RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 HERC1Q15751 4861 aa5.01□□□□□ -1.61
MSH5-205ENST00000395853 DMBT1Q9UGM3 2413 aaPredicted RBP5.01□□□□□ -1.61
MSH5-205ENST00000395853 A0A1B0GU33 70 aa5.01□□□□□ -1.61
MSH5-205ENST00000395853 IGKV2-30P06310 120 aa5□□□□□ -1.61
MSH5-205ENST00000395853 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
MSH5-205ENST00000395853 SPINK1P00995 79 aa4.98□□□□□ -1.61
MSH5-205ENST00000395853 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
MSH5-205ENST00000395853 ANAPC11Q9NYG5 84 aa4.98□□□□□ -1.61
MSH5-205ENST00000395853 Q5VSD8 79 aa4.97□□□□□ -1.61
MSH5-205ENST00000395853 SPACA4Q8TDM5 124 aa4.96□□□□□ -1.61
MSH5-205ENST00000395853 VPS13BQ7Z7G8 4022 aa4.95□□□□□ -1.62
MSH5-205ENST00000395853 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
MSH5-205ENST00000395853 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
MSH5-205ENST00000395853 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
MSH5-205ENST00000395853 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
MSH5-205ENST00000395853 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
MSH5-205ENST00000395853 MYCBP2O75592 4640 aa4.91□□□□□ -1.62
MSH5-205ENST00000395853 FAT1Q14517 4588 aa4.9□□□□□ -1.62
MSH5-205ENST00000395853 KRTAP10-1P60331 282 aa4.9□□□□□ -1.63
MSH5-205ENST00000395853 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
MSH5-205ENST00000395853 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
MSH5-205ENST00000395853 SMR3BP02814 79 aaPredicted RBP4.87□□□□□ -1.63
MSH5-205ENST00000395853 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
MSH5-205ENST00000395853 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
MSH5-205ENST00000395853 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
MSH5-205ENST00000395853 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
MSH5-205ENST00000395853 COX6B2Q6YFQ2 88 aa4.79□□□□□ -1.64
MSH5-205ENST00000395853 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
MSH5-205ENST00000395853 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
MSH5-205ENST00000395853 FAT3Q8TDW7 4589 aa4.73□□□□□ -1.65
MSH5-205ENST00000395853 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
MSH5-205ENST00000395853 LRP1Q07954 4544 aaKnown RBP4.7□□□□□ -1.66
MSH5-205ENST00000395853 KRTAP13-2Q52LG2 175 aa4.7□□□□□ -1.66
MSH5-205ENST00000395853 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
MSH5-205ENST00000395853 KRTAP1-4P0C5Y4 121 aa4.66□□□□□ -1.66
MSH5-205ENST00000395853 A0A0D9SG42 100 aa4.66□□□□□ -1.66
MSH5-205ENST00000395853 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
MSH5-205ENST00000395853 XP32Q5T750 250 aa4.61□□□□□ -1.67
MSH5-205ENST00000395853 TNXBP22105 4242 aa4.61□□□□□ -1.67
MSH5-205ENST00000395853 S4R3F8 94 aa4.6□□□□□ -1.67
MSH5-205ENST00000395853 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
MSH5-205ENST00000395853 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
MSH5-205ENST00000395853 LRP2P98164 4655 aa4.57□□□□□ -1.68
MSH5-205ENST00000395853 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
MSH5-205ENST00000395853 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
MSH5-205ENST00000395853 KRTAP10-8P60410 259 aa4.53□□□□□ -1.68
MSH5-205ENST00000395853 KRTAP10-6P60371 365 aaPredicted RBP4.52□□□□□ -1.69
MSH5-205ENST00000395853 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
MSH5-205ENST00000395853 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
MSH5-205ENST00000395853 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
MSH5-205ENST00000395853 R4GN34 69 aa4.44□□□□□ -1.7
MSH5-205ENST00000395853 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
MSH5-205ENST00000395853 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
MSH5-205ENST00000395853 C9orf92A6NGG3 77 aa4.42□□□□□ -1.7
MSH5-205ENST00000395853 LPAP08519 4548 aa4.37□□□□□ -1.71
MSH5-205ENST00000395853 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
MSH5-205ENST00000395853 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
MSH5-205ENST00000395853 INE1O15225 51 aa4.31□□□□□ -1.72
MSH5-205ENST00000395853 MUC2Q02817 5179 aa4.26□□□□□ -1.73
MSH5-205ENST00000395853 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
MSH5-205ENST00000395853 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
MSH5-205ENST00000395853 M0QZ58 72 aa4.23□□□□□ -1.73
MSH5-205ENST00000395853 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
MSH5-205ENST00000395853 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
MSH5-205ENST00000395853 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
MSH5-205ENST00000395853 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
MSH5-205ENST00000395853 MT1HP80294 61 aa3.99□□□□□ -1.77
MSH5-205ENST00000395853 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
MSH5-205ENST00000395853 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
MSH5-205ENST00000395853 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
MSH5-205ENST00000395853 M0R2T5 61 aa3.88□□□□□ -1.79
MSH5-205ENST00000395853 FLGP20930 4061 aaPredicted RBP3.81□□□□□ -1.8
MSH5-205ENST00000395853 TNP1P09430 55 aa3.8□□□□□ -1.8
MSH5-205ENST00000395853 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
MSH5-205ENST00000395853 KRTAP4-6Q9BYQ5 205 aa3.76□□□□□ -1.81
MSH5-205ENST00000395853 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
MSH5-205ENST00000395853 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
MSH5-205ENST00000395853 USH2AO75445 5202 aa3.72□□□□□ -1.81
MSH5-205ENST00000395853 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
MSH5-205ENST00000395853 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
MSH5-205ENST00000395853 MT2AP02795 61 aa3.65□□□□□ -1.83
MSH5-205ENST00000395853 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
MSH5-205ENST00000395853 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
MSH5-205ENST00000395853 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
MSH5-205ENST00000395853 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
MSH5-205ENST00000395853 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
MSH5-205ENST00000395853 MT1FP04733 61 aa3.61□□□□□ -1.83
MSH5-205ENST00000395853 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
MSH5-205ENST00000395853 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
MSH5-205ENST00000395853 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
MSH5-205ENST00000395853 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
MSH5-205ENST00000395853 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
MSH5-205ENST00000395853 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
MSH5-205ENST00000395853 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
MSH5-205ENST00000395853 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
MSH5-205ENST00000395853 LCE3BQ5TA77 95 aa3.47□□□□□ -1.85
MSH5-205ENST00000395853 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
MSH5-205ENST00000395853 NEBP20929 6669 aa3.46□□□□□ -1.86
MSH5-205ENST00000395853 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
MSH5-205ENST00000395853 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms