RNA–Protein interactions for RNA: ENST00000395855.6

NLGN3-203, Transcript of neuroligin 3, humanhuman

TSL 1 (best)

Gene NLGN3, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3-203ENST00000395855 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
NLGN3-203ENST00000395855 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
NLGN3-203ENST00000395855 KRTAP3-1Q9BYR8 98 aa8.71□□□□□ -1.01
NLGN3-203ENST00000395855 PRR15LQ9BU68 103 aa8.7□□□□□ -1.02
NLGN3-203ENST00000395855 Q5VV11 94 aa8.69□□□□□ -1.02
NLGN3-203ENST00000395855 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
NLGN3-203ENST00000395855 H1FX-AS1Q4G0G2 97 aa8.62□□□□□ -1.03
NLGN3-203ENST00000395855 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
NLGN3-203ENST00000395855 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
NLGN3-203ENST00000395855 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
NLGN3-203ENST00000395855 FAT4Q6V0I7 4981 aa8.57□□□□□ -1.04
NLGN3-203ENST00000395855 BRK1Q8WUW1 75 aa8.57□□□□□ -1.04
NLGN3-203ENST00000395855 A0A1B0GU69 56 aa8.53□□□□□ -1.04
NLGN3-203ENST00000395855 PRO0628Q9UI54 55 aa8.51□□□□□ -1.05
NLGN3-203ENST00000395855 S4R3F8 94 aa8.51□□□□□ -1.05
NLGN3-203ENST00000395855 A6NED7 52 aa8.48□□□□□ -1.05
NLGN3-203ENST00000395855 LCA10Q71F78 164 aa8.47□□□□□ -1.05
NLGN3-203ENST00000395855 MT1HP80294 61 aa8.46□□□□□ -1.06
NLGN3-203ENST00000395855 SEC61GP60059 68 aa8.41□□□□□ -1.06
NLGN3-203ENST00000395855 M0R2T5 61 aa8.4□□□□□ -1.06
NLGN3-203ENST00000395855 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
NLGN3-203ENST00000395855 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
NLGN3-203ENST00000395855 A8MU10 97 aa8.36□□□□□ -1.07
NLGN3-203ENST00000395855 CSAG1Q6PB30 78 aa8.35□□□□□ -1.07
NLGN3-203ENST00000395855 SVIPQ8NHG7 77 aa8.34□□□□□ -1.07
NLGN3-203ENST00000395855 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
NLGN3-203ENST00000395855 UQCR11O14957 56 aa8.32□□□□□ -1.08
NLGN3-203ENST00000395855 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
NLGN3-203ENST00000395855 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
NLGN3-203ENST00000395855 A0A1B0GU33 70 aa8.21□□□□□ -1.1
NLGN3-203ENST00000395855 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
NLGN3-203ENST00000395855 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
NLGN3-203ENST00000395855 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.11
NLGN3-203ENST00000395855 H0YAA0 97 aa8.13□□□□□ -1.11
NLGN3-203ENST00000395855 PMAIP1Q13794 54 aa8.12□□□□□ -1.11
NLGN3-203ENST00000395855 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
NLGN3-203ENST00000395855 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.12
NLGN3-203ENST00000395855 MT2AP02795 61 aa8.06□□□□□ -1.12
NLGN3-203ENST00000395855 A6NN06 94 aa8.04□□□□□ -1.12
NLGN3-203ENST00000395855 P0C880 135 aa8.04□□□□□ -1.12
NLGN3-203ENST00000395855 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
NLGN3-203ENST00000395855 MT1FP04733 61 aa8□□□□□ -1.13
NLGN3-203ENST00000395855 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.14
NLGN3-203ENST00000395855 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
NLGN3-203ENST00000395855 M0QZ58 72 aa7.86□□□□□ -1.15
NLGN3-203ENST00000395855 R4GN34 69 aa7.85□□□□□ -1.15
NLGN3-203ENST00000395855 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
NLGN3-203ENST00000395855 A0A0D9SG42 100 aa7.83□□□□□ -1.16
NLGN3-203ENST00000395855 K7ERS5 55 aa7.82□□□□□ -1.16
NLGN3-203ENST00000395855 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
NLGN3-203ENST00000395855 SPRR2GQ9BYE4 73 aa7.77□□□□□ -1.17
NLGN3-203ENST00000395855 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
NLGN3-203ENST00000395855 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
NLGN3-203ENST00000395855 KRTAP12-1P59990 96 aa7.66□□□□□ -1.18
NLGN3-203ENST00000395855 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
NLGN3-203ENST00000395855 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
NLGN3-203ENST00000395855 LCE2BO14633 110 aa7.65□□□□□ -1.18
NLGN3-203ENST00000395855 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
NLGN3-203ENST00000395855 KRTAP19-8Q3LI54 63 aa7.59□□□□□ -1.19
NLGN3-203ENST00000395855 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
NLGN3-203ENST00000395855 USH2AO75445 5202 aa7.55□□□□□ -1.2
NLGN3-203ENST00000395855 ROMO1P60602 79 aa7.54□□□□□ -1.2
NLGN3-203ENST00000395855 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
NLGN3-203ENST00000395855 MT1BP07438 61 aa7.51□□□□□ -1.21
NLGN3-203ENST00000395855 FSIP2Q5CZC0 6907 aa7.5□□□□□ -1.21
NLGN3-203ENST00000395855 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
NLGN3-203ENST00000395855 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
NLGN3-203ENST00000395855 SSPOA2VEC9 5147 aa7.34□□□□□ -1.23
NLGN3-203ENST00000395855 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
NLGN3-203ENST00000395855 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
NLGN3-203ENST00000395855 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
NLGN3-203ENST00000395855 MT1XP80297 61 aa7.21□□□□□ -1.25
NLGN3-203ENST00000395855 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.25
NLGN3-203ENST00000395855 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.25
NLGN3-203ENST00000395855 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
NLGN3-203ENST00000395855 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
NLGN3-203ENST00000395855 KRTAP9-6A0A140TA67 174 aa7.04□□□□□ -1.28
NLGN3-203ENST00000395855 TNP1P09430 55 aa6.97□□□□□ -1.29
NLGN3-203ENST00000395855 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
NLGN3-203ENST00000395855 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
NLGN3-203ENST00000395855 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
NLGN3-203ENST00000395855 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
NLGN3-203ENST00000395855 MACF1Q9UPN3 7388 aaKnown RBP6.81□□□□□ -1.32
NLGN3-203ENST00000395855 KMT2DO14686 5537 aa6.8□□□□□ -1.32
NLGN3-203ENST00000395855 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
NLGN3-203ENST00000395855 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
NLGN3-203ENST00000395855 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
NLGN3-203ENST00000395855 SYNE2Q8WXH0 6885 aaKnown RBP6.68□□□□□ -1.34
NLGN3-203ENST00000395855 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
NLGN3-203ENST00000395855 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
NLGN3-203ENST00000395855 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
NLGN3-203ENST00000395855 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.38
NLGN3-203ENST00000395855 KRTAP6-3Q3LI67 103 aa6.45□□□□□ -1.38
NLGN3-203ENST00000395855 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
NLGN3-203ENST00000395855 KRTAP5-9P26371 169 aa6.43□□□□□ -1.38
NLGN3-203ENST00000395855 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
NLGN3-203ENST00000395855 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
NLGN3-203ENST00000395855 KRTAP12-3P60328 96 aa6.4□□□□□ -1.39
NLGN3-203ENST00000395855 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
NLGN3-203ENST00000395855 MT1EP04732 61 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms