RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IGKV2-30P06310 120 aa2.85□□□□□ -1.95
SSR1-202ENST00000397511 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
SSR1-202ENST00000397511 P0C880 135 aa2.84□□□□□ -1.95
SSR1-202ENST00000397511 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
SSR1-202ENST00000397511 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
SSR1-202ENST00000397511 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
SSR1-202ENST00000397511 SPINK1P00995 79 aa2.82□□□□□ -1.96
SSR1-202ENST00000397511 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
SSR1-202ENST00000397511 SACSQ9NZJ4 4579 aa2.81□□□□□ -1.96
SSR1-202ENST00000397511 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
SSR1-202ENST00000397511 H0YAA0 97 aa2.81□□□□□ -1.96
SSR1-202ENST00000397511 K7ERS5 55 aa2.81□□□□□ -1.96
SSR1-202ENST00000397511 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
SSR1-202ENST00000397511 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
SSR1-202ENST00000397511 C9orf92A6NGG3 77 aa2.8□□□□□ -1.96
SSR1-202ENST00000397511 Q6ZSA8 131 aa2.8□□□□□ -1.96
SSR1-202ENST00000397511 Q8N1X5 172 aa2.8□□□□□ -1.96
SSR1-202ENST00000397511 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
SSR1-202ENST00000397511 CRIPTQ9P021 101 aa2.79□□□□□ -1.96
SSR1-202ENST00000397511 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.96
SSR1-202ENST00000397511 A0A1B0GU33 70 aa2.78□□□□□ -1.96
SSR1-202ENST00000397511 KRTAP23-1A1A580 65 aa2.78□□□□□ -1.96
SSR1-202ENST00000397511 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
SSR1-202ENST00000397511 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
SSR1-202ENST00000397511 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
SSR1-202ENST00000397511 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
SSR1-202ENST00000397511 C20orf166-AS1Q96NR2 134 aa2.76□□□□□ -1.97
SSR1-202ENST00000397511 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
SSR1-202ENST00000397511 FLG2Q5D862 2391 aaPredicted RBP2.75□□□□□ -1.97
SSR1-202ENST00000397511 DMBT1Q9UGM3 2413 aaPredicted RBP2.75□□□□□ -1.97
SSR1-202ENST00000397511 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
SSR1-202ENST00000397511 PKHD1L1Q86WI1 4243 aa2.71□□□□□ -1.98
SSR1-202ENST00000397511 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
SSR1-202ENST00000397511 KRTAP15-1Q3LI76 137 aa2.7□□□□□ -1.98
SSR1-202ENST00000397511 RYR2Q92736 4967 aa2.7□□□□□ -1.98
SSR1-202ENST00000397511 HSPG2P98160 4391 aa2.7□□□□□ -1.98
SSR1-202ENST00000397511 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
SSR1-202ENST00000397511 KRTAP4-5Q9BYR2 181 aa2.7□□□□□ -1.98
SSR1-202ENST00000397511 LPAP08519 4548 aa2.69□□□□□ -1.98
SSR1-202ENST00000397511 RYR3Q15413 4870 aa2.69□□□□□ -1.98
SSR1-202ENST00000397511 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
SSR1-202ENST00000397511 COX6B2Q6YFQ2 88 aa2.67□□□□□ -1.98
SSR1-202ENST00000397511 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
SSR1-202ENST00000397511 KRTAP3-1Q9BYR8 98 aa2.66□□□□□ -1.98
SSR1-202ENST00000397511 KIAA1109Q2LD37 5005 aa2.66□□□□□ -1.98
SSR1-202ENST00000397511 RYR1P21817 5038 aa2.65□□□□□ -1.99
SSR1-202ENST00000397511 A0A1B0GVY2 172 aa2.64□□□□□ -1.99
SSR1-202ENST00000397511 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
SSR1-202ENST00000397511 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
SSR1-202ENST00000397511 TNXBP22105 4242 aa2.64□□□□□ -1.99
SSR1-202ENST00000397511 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
SSR1-202ENST00000397511 ABCA13Q86UQ4 5058 aa2.63□□□□□ -1.99
SSR1-202ENST00000397511 LRP2P98164 4655 aa2.62□□□□□ -1.99
SSR1-202ENST00000397511 A0A0D9SG42 100 aa2.61□□□□□ -1.99
SSR1-202ENST00000397511 RPS29P62273 56 aaKnown RBP2.61□□□□□ -1.99
SSR1-202ENST00000397511 EPPK1P58107 5090 aaKnown RBP2.61□□□□□ -1.99
SSR1-202ENST00000397511 Q5VSD8 79 aa2.61□□□□□ -1.99
SSR1-202ENST00000397511 KRTAP9-7A8MTY7 169 aa2.59□□□□□ -1.99
SSR1-202ENST00000397511 KRTAP10-8P60410 259 aa2.58□□□□□ -2
SSR1-202ENST00000397511 MUC2Q02817 5179 aa2.57□□□□□ -2
SSR1-202ENST00000397511 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
SSR1-202ENST00000397511 S4R3F8 94 aa2.56□□□□□ -2
SSR1-202ENST00000397511 KRTAP10-6P60371 365 aaPredicted RBP2.56□□□□□ -2
SSR1-202ENST00000397511 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
SSR1-202ENST00000397511 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
SSR1-202ENST00000397511 MT1HL1P0DM35 61 aa2.49□□□□□ -2.01
SSR1-202ENST00000397511 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
SSR1-202ENST00000397511 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
SSR1-202ENST00000397511 KRTAP9-3Q9BYQ3 159 aa2.45□□□□□ -2.02
SSR1-202ENST00000397511 HERC2O95714 4834 aa2.43□□□□□ -2.02
SSR1-202ENST00000397511 M0QZ58 72 aa2.43□□□□□ -2.02
SSR1-202ENST00000397511 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
SSR1-202ENST00000397511 HERC1Q15751 4861 aa2.4□□□□□ -2.02
SSR1-202ENST00000397511 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
SSR1-202ENST00000397511 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
SSR1-202ENST00000397511 R4GN34 69 aa2.38□□□□□ -2.03
SSR1-202ENST00000397511 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
SSR1-202ENST00000397511 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
SSR1-202ENST00000397511 KRTAP19-4Q3LI73 84 aa2.37□□□□□ -2.03
SSR1-202ENST00000397511 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
SSR1-202ENST00000397511 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
SSR1-202ENST00000397511 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
SSR1-202ENST00000397511 UBR4Q5T4S7 5183 aa2.31□□□□□ -2.04
SSR1-202ENST00000397511 HMCN2Q8NDA2 5059 aa2.28□□□□□ -2.04
SSR1-202ENST00000397511 BIRC6Q9NR09 4857 aa2.26□□□□□ -2.05
SSR1-202ENST00000397511 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
SSR1-202ENST00000397511 FLGP20930 4061 aaPredicted RBP2.24□□□□□ -2.05
SSR1-202ENST00000397511 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
SSR1-202ENST00000397511 INE1O15225 51 aa2.23□□□□□ -2.05
SSR1-202ENST00000397511 M0R2T5 61 aa2.21□□□□□ -2.06
SSR1-202ENST00000397511 TNP1P09430 55 aa2.18□□□□□ -2.06
SSR1-202ENST00000397511 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
SSR1-202ENST00000397511 USH2AO75445 5202 aa2.16□□□□□ -2.06
SSR1-202ENST00000397511 KRTAP10-10P60014 251 aa2.12□□□□□ -2.07
SSR1-202ENST00000397511 KMT2DO14686 5537 aa2.11□□□□□ -2.07
SSR1-202ENST00000397511 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
SSR1-202ENST00000397511 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
SSR1-202ENST00000397511 MT1HP80294 61 aa2.1□□□□□ -2.07
SSR1-202ENST00000397511 MT1FP04733 61 aa2.08□□□□□ -2.08
SSR1-202ENST00000397511 FSIP2Q5CZC0 6907 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms