RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 FAM236AA0A1B0GUQ0 79 aa9.77□□□□□ -0.85
SEC13-207ENST00000397105 FAM236BA0A1B0GV22 79 aa9.77□□□□□ -0.85
SEC13-207ENST00000397105 LCE2BO14633 110 aa9.75□□□□□ -0.85
SEC13-207ENST00000397105 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
SEC13-207ENST00000397105 TRAV7A0A075B6U4 112 aa9.73□□□□□ -0.85
SEC13-207ENST00000397105 SSPOA2VEC9 5147 aa9.72□□□□□ -0.85
SEC13-207ENST00000397105 NDUFC1O43677 76 aa9.68□□□□□ -0.86
SEC13-207ENST00000397105 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
SEC13-207ENST00000397105 SERP2Q8N6R1 65 aa9.51□□□□□ -0.89
SEC13-207ENST00000397105 H0YAA0 97 aa9.48□□□□□ -0.89
SEC13-207ENST00000397105 KRTAP19-1Q8IUB9 90 aa9.48□□□□□ -0.89
SEC13-207ENST00000397105 SNURFQ9Y675 71 aa9.48□□□□□ -0.89
SEC13-207ENST00000397105 ACYP2P14621 99 aa9.44□□□□□ -0.9
SEC13-207ENST00000397105 SPRR2GQ9BYE4 73 aa9.44□□□□□ -0.9
SEC13-207ENST00000397105 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
SEC13-207ENST00000397105 C20orf197Q8N268 126 aa9.43□□□□□ -0.9
SEC13-207ENST00000397105 FCGBPQ9Y6R7 5405 aaPredicted RBP9.42□□□□□ -0.9
SEC13-207ENST00000397105 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
SEC13-207ENST00000397105 KRTAP19-6Q3LI70 58 aa9.37□□□□□ -0.91
SEC13-207ENST00000397105 SPANXA2-OT1Q8N9U9 137 aa9.33□□□□□ -0.92
SEC13-207ENST00000397105 KRTAP19-8Q3LI54 63 aa9.32□□□□□ -0.92
SEC13-207ENST00000397105 Q5VV11 94 aa9.32□□□□□ -0.92
SEC13-207ENST00000397105 COX7CP15954 63 aa9.29□□□□□ -0.92
SEC13-207ENST00000397105 SPTSSBQ8NFR3 76 aa9.29□□□□□ -0.92
SEC13-207ENST00000397105 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
SEC13-207ENST00000397105 MT1BP07438 61 aa9.25□□□□□ -0.93
SEC13-207ENST00000397105 P0C880 135 aa9.2□□□□□ -0.94
SEC13-207ENST00000397105 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
SEC13-207ENST00000397105 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
SEC13-207ENST00000397105 R4GN34 69 aa9.15□□□□□ -0.94
SEC13-207ENST00000397105 ANAPC13Q9BS18 74 aa9.13□□□□□ -0.95
SEC13-207ENST00000397105 A6NN06 94 aa9.08□□□□□ -0.96
SEC13-207ENST00000397105 M0QZ58 72 aa9.08□□□□□ -0.96
SEC13-207ENST00000397105 MACF1Q9UPN3 7388 aaKnown RBP9.07□□□□□ -0.96
SEC13-207ENST00000397105 H7BZZ5 65 aa9.07□□□□□ -0.96
SEC13-207ENST00000397105 CYSTM1Q9H1C7 97 aa9.05□□□□□ -0.96
SEC13-207ENST00000397105 COA5Q86WW8 74 aa9.03□□□□□ -0.96
SEC13-207ENST00000397105 KRTAP10-5P60370 271 aa9□□□□□ -0.97
SEC13-207ENST00000397105 KRTAP9-7A8MTY7 169 aa8.98□□□□□ -0.97
SEC13-207ENST00000397105 PLAC4Q8WY50 150 aa8.97□□□□□ -0.97
SEC13-207ENST00000397105 SYNE2Q8WXH0 6885 aaKnown RBP8.96□□□□□ -0.98
SEC13-207ENST00000397105 LINC01554Q52M75 96 aa8.93□□□□□ -0.98
SEC13-207ENST00000397105 CCDC179H3BU77 68 aa8.91□□□□□ -0.98
SEC13-207ENST00000397105 SEC61GP60059 68 aa8.83□□□□□ -1
SEC13-207ENST00000397105 PRO2289Q9P1D8 64 aa8.83□□□□□ -1
SEC13-207ENST00000397105 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
SEC13-207ENST00000397105 MT1XP80297 61 aa8.77□□□□□ -1.01
SEC13-207ENST00000397105 ATP5EP56381 51 aaPredicted RBP8.74□□□□□ -1.01
SEC13-207ENST00000397105 KRTAP6-3Q3LI67 103 aa8.72□□□□□ -1.01
SEC13-207ENST00000397105 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
SEC13-207ENST00000397105 A0A1B0GU33 70 aa8.62□□□□□ -1.03
SEC13-207ENST00000397105 TMEM258P61165 79 aa8.62□□□□□ -1.03
SEC13-207ENST00000397105 A0A1B0GU69 56 aa8.6□□□□□ -1.03
SEC13-207ENST00000397105 SPATA8Q6RVD6 105 aa8.53□□□□□ -1.04
SEC13-207ENST00000397105 A0A0D9SG42 100 aa8.51□□□□□ -1.05
SEC13-207ENST00000397105 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
SEC13-207ENST00000397105 KMT2DO14686 5537 aa8.48□□□□□ -1.05
SEC13-207ENST00000397105 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
SEC13-207ENST00000397105 PRR15LQ9BU68 103 aa8.46□□□□□ -1.06
SEC13-207ENST00000397105 MUC12Q9UKN1 5478 aa8.46□□□□□ -1.06
SEC13-207ENST00000397105 KRTAP5-9P26371 169 aa8.43□□□□□ -1.06
SEC13-207ENST00000397105 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
SEC13-207ENST00000397105 NEBP20929 6669 aa8.4□□□□□ -1.06
SEC13-207ENST00000397105 SMIM26A0A096LP01 95 aa8.39□□□□□ -1.07
SEC13-207ENST00000397105 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
SEC13-207ENST00000397105 KRTAP10-7P60409 375 aaPredicted RBP8.36□□□□□ -1.07
SEC13-207ENST00000397105 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
SEC13-207ENST00000397105 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
SEC13-207ENST00000397105 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
SEC13-207ENST00000397105 MDN1Q9NU22 5596 aa8.3□□□□□ -1.08
SEC13-207ENST00000397105 KRTAP4-8A0A0G2JLE6 195 aa8.28□□□□□ -1.08
SEC13-207ENST00000397105 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
SEC13-207ENST00000397105 A8MU10 97 aa8.27□□□□□ -1.09
SEC13-207ENST00000397105 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.09
SEC13-207ENST00000397105 UQCR11O14957 56 aa8.16□□□□□ -1.1
SEC13-207ENST00000397105 V9GYY9 64 aa8.14□□□□□ -1.11
SEC13-207ENST00000397105 PCP4P48539 62 aa8.1□□□□□ -1.11
SEC13-207ENST00000397105 SPRR2EP22531 72 aa8.07□□□□□ -1.12
SEC13-207ENST00000397105 SPRR2BP35325 72 aa8.07□□□□□ -1.12
SEC13-207ENST00000397105 SPRR2AP35326 72 aa8.07□□□□□ -1.12
SEC13-207ENST00000397105 Q1T7F1 81 aa8.06□□□□□ -1.12
SEC13-207ENST00000397105 PSPHP1O15172 72 aa8.01□□□□□ -1.13
SEC13-207ENST00000397105 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
SEC13-207ENST00000397105 LCE1AQ5T7P2 110 aa7.99□□□□□ -1.13
SEC13-207ENST00000397105 LOC100996750A0A140TA64 210 aa7.97□□□□□ -1.13
SEC13-207ENST00000397105 KRTAP4-6Q9BYQ5 205 aa7.97□□□□□ -1.13
SEC13-207ENST00000397105 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
SEC13-207ENST00000397105 RPS28P62857 69 aaKnown RBP7.93□□□□□ -1.14
SEC13-207ENST00000397105 KRTAP20-1Q3LI63 56 aa7.93□□□□□ -1.14
SEC13-207ENST00000397105 TNP1P09430 55 aa7.89□□□□□ -1.15
SEC13-207ENST00000397105 K7ERS5 55 aa7.83□□□□□ -1.16
SEC13-207ENST00000397105 KRTAP2-3P0C7H8 128 aa7.82□□□□□ -1.16
SEC13-207ENST00000397105 KRTAP19-7Q3SYF9 63 aa7.82□□□□□ -1.16
SEC13-207ENST00000397105 KRTAP2-4Q9BYR9 128 aa7.82□□□□□ -1.16
SEC13-207ENST00000397105 SPRR2DP22532 72 aa7.8□□□□□ -1.16
SEC13-207ENST00000397105 A6NED7 52 aa7.77□□□□□ -1.17
SEC13-207ENST00000397105 MT1EP04732 61 aa7.75□□□□□ -1.17
SEC13-207ENST00000397105 KRTAP19-5Q3LI72 72 aa7.73□□□□□ -1.17
SEC13-207ENST00000397105 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
SEC13-207ENST00000397105 KRTAP19-3Q7Z4W3 81 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms