RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TNXBP22105 4242 aa7.62□□□□□ -1.19
CCHCR1-203ENST00000396268 RPS29P62273 56 aaKnown RBP7.6□□□□□ -1.19
CCHCR1-203ENST00000396268 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.19
CCHCR1-203ENST00000396268 A0A1B0GU33 70 aa7.55□□□□□ -1.2
CCHCR1-203ENST00000396268 A8MUU9 505 aa7.55□□□□□ -1.2
CCHCR1-203ENST00000396268 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
CCHCR1-203ENST00000396268 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
CCHCR1-203ENST00000396268 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
CCHCR1-203ENST00000396268 ROMO1P60602 79 aa7.52□□□□□ -1.21
CCHCR1-203ENST00000396268 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
CCHCR1-203ENST00000396268 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
CCHCR1-203ENST00000396268 H1FX-AS1Q4G0G2 97 aa7.46□□□□□ -1.22
CCHCR1-203ENST00000396268 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
CCHCR1-203ENST00000396268 A0A0D9SG42 100 aa7.39□□□□□ -1.23
CCHCR1-203ENST00000396268 COX6B2Q6YFQ2 88 aa7.38□□□□□ -1.23
CCHCR1-203ENST00000396268 BIRC6Q9NR09 4857 aa7.37□□□□□ -1.23
CCHCR1-203ENST00000396268 P0C880 135 aa7.37□□□□□ -1.23
CCHCR1-203ENST00000396268 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
CCHCR1-203ENST00000396268 HERC2O95714 4834 aa7.35□□□□□ -1.23
CCHCR1-203ENST00000396268 K7ERS5 55 aa7.35□□□□□ -1.23
CCHCR1-203ENST00000396268 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
CCHCR1-203ENST00000396268 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
CCHCR1-203ENST00000396268 LPAP08519 4548 aa7.26□□□□□ -1.25
CCHCR1-203ENST00000396268 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
CCHCR1-203ENST00000396268 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
CCHCR1-203ENST00000396268 PCLOQ9Y6V0 5065 aa7.22□□□□□ -1.25
CCHCR1-203ENST00000396268 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
CCHCR1-203ENST00000396268 LRP2P98164 4655 aa7.2□□□□□ -1.26
CCHCR1-203ENST00000396268 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
CCHCR1-203ENST00000396268 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
CCHCR1-203ENST00000396268 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
CCHCR1-203ENST00000396268 S4R3F8 94 aa7.15□□□□□ -1.27
CCHCR1-203ENST00000396268 XP32Q5T750 250 aa7.14□□□□□ -1.27
CCHCR1-203ENST00000396268 HERC1Q15751 4861 aa7.12□□□□□ -1.27
CCHCR1-203ENST00000396268 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
CCHCR1-203ENST00000396268 J3QL48 77 aa7.05□□□□□ -1.28
CCHCR1-203ENST00000396268 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
CCHCR1-203ENST00000396268 LUZP6Q538Z0 58 aa6.93□□□□□ -1.3
CCHCR1-203ENST00000396268 MUC2Q02817 5179 aa6.93□□□□□ -1.3
CCHCR1-203ENST00000396268 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
CCHCR1-203ENST00000396268 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.31
CCHCR1-203ENST00000396268 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
CCHCR1-203ENST00000396268 MUC17Q685J3 4493 aa6.82□□□□□ -1.32
CCHCR1-203ENST00000396268 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
CCHCR1-203ENST00000396268 M0QZ58 72 aa6.78□□□□□ -1.32
CCHCR1-203ENST00000396268 UBR4Q5T4S7 5183 aa6.73□□□□□ -1.33
CCHCR1-203ENST00000396268 RNF213Q63HN8 5207 aa6.72□□□□□ -1.33
CCHCR1-203ENST00000396268 R4GN34 69 aa6.69□□□□□ -1.34
CCHCR1-203ENST00000396268 SEC61BP60468 96 aaKnown RBP6.68□□□□□ -1.34
CCHCR1-203ENST00000396268 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
CCHCR1-203ENST00000396268 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
CCHCR1-203ENST00000396268 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
CCHCR1-203ENST00000396268 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
CCHCR1-203ENST00000396268 FLGP20930 4061 aaPredicted RBP6.48□□□□□ -1.37
CCHCR1-203ENST00000396268 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
CCHCR1-203ENST00000396268 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
CCHCR1-203ENST00000396268 PP632Q6XCG6 107 aa6.21□□□□□ -1.41
CCHCR1-203ENST00000396268 MT1HP80294 61 aa6.2□□□□□ -1.42
CCHCR1-203ENST00000396268 M0R2T5 61 aa6.15□□□□□ -1.42
CCHCR1-203ENST00000396268 TNP1P09430 55 aa6.1□□□□□ -1.43
CCHCR1-203ENST00000396268 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
CCHCR1-203ENST00000396268 MT1FP04733 61 aa5.99□□□□□ -1.45
CCHCR1-203ENST00000396268 MT2AP02795 61 aa5.98□□□□□ -1.45
CCHCR1-203ENST00000396268 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
CCHCR1-203ENST00000396268 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
CCHCR1-203ENST00000396268 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
CCHCR1-203ENST00000396268 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
CCHCR1-203ENST00000396268 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.47
CCHCR1-203ENST00000396268 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
CCHCR1-203ENST00000396268 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
CCHCR1-203ENST00000396268 USH2AO75445 5202 aa5.79□□□□□ -1.48
CCHCR1-203ENST00000396268 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
CCHCR1-203ENST00000396268 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
CCHCR1-203ENST00000396268 MT1BP07438 61 aa5.66□□□□□ -1.5
CCHCR1-203ENST00000396268 LCE2BO14633 110 aa5.64□□□□□ -1.51
CCHCR1-203ENST00000396268 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
CCHCR1-203ENST00000396268 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
CCHCR1-203ENST00000396268 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
CCHCR1-203ENST00000396268 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
CCHCR1-203ENST00000396268 MT1XP80297 61 aa5.53□□□□□ -1.52
CCHCR1-203ENST00000396268 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
CCHCR1-203ENST00000396268 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
CCHCR1-203ENST00000396268 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
CCHCR1-203ENST00000396268 INE1O15225 51 aa5.43□□□□□ -1.54
CCHCR1-203ENST00000396268 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
CCHCR1-203ENST00000396268 KMT2DO14686 5537 aa5.43□□□□□ -1.54
CCHCR1-203ENST00000396268 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
CCHCR1-203ENST00000396268 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
CCHCR1-203ENST00000396268 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
CCHCR1-203ENST00000396268 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
CCHCR1-203ENST00000396268 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.58
CCHCR1-203ENST00000396268 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
CCHCR1-203ENST00000396268 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
CCHCR1-203ENST00000396268 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
CCHCR1-203ENST00000396268 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
CCHCR1-203ENST00000396268 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
CCHCR1-203ENST00000396268 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
CCHCR1-203ENST00000396268 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
CCHCR1-203ENST00000396268 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
CCHCR1-203ENST00000396268 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms