RNA–Protein interactions for RNA: ENST00000397128.6

PRKAA1-204, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAA1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-204ENST00000397128 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
PRKAA1-204ENST00000397128 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
PRKAA1-204ENST00000397128 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
PRKAA1-204ENST00000397128 LRP1BQ9NZR2 4599 aa2.74□□□□□ -1.97
PRKAA1-204ENST00000397128 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
PRKAA1-204ENST00000397128 RYR2Q92736 4967 aa2.73□□□□□ -1.97
PRKAA1-204ENST00000397128 LOC100996750A0A140TA64 210 aa2.73□□□□□ -1.97
PRKAA1-204ENST00000397128 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
PRKAA1-204ENST00000397128 SACSQ9NZJ4 4579 aa2.73□□□□□ -1.97
PRKAA1-204ENST00000397128 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
PRKAA1-204ENST00000397128 H0YAA0 97 aa2.71□□□□□ -1.98
PRKAA1-204ENST00000397128 PLAC4Q8WY50 150 aa2.71□□□□□ -1.98
PRKAA1-204ENST00000397128 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
PRKAA1-204ENST00000397128 HYDINQ4G0P3 5121 aa2.7□□□□□ -1.98
PRKAA1-204ENST00000397128 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
PRKAA1-204ENST00000397128 KRTAP3-1Q9BYR8 98 aa2.68□□□□□ -1.98
PRKAA1-204ENST00000397128 PRAC1Q96KF2 57 aa2.68□□□□□ -1.98
PRKAA1-204ENST00000397128 KRTAP3-3Q9BYR6 98 aa2.67□□□□□ -1.98
PRKAA1-204ENST00000397128 KRTAP3-2Q9BYR7 98 aa2.67□□□□□ -1.98
PRKAA1-204ENST00000397128 APOBP04114 4563 aaKnown RBP2.66□□□□□ -1.98
PRKAA1-204ENST00000397128 ROMO1P60602 79 aa2.66□□□□□ -1.98
PRKAA1-204ENST00000397128 RYR1P21817 5038 aa2.65□□□□□ -1.98
PRKAA1-204ENST00000397128 TNXBP22105 4242 aa2.65□□□□□ -1.99
PRKAA1-204ENST00000397128 HSPG2P98160 4391 aa2.62□□□□□ -1.99
PRKAA1-204ENST00000397128 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
PRKAA1-204ENST00000397128 BIRC6Q9NR09 4857 aa2.61□□□□□ -1.99
PRKAA1-204ENST00000397128 P0C880 135 aa2.6□□□□□ -1.99
PRKAA1-204ENST00000397128 FAT1Q14517 4588 aa2.59□□□□□ -1.99
PRKAA1-204ENST00000397128 A0A0A0MQY5 61 aa2.58□□□□□ -2
PRKAA1-204ENST00000397128 RYR3Q15413 4870 aa2.57□□□□□ -2
PRKAA1-204ENST00000397128 LPAP08519 4548 aa2.57□□□□□ -2
PRKAA1-204ENST00000397128 LRP1Q07954 4544 aaKnown RBP2.56□□□□□ -2
PRKAA1-204ENST00000397128 TNP1P09430 55 aa2.54□□□□□ -2
PRKAA1-204ENST00000397128 KRTAP10-6P60371 365 aaPredicted RBP2.54□□□□□ -2
PRKAA1-204ENST00000397128 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
PRKAA1-204ENST00000397128 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
PRKAA1-204ENST00000397128 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
PRKAA1-204ENST00000397128 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
PRKAA1-204ENST00000397128 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
PRKAA1-204ENST00000397128 KRTAP4-1Q9BYQ7 146 aa2.51□□□□□ -2.01
PRKAA1-204ENST00000397128 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
PRKAA1-204ENST00000397128 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
PRKAA1-204ENST00000397128 HERC2O95714 4834 aa2.48□□□□□ -2.01
PRKAA1-204ENST00000397128 HERC1Q15751 4861 aa2.46□□□□□ -2.02
PRKAA1-204ENST00000397128 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
PRKAA1-204ENST00000397128 MT1HP80294 61 aa2.46□□□□□ -2.02
PRKAA1-204ENST00000397128 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
PRKAA1-204ENST00000397128 KRTAP15-1Q3LI76 137 aa2.44□□□□□ -2.02
PRKAA1-204ENST00000397128 MUC17Q685J3 4493 aa2.41□□□□□ -2.02
PRKAA1-204ENST00000397128 LUZP6Q538Z0 58 aa2.41□□□□□ -2.02
PRKAA1-204ENST00000397128 EPPK1P58107 5090 aaKnown RBP2.4□□□□□ -2.02
PRKAA1-204ENST00000397128 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
PRKAA1-204ENST00000397128 MT2AP02795 61 aa2.38□□□□□ -2.03
PRKAA1-204ENST00000397128 SPRR2GQ9BYE4 73 aa2.38□□□□□ -2.03
PRKAA1-204ENST00000397128 KRTAP23-1A1A580 65 aa2.35□□□□□ -2.03
PRKAA1-204ENST00000397128 LORP23490 312 aaPredicted RBP2.35□□□□□ -2.03
PRKAA1-204ENST00000397128 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.03
PRKAA1-204ENST00000397128 LCE2CQ5TA81 110 aa2.34□□□□□ -2.03
PRKAA1-204ENST00000397128 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
PRKAA1-204ENST00000397128 LRP2P98164 4655 aa2.33□□□□□ -2.04
PRKAA1-204ENST00000397128 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
PRKAA1-204ENST00000397128 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
PRKAA1-204ENST00000397128 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.32□□□□□ -2.04
PRKAA1-204ENST00000397128 MT1FP04733 61 aa2.32□□□□□ -2.04
PRKAA1-204ENST00000397128 KRTAP4-8Q9BYQ9 185 aa2.32□□□□□ -2.04
PRKAA1-204ENST00000397128 LCE2BO14633 110 aa2.31□□□□□ -2.04
PRKAA1-204ENST00000397128 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
PRKAA1-204ENST00000397128 KRTAP10-12P60413 245 aa2.27□□□□□ -2.05
PRKAA1-204ENST00000397128 KRTAP9-8Q9BYQ0 159 aa2.27□□□□□ -2.05
PRKAA1-204ENST00000397128 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
PRKAA1-204ENST00000397128 KRTAP19-1Q8IUB9 90 aa2.25□□□□□ -2.05
PRKAA1-204ENST00000397128 KRTAP9-2Q9BYQ4 174 aa2.24□□□□□ -2.05
PRKAA1-204ENST00000397128 NDUFAF8A1L188 74 aa2.24□□□□□ -2.05
PRKAA1-204ENST00000397128 KRTAP19-4Q3LI73 84 aa2.22□□□□□ -2.05
PRKAA1-204ENST00000397128 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
PRKAA1-204ENST00000397128 HMCN2Q8NDA2 5059 aa2.22□□□□□ -2.05
PRKAA1-204ENST00000397128 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
PRKAA1-204ENST00000397128 MUC2Q02817 5179 aa2.18□□□□□ -2.06
PRKAA1-204ENST00000397128 MT1BP07438 61 aa2.18□□□□□ -2.06
PRKAA1-204ENST00000397128 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
PRKAA1-204ENST00000397128 KRTAP9-4Q9BYQ2 154 aa2.18□□□□□ -2.06
PRKAA1-204ENST00000397128 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
PRKAA1-204ENST00000397128 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
PRKAA1-204ENST00000397128 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
PRKAA1-204ENST00000397128 KRTAP9-6A0A140TA67 174 aa2.16□□□□□ -2.06
PRKAA1-204ENST00000397128 RNF213Q63HN8 5207 aa2.15□□□□□ -2.06
PRKAA1-204ENST00000397128 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
PRKAA1-204ENST00000397128 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
PRKAA1-204ENST00000397128 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
PRKAA1-204ENST00000397128 MT1XP80297 61 aa2.14□□□□□ -2.07
PRKAA1-204ENST00000397128 KRTAP4-8A0A0G2JLE6 195 aa2.11□□□□□ -2.07
PRKAA1-204ENST00000397128 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
PRKAA1-204ENST00000397128 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
PRKAA1-204ENST00000397128 KRTAP4-7Q9BYR0 210 aa2.08□□□□□ -2.08
PRKAA1-204ENST00000397128 UBR4Q5T4S7 5183 aa2.06□□□□□ -2.08
PRKAA1-204ENST00000397128 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
PRKAA1-204ENST00000397128 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
PRKAA1-204ENST00000397128 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
PRKAA1-204ENST00000397128 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
PRKAA1-204ENST00000397128 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms