RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 C9orf92A6NGG3 77 aa5.2□□□□□ -1.58
LINC00243-201ENST00000399196 PCOTHQ58A44 107 aa5.2□□□□□ -1.58
LINC00243-201ENST00000399196 LCE2BO14633 110 aa5.19□□□□□ -1.58
LINC00243-201ENST00000399196 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
LINC00243-201ENST00000399196 LINC01558Q9Y6Z2 57 aa5.18□□□□□ -1.58
LINC00243-201ENST00000399196 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
LINC00243-201ENST00000399196 HERC1Q15751 4861 aa5.16□□□□□ -1.58
LINC00243-201ENST00000399196 IGKV2-30P06310 120 aa5.12□□□□□ -1.59
LINC00243-201ENST00000399196 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
LINC00243-201ENST00000399196 A8MUU9 505 aa5.11□□□□□ -1.59
LINC00243-201ENST00000399196 HRES1P13985 223 aa5.09□□□□□ -1.59
LINC00243-201ENST00000399196 SPINK7P58062 85 aa5.09□□□□□ -1.59
LINC00243-201ENST00000399196 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
LINC00243-201ENST00000399196 LPAP08519 4548 aa5.08□□□□□ -1.6
LINC00243-201ENST00000399196 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
LINC00243-201ENST00000399196 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
LINC00243-201ENST00000399196 XP32Q5T750 250 aa5.04□□□□□ -1.6
LINC00243-201ENST00000399196 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
LINC00243-201ENST00000399196 RPL37P61927 97 aaKnown RBP5.01□□□□□ -1.61
LINC00243-201ENST00000399196 LORP23490 312 aaPredicted RBP5.01□□□□□ -1.61
LINC00243-201ENST00000399196 DMAC1Q96GE9 116 aa5.01□□□□□ -1.61
LINC00243-201ENST00000399196 LRP2P98164 4655 aa4.99□□□□□ -1.61
LINC00243-201ENST00000399196 ACYP2P14621 99 aa4.95□□□□□ -1.62
LINC00243-201ENST00000399196 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
LINC00243-201ENST00000399196 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
LINC00243-201ENST00000399196 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
LINC00243-201ENST00000399196 A0A1B0GU69 56 aa4.91□□□□□ -1.62
LINC00243-201ENST00000399196 K7ERS5 55 aa4.91□□□□□ -1.62
LINC00243-201ENST00000399196 MUC17Q685J3 4493 aa4.9□□□□□ -1.62
LINC00243-201ENST00000399196 MIR22HGQ0VDD5 57 aa4.88□□□□□ -1.63
LINC00243-201ENST00000399196 UQCR11O14957 56 aa4.87□□□□□ -1.63
LINC00243-201ENST00000399196 ROMO1P60602 79 aa4.86□□□□□ -1.63
LINC00243-201ENST00000399196 COX6B2Q6YFQ2 88 aa4.85□□□□□ -1.63
LINC00243-201ENST00000399196 UBR4Q5T4S7 5183 aa4.84□□□□□ -1.63
LINC00243-201ENST00000399196 CSAG1Q6PB30 78 aa4.84□□□□□ -1.64
LINC00243-201ENST00000399196 MUC2Q02817 5179 aa4.77□□□□□ -1.65
LINC00243-201ENST00000399196 RNF213Q63HN8 5207 aa4.76□□□□□ -1.65
LINC00243-201ENST00000399196 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
LINC00243-201ENST00000399196 P0C880 135 aa4.73□□□□□ -1.65
LINC00243-201ENST00000399196 H1FX-AS1Q4G0G2 97 aa4.73□□□□□ -1.65
LINC00243-201ENST00000399196 S4R3F8 94 aa4.71□□□□□ -1.65
LINC00243-201ENST00000399196 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
LINC00243-201ENST00000399196 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
LINC00243-201ENST00000399196 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
LINC00243-201ENST00000399196 KRTAP10-6P60371 365 aaPredicted RBP4.61□□□□□ -1.67
LINC00243-201ENST00000399196 H0YAA0 97 aa4.61□□□□□ -1.67
LINC00243-201ENST00000399196 A0A1B0GU33 70 aa4.57□□□□□ -1.68
LINC00243-201ENST00000399196 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
LINC00243-201ENST00000399196 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
LINC00243-201ENST00000399196 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
LINC00243-201ENST00000399196 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
LINC00243-201ENST00000399196 M0R2T5 61 aa4.43□□□□□ -1.7
LINC00243-201ENST00000399196 MT1HP80294 61 aa4.43□□□□□ -1.7
LINC00243-201ENST00000399196 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
LINC00243-201ENST00000399196 A0A0D9SG42 100 aa4.41□□□□□ -1.7
LINC00243-201ENST00000399196 M0QZ58 72 aa4.37□□□□□ -1.71
LINC00243-201ENST00000399196 R4GN34 69 aa4.37□□□□□ -1.71
LINC00243-201ENST00000399196 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
LINC00243-201ENST00000399196 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
LINC00243-201ENST00000399196 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
LINC00243-201ENST00000399196 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
LINC00243-201ENST00000399196 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
LINC00243-201ENST00000399196 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
LINC00243-201ENST00000399196 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
LINC00243-201ENST00000399196 MT2AP02795 61 aa4.22□□□□□ -1.73
LINC00243-201ENST00000399196 MT1FP04733 61 aa4.2□□□□□ -1.74
LINC00243-201ENST00000399196 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
LINC00243-201ENST00000399196 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.74
LINC00243-201ENST00000399196 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
LINC00243-201ENST00000399196 PLAC4Q8WY50 150 aa4.09□□□□□ -1.76
LINC00243-201ENST00000399196 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
LINC00243-201ENST00000399196 USH2AO75445 5202 aa4.02□□□□□ -1.77
LINC00243-201ENST00000399196 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
LINC00243-201ENST00000399196 MT1BP07438 61 aa3.98□□□□□ -1.77
LINC00243-201ENST00000399196 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
LINC00243-201ENST00000399196 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
LINC00243-201ENST00000399196 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
LINC00243-201ENST00000399196 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
LINC00243-201ENST00000399196 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
LINC00243-201ENST00000399196 TNP1P09430 55 aa3.9□□□□□ -1.79
LINC00243-201ENST00000399196 MT1XP80297 61 aa3.88□□□□□ -1.79
LINC00243-201ENST00000399196 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
LINC00243-201ENST00000399196 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
LINC00243-201ENST00000399196 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
LINC00243-201ENST00000399196 INE1O15225 51 aa3.81□□□□□ -1.8
LINC00243-201ENST00000399196 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
LINC00243-201ENST00000399196 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
LINC00243-201ENST00000399196 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
LINC00243-201ENST00000399196 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
LINC00243-201ENST00000399196 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
LINC00243-201ENST00000399196 KRTAP10-12P60413 245 aa3.71□□□□□ -1.82
LINC00243-201ENST00000399196 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
LINC00243-201ENST00000399196 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
LINC00243-201ENST00000399196 KMT2DO14686 5537 aa3.67□□□□□ -1.82
LINC00243-201ENST00000399196 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
LINC00243-201ENST00000399196 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
LINC00243-201ENST00000399196 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
LINC00243-201ENST00000399196 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
LINC00243-201ENST00000399196 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
LINC00243-201ENST00000399196 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms