RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 IMUPQ9GZP8 106 aa5.48□□□□□ -1.53
HLA-DQA1-203ENST00000395363 LINC00846Q9NV44 126 aa5.48□□□□□ -1.53
HLA-DQA1-203ENST00000395363 C4orf26Q17RF5 130 aa5.47□□□□□ -1.53
HLA-DQA1-203ENST00000395363 MT-ATP8P03928 68 aa5.46□□□□□ -1.54
HLA-DQA1-203ENST00000395363 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.54
HLA-DQA1-203ENST00000395363 LINC00643Q86TS7 51 aa5.45□□□□□ -1.54
HLA-DQA1-203ENST00000395363 CXCL6P80162 114 aa5.42□□□□□ -1.54
HLA-DQA1-203ENST00000395363 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
HLA-DQA1-203ENST00000395363 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
HLA-DQA1-203ENST00000395363 C5orf47Q569G3 176 aa5.38□□□□□ -1.55
HLA-DQA1-203ENST00000395363 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
HLA-DQA1-203ENST00000395363 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
HLA-DQA1-203ENST00000395363 ATP5EP2Q5VTU8 51 aa5.37□□□□□ -1.55
HLA-DQA1-203ENST00000395363 LCA10Q71F78 164 aa5.31□□□□□ -1.56
HLA-DQA1-203ENST00000395363 C1orf64Q8NEQ6 169 aa5.31□□□□□ -1.56
HLA-DQA1-203ENST00000395363 S4R3F8 94 aa5.31□□□□□ -1.56
HLA-DQA1-203ENST00000395363 FAM236AA0A1B0GUQ0 79 aa5.3□□□□□ -1.56
HLA-DQA1-203ENST00000395363 FAM236BA0A1B0GV22 79 aa5.3□□□□□ -1.56
HLA-DQA1-203ENST00000395363 ATOX1O00244 68 aa5.3□□□□□ -1.56
HLA-DQA1-203ENST00000395363 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
HLA-DQA1-203ENST00000395363 A0A087WVE0 104 aa5.29□□□□□ -1.56
HLA-DQA1-203ENST00000395363 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
HLA-DQA1-203ENST00000395363 UQCRQO14949 82 aa5.27□□□□□ -1.57
HLA-DQA1-203ENST00000395363 HIST1H4AP62805 103 aaKnown RBP5.27□□□□□ -1.57
HLA-DQA1-203ENST00000395363 MT1BP07438 61 aa5.25□□□□□ -1.57
HLA-DQA1-203ENST00000395363 SMIM20Q8N5G0 67 aa5.23□□□□□ -1.57
HLA-DQA1-203ENST00000395363 COX7CP15954 63 aa5.22□□□□□ -1.57
HLA-DQA1-203ENST00000395363 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
HLA-DQA1-203ENST00000395363 SERP2Q8N6R1 65 aa5.21□□□□□ -1.58
HLA-DQA1-203ENST00000395363 CYP4F30PQ9H0H9 118 aa5.21□□□□□ -1.58
HLA-DQA1-203ENST00000395363 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
HLA-DQA1-203ENST00000395363 TRAV22A0A0B4J277 110 aa5.18□□□□□ -1.58
HLA-DQA1-203ENST00000395363 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
HLA-DQA1-203ENST00000395363 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
HLA-DQA1-203ENST00000395363 Q5VV11 94 aa5.16□□□□□ -1.58
HLA-DQA1-203ENST00000395363 A6NN06 94 aa5.15□□□□□ -1.59
HLA-DQA1-203ENST00000395363 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
HLA-DQA1-203ENST00000395363 TRAV7A0A075B6U4 112 aa5.14□□□□□ -1.59
HLA-DQA1-203ENST00000395363 LOC101927531A0A1B0GV80 90 aa5.14□□□□□ -1.59
HLA-DQA1-203ENST00000395363 KLKP1Q107X0 134 aa5.14□□□□□ -1.59
HLA-DQA1-203ENST00000395363 H0Y9P7 68 aa5.13□□□□□ -1.59
HLA-DQA1-203ENST00000395363 TMEM258P61165 79 aa5.12□□□□□ -1.59
HLA-DQA1-203ENST00000395363 OCR1Q9BZK8 76 aa5.1□□□□□ -1.59
HLA-DQA1-203ENST00000395363 NDUFC1O43677 76 aa5.09□□□□□ -1.59
HLA-DQA1-203ENST00000395363 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
HLA-DQA1-203ENST00000395363 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
HLA-DQA1-203ENST00000395363 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
HLA-DQA1-203ENST00000395363 H3BPC8 53 aa5.06□□□□□ -1.6
HLA-DQA1-203ENST00000395363 NEBP20929 6669 aa5.05□□□□□ -1.6
HLA-DQA1-203ENST00000395363 MP68P56378 58 aa5.05□□□□□ -1.6
HLA-DQA1-203ENST00000395363 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
HLA-DQA1-203ENST00000395363 LINC00208Q96KT6 92 aa5.04□□□□□ -1.6
HLA-DQA1-203ENST00000395363 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
HLA-DQA1-203ENST00000395363 KMT2DO14686 5537 aa5.01□□□□□ -1.61
HLA-DQA1-203ENST00000395363 ADM2Q7Z4H4 148 aa5.01□□□□□ -1.61
HLA-DQA1-203ENST00000395363 A8MUN3 132 aa5□□□□□ -1.61
HLA-DQA1-203ENST00000395363 H7BZZ5 65 aa4.97□□□□□ -1.61
HLA-DQA1-203ENST00000395363 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
HLA-DQA1-203ENST00000395363 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
HLA-DQA1-203ENST00000395363 H0YAA0 97 aa4.95□□□□□ -1.62
HLA-DQA1-203ENST00000395363 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
HLA-DQA1-203ENST00000395363 P0C880 135 aa4.94□□□□□ -1.62
HLA-DQA1-203ENST00000395363 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
HLA-DQA1-203ENST00000395363 SNURFQ9Y675 71 aa4.92□□□□□ -1.62
HLA-DQA1-203ENST00000395363 MT1XP80297 61 aa4.91□□□□□ -1.62
HLA-DQA1-203ENST00000395363 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
HLA-DQA1-203ENST00000395363 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
HLA-DQA1-203ENST00000395363 DMAC1Q96GE9 116 aa4.87□□□□□ -1.63
HLA-DQA1-203ENST00000395363 M0QZ58 72 aa4.84□□□□□ -1.63
HLA-DQA1-203ENST00000395363 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
HLA-DQA1-203ENST00000395363 SPANXA2-OT1Q8N9U9 137 aa4.83□□□□□ -1.64
HLA-DQA1-203ENST00000395363 R4GN34 69 aa4.83□□□□□ -1.64
HLA-DQA1-203ENST00000395363 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
HLA-DQA1-203ENST00000395363 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
HLA-DQA1-203ENST00000395363 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
HLA-DQA1-203ENST00000395363 ACYP2P14621 99 aa4.79□□□□□ -1.64
HLA-DQA1-203ENST00000395363 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
HLA-DQA1-203ENST00000395363 V9GYY9 64 aa4.76□□□□□ -1.65
HLA-DQA1-203ENST00000395363 SPRR2EP22531 72 aa4.75□□□□□ -1.65
HLA-DQA1-203ENST00000395363 SPRR2BP35325 72 aa4.75□□□□□ -1.65
HLA-DQA1-203ENST00000395363 SPRR2AP35326 72 aa4.75□□□□□ -1.65
HLA-DQA1-203ENST00000395363 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
HLA-DQA1-203ENST00000395363 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
HLA-DQA1-203ENST00000395363 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
HLA-DQA1-203ENST00000395363 Q1T7F1 81 aa4.7□□□□□ -1.66
HLA-DQA1-203ENST00000395363 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
HLA-DQA1-203ENST00000395363 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
HLA-DQA1-203ENST00000395363 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
HLA-DQA1-203ENST00000395363 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
HLA-DQA1-203ENST00000395363 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
HLA-DQA1-203ENST00000395363 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
HLA-DQA1-203ENST00000395363 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
HLA-DQA1-203ENST00000395363 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
HLA-DQA1-203ENST00000395363 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
HLA-DQA1-203ENST00000395363 COA5Q86WW8 74 aa4.61□□□□□ -1.67
HLA-DQA1-203ENST00000395363 SPRR2DP22532 72 aa4.58□□□□□ -1.68
HLA-DQA1-203ENST00000395363 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
HLA-DQA1-203ENST00000395363 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
HLA-DQA1-203ENST00000395363 PSPHP1O15172 72 aa4.51□□□□□ -1.69
HLA-DQA1-203ENST00000395363 PRR15LQ9BU68 103 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms