306 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
LINC02408-201ENST00000400306 CSAG1Q6PB30 78 aa3.91□□□□□ -1.78
LINC02408-201ENST00000400306 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
LINC02408-201ENST00000400306 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
LINC02408-201ENST00000400306 MT1HP80294 61 aa3.91□□□□□ -1.78
LINC02408-201ENST00000400306 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
LINC02408-201ENST00000400306 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
LINC02408-201ENST00000400306 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.8
LINC02408-201ENST00000400306 H1FX-AS1Q4G0G2 97 aa3.84□□□□□ -1.8
LINC02408-201ENST00000400306 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
LINC02408-201ENST00000400306 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
LINC02408-201ENST00000400306 M0R2T5 61 aa3.83□□□□□ -1.8
LINC02408-201ENST00000400306 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
LINC02408-201ENST00000400306 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
LINC02408-201ENST00000400306 H0YAA0 97 aa3.79□□□□□ -1.8
LINC02408-201ENST00000400306 S4R3F8 94 aa3.79□□□□□ -1.8
LINC02408-201ENST00000400306 USH2AO75445 5202 aa3.78□□□□□ -1.8
LINC02408-201ENST00000400306 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
LINC02408-201ENST00000400306 P0C880 135 aa3.76□□□□□ -1.81
LINC02408-201ENST00000400306 A0A1B0GU33 70 aa3.76□□□□□ -1.81
LINC02408-201ENST00000400306 K7ERS5 55 aa3.73□□□□□ -1.81
LINC02408-201ENST00000400306 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.81
LINC02408-201ENST00000400306 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
LINC02408-201ENST00000400306 MT2AP02795 61 aa3.68□□□□□ -1.82
LINC02408-201ENST00000400306 MT3P25713 68 aa3.68□□□□□ -1.82
LINC02408-201ENST00000400306 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
LINC02408-201ENST00000400306 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
LINC02408-201ENST00000400306 NEBP20929 6669 aa3.66□□□□□ -1.82
LINC02408-201ENST00000400306 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
LINC02408-201ENST00000400306 MT1FP04733 61 aa3.66□□□□□ -1.82
LINC02408-201ENST00000400306 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
LINC02408-201ENST00000400306 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
LINC02408-201ENST00000400306 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
LINC02408-201ENST00000400306 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
LINC02408-201ENST00000400306 CRIPTQ9P021 101 aa3.6□□□□□ -1.83
LINC02408-201ENST00000400306 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms