RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 LPAP08519 4548 aa6.22□□□□□ -1.41
RCC1-204ENST00000398958 TNXBP22105 4242 aa6.2□□□□□ -1.42
RCC1-204ENST00000398958 H0YAA0 97 aa6.16□□□□□ -1.42
RCC1-204ENST00000398958 A8MUU9 505 aa6.15□□□□□ -1.43
RCC1-204ENST00000398958 LRP2P98164 4655 aa6.14□□□□□ -1.43
RCC1-204ENST00000398958 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
RCC1-204ENST00000398958 MUC2Q02817 5179 aa6.12□□□□□ -1.43
RCC1-204ENST00000398958 HERC2O95714 4834 aa6.12□□□□□ -1.43
RCC1-204ENST00000398958 A0A1B0GU33 70 aa6.09□□□□□ -1.43
RCC1-204ENST00000398958 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
RCC1-204ENST00000398958 HERC1Q15751 4861 aa6.07□□□□□ -1.44
RCC1-204ENST00000398958 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
RCC1-204ENST00000398958 ROMO1P60602 79 aa6.05□□□□□ -1.44
RCC1-204ENST00000398958 J3QL48 77 aa6.04□□□□□ -1.44
RCC1-204ENST00000398958 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
RCC1-204ENST00000398958 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
RCC1-204ENST00000398958 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
RCC1-204ENST00000398958 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
RCC1-204ENST00000398958 K7ERS5 55 aa5.98□□□□□ -1.45
RCC1-204ENST00000398958 KRTAP10-8P60410 259 aa5.98□□□□□ -1.45
RCC1-204ENST00000398958 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
RCC1-204ENST00000398958 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
RCC1-204ENST00000398958 COX6B2Q6YFQ2 88 aa5.94□□□□□ -1.46
RCC1-204ENST00000398958 P0C880 135 aa5.92□□□□□ -1.46
RCC1-204ENST00000398958 RNF213Q63HN8 5207 aa5.9□□□□□ -1.46
RCC1-204ENST00000398958 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
RCC1-204ENST00000398958 XP32Q5T750 250 aa5.86□□□□□ -1.47
RCC1-204ENST00000398958 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
RCC1-204ENST00000398958 A0A0D9SG42 100 aa5.82□□□□□ -1.48
RCC1-204ENST00000398958 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
RCC1-204ENST00000398958 KRTAP3-2Q9BYR7 98 aa5.81□□□□□ -1.48
RCC1-204ENST00000398958 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
RCC1-204ENST00000398958 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
RCC1-204ENST00000398958 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
RCC1-204ENST00000398958 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
RCC1-204ENST00000398958 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
RCC1-204ENST00000398958 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
RCC1-204ENST00000398958 C10orf95Q9H7T3 257 aa5.76□□□□□ -1.49
RCC1-204ENST00000398958 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
RCC1-204ENST00000398958 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
RCC1-204ENST00000398958 S4R3F8 94 aa5.65□□□□□ -1.51
RCC1-204ENST00000398958 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
RCC1-204ENST00000398958 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
RCC1-204ENST00000398958 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
RCC1-204ENST00000398958 HMCN2Q8NDA2 5059 aa5.61□□□□□ -1.51
RCC1-204ENST00000398958 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
RCC1-204ENST00000398958 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
RCC1-204ENST00000398958 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
RCC1-204ENST00000398958 M0QZ58 72 aa5.42□□□□□ -1.54
RCC1-204ENST00000398958 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
RCC1-204ENST00000398958 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.55
RCC1-204ENST00000398958 M0R2T5 61 aa5.3□□□□□ -1.56
RCC1-204ENST00000398958 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
RCC1-204ENST00000398958 R4GN34 69 aa5.28□□□□□ -1.56
RCC1-204ENST00000398958 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
RCC1-204ENST00000398958 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
RCC1-204ENST00000398958 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
RCC1-204ENST00000398958 USH2AO75445 5202 aa5.18□□□□□ -1.58
RCC1-204ENST00000398958 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
RCC1-204ENST00000398958 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
RCC1-204ENST00000398958 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
RCC1-204ENST00000398958 MT1HP80294 61 aa5.04□□□□□ -1.6
RCC1-204ENST00000398958 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
RCC1-204ENST00000398958 LCE2BO14633 110 aa5□□□□□ -1.61
RCC1-204ENST00000398958 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
RCC1-204ENST00000398958 MT1FP04733 61 aa4.93□□□□□ -1.62
RCC1-204ENST00000398958 KMT2DO14686 5537 aa4.9□□□□□ -1.63
RCC1-204ENST00000398958 MT2AP02795 61 aa4.88□□□□□ -1.63
RCC1-204ENST00000398958 TNP1P09430 55 aa4.88□□□□□ -1.63
RCC1-204ENST00000398958 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
RCC1-204ENST00000398958 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
RCC1-204ENST00000398958 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
RCC1-204ENST00000398958 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
RCC1-204ENST00000398958 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
RCC1-204ENST00000398958 PRO2289Q9P1D8 64 aa4.71□□□□□ -1.66
RCC1-204ENST00000398958 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
RCC1-204ENST00000398958 MT1BP07438 61 aa4.6□□□□□ -1.67
RCC1-204ENST00000398958 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
RCC1-204ENST00000398958 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
RCC1-204ENST00000398958 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
RCC1-204ENST00000398958 MT1XP80297 61 aa4.52□□□□□ -1.69
RCC1-204ENST00000398958 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
RCC1-204ENST00000398958 INE1O15225 51 aa4.5□□□□□ -1.69
RCC1-204ENST00000398958 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
RCC1-204ENST00000398958 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
RCC1-204ENST00000398958 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
RCC1-204ENST00000398958 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
RCC1-204ENST00000398958 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
RCC1-204ENST00000398958 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
RCC1-204ENST00000398958 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
RCC1-204ENST00000398958 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
RCC1-204ENST00000398958 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
RCC1-204ENST00000398958 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
RCC1-204ENST00000398958 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
RCC1-204ENST00000398958 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
RCC1-204ENST00000398958 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
RCC1-204ENST00000398958 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
RCC1-204ENST00000398958 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
RCC1-204ENST00000398958 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
RCC1-204ENST00000398958 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms