RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 XP32Q5T750 250 aa9.05□□□□□ -0.96
RDH13-202ENST00000396247 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
RDH13-202ENST00000396247 J3QL48 77 aa9.03□□□□□ -0.96
RDH13-202ENST00000396247 UQCR11O14957 56 aa9.02□□□□□ -0.97
RDH13-202ENST00000396247 RPL37P61927 97 aaKnown RBP9.02□□□□□ -0.97
RDH13-202ENST00000396247 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
RDH13-202ENST00000396247 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
RDH13-202ENST00000396247 PRAC1Q96KF2 57 aa8.79□□□□□ -1
RDH13-202ENST00000396247 LPAP08519 4548 aa8.77□□□□□ -1.01
RDH13-202ENST00000396247 LRP2P98164 4655 aa8.76□□□□□ -1.01
RDH13-202ENST00000396247 KRTAP3-1Q9BYR8 98 aa8.76□□□□□ -1.01
RDH13-202ENST00000396247 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
RDH13-202ENST00000396247 ADM2Q7Z4H4 148 aa8.74□□□□□ -1.01
RDH13-202ENST00000396247 PCLOQ9Y6V0 5065 aa8.72□□□□□ -1.01
RDH13-202ENST00000396247 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
RDH13-202ENST00000396247 LINC01554Q52M75 96 aa8.65□□□□□ -1.02
RDH13-202ENST00000396247 H0YAA0 97 aa8.62□□□□□ -1.03
RDH13-202ENST00000396247 A0A1B0GU33 70 aa8.61□□□□□ -1.03
RDH13-202ENST00000396247 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
RDH13-202ENST00000396247 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
RDH13-202ENST00000396247 HERC1Q15751 4861 aa8.55□□□□□ -1.04
RDH13-202ENST00000396247 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
RDH13-202ENST00000396247 S4R3F8 94 aa8.48□□□□□ -1.05
RDH13-202ENST00000396247 HMCN2Q8NDA2 5059 aa8.48□□□□□ -1.05
RDH13-202ENST00000396247 MUC17Q685J3 4493 aa8.46□□□□□ -1.05
RDH13-202ENST00000396247 K7ERS5 55 aa8.44□□□□□ -1.06
RDH13-202ENST00000396247 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
RDH13-202ENST00000396247 KRTAP25-1Q3LHN0 102 aa8.38□□□□□ -1.07
RDH13-202ENST00000396247 KRTAP19-2Q3LHN2 52 aa8.26□□□□□ -1.09
RDH13-202ENST00000396247 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
RDH13-202ENST00000396247 MUC2Q02817 5179 aa8.22□□□□□ -1.09
RDH13-202ENST00000396247 ROMO1P60602 79 aa8.22□□□□□ -1.09
RDH13-202ENST00000396247 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
RDH13-202ENST00000396247 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
RDH13-202ENST00000396247 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
RDH13-202ENST00000396247 A0A0D9SG42 100 aa8.1□□□□□ -1.11
RDH13-202ENST00000396247 P0C880 135 aa8.1□□□□□ -1.11
RDH13-202ENST00000396247 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
RDH13-202ENST00000396247 CRIPTQ9P021 101 aa8.07□□□□□ -1.12
RDH13-202ENST00000396247 RNF213Q63HN8 5207 aa8.06□□□□□ -1.12
RDH13-202ENST00000396247 LCE2CQ5TA81 110 aa8.02□□□□□ -1.12
RDH13-202ENST00000396247 H3BS24 57 aa7.95□□□□□ -1.14
RDH13-202ENST00000396247 M0QZ58 72 aa7.92□□□□□ -1.14
RDH13-202ENST00000396247 KRTAP12-2P59991 146 aa7.91□□□□□ -1.14
RDH13-202ENST00000396247 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
RDH13-202ENST00000396247 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
RDH13-202ENST00000396247 MT1HP80294 61 aa7.86□□□□□ -1.15
RDH13-202ENST00000396247 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
RDH13-202ENST00000396247 R4GN34 69 aa7.83□□□□□ -1.16
RDH13-202ENST00000396247 M0R2T5 61 aa7.82□□□□□ -1.16
RDH13-202ENST00000396247 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
RDH13-202ENST00000396247 C10orf95Q9H7T3 257 aa7.8□□□□□ -1.16
RDH13-202ENST00000396247 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
RDH13-202ENST00000396247 MT2AP02795 61 aa7.59□□□□□ -1.2
RDH13-202ENST00000396247 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.2
RDH13-202ENST00000396247 MT1FP04733 61 aa7.54□□□□□ -1.2
RDH13-202ENST00000396247 KRTAP10-10P60014 251 aa7.54□□□□□ -1.2
RDH13-202ENST00000396247 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
RDH13-202ENST00000396247 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.21
RDH13-202ENST00000396247 NDUFAF8A1L188 74 aa7.45□□□□□ -1.22
RDH13-202ENST00000396247 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
RDH13-202ENST00000396247 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
RDH13-202ENST00000396247 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
RDH13-202ENST00000396247 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
RDH13-202ENST00000396247 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
RDH13-202ENST00000396247 KRTAP19-8Q3LI54 63 aa7.27□□□□□ -1.25
RDH13-202ENST00000396247 MT1BP07438 61 aa7.17□□□□□ -1.26
RDH13-202ENST00000396247 LCE2BO14633 110 aa7.08□□□□□ -1.28
RDH13-202ENST00000396247 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
RDH13-202ENST00000396247 TNP1P09430 55 aa7.05□□□□□ -1.28
RDH13-202ENST00000396247 LUZP6Q538Z0 58 aa7.02□□□□□ -1.29
RDH13-202ENST00000396247 MT1XP80297 61 aa6.97□□□□□ -1.29
RDH13-202ENST00000396247 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
RDH13-202ENST00000396247 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
RDH13-202ENST00000396247 USH2AO75445 5202 aa6.86□□□□□ -1.31
RDH13-202ENST00000396247 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
RDH13-202ENST00000396247 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
RDH13-202ENST00000396247 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
RDH13-202ENST00000396247 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
RDH13-202ENST00000396247 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
RDH13-202ENST00000396247 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
RDH13-202ENST00000396247 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
RDH13-202ENST00000396247 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
RDH13-202ENST00000396247 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
RDH13-202ENST00000396247 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
RDH13-202ENST00000396247 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
RDH13-202ENST00000396247 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
RDH13-202ENST00000396247 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
RDH13-202ENST00000396247 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
RDH13-202ENST00000396247 KMT2DO14686 5537 aa6.37□□□□□ -1.39
RDH13-202ENST00000396247 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.39
RDH13-202ENST00000396247 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
RDH13-202ENST00000396247 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
RDH13-202ENST00000396247 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
RDH13-202ENST00000396247 INE1O15225 51 aa6.13□□□□□ -1.43
RDH13-202ENST00000396247 MT1EP04732 61 aa6.1□□□□□ -1.43
RDH13-202ENST00000396247 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
RDH13-202ENST00000396247 MT1LQ93083 61 aa6□□□□□ -1.45
RDH13-202ENST00000396247 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
RDH13-202ENST00000396247 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms