RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
VPS26A-203ENST00000395098 S4R3F8 94 aa6.46□□□□□ -1.38
VPS26A-203ENST00000395098 FAT4Q6V0I7 4981 aa6.46□□□□□ -1.38
VPS26A-203ENST00000395098 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
VPS26A-203ENST00000395098 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
VPS26A-203ENST00000395098 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
VPS26A-203ENST00000395098 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
VPS26A-203ENST00000395098 MT1HP80294 61 aa6.31□□□□□ -1.4
VPS26A-203ENST00000395098 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
VPS26A-203ENST00000395098 Q1T7F1 81 aa6.3□□□□□ -1.4
VPS26A-203ENST00000395098 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
VPS26A-203ENST00000395098 PSPHP1O15172 72 aa6.24□□□□□ -1.41
VPS26A-203ENST00000395098 V9GYY9 64 aa6.24□□□□□ -1.41
VPS26A-203ENST00000395098 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
VPS26A-203ENST00000395098 A0A1B0GU69 56 aa6.21□□□□□ -1.41
VPS26A-203ENST00000395098 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
VPS26A-203ENST00000395098 M0R2T5 61 aa6.2□□□□□ -1.42
VPS26A-203ENST00000395098 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
VPS26A-203ENST00000395098 ADM2Q7Z4H4 148 aa6.18□□□□□ -1.42
VPS26A-203ENST00000395098 Q5VV11 94 aa6.17□□□□□ -1.42
VPS26A-203ENST00000395098 P0C880 135 aa6.17□□□□□ -1.42
VPS26A-203ENST00000395098 SEC61GP60059 68 aa6.16□□□□□ -1.42
VPS26A-203ENST00000395098 H0YAA0 97 aa6.15□□□□□ -1.42
VPS26A-203ENST00000395098 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
VPS26A-203ENST00000395098 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
VPS26A-203ENST00000395098 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
VPS26A-203ENST00000395098 A0A1B0GU33 70 aa6.06□□□□□ -1.44
VPS26A-203ENST00000395098 MT2AP02795 61 aa6.04□□□□□ -1.44
VPS26A-203ENST00000395098 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
VPS26A-203ENST00000395098 MT1FP04733 61 aa6.02□□□□□ -1.45
VPS26A-203ENST00000395098 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
VPS26A-203ENST00000395098 A6NED7 52 aa6.01□□□□□ -1.45
VPS26A-203ENST00000395098 UQCR11O14957 56 aa6□□□□□ -1.45
VPS26A-203ENST00000395098 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
VPS26A-203ENST00000395098 A8MU10 97 aa5.96□□□□□ -1.46
VPS26A-203ENST00000395098 M0QZ58 72 aa5.95□□□□□ -1.46
VPS26A-203ENST00000395098 R4GN34 69 aa5.95□□□□□ -1.46
VPS26A-203ENST00000395098 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
VPS26A-203ENST00000395098 BRK1Q8WUW1 75 aa5.9□□□□□ -1.47
VPS26A-203ENST00000395098 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
VPS26A-203ENST00000395098 A0A0D9SG42 100 aa5.89□□□□□ -1.47
VPS26A-203ENST00000395098 CDC42SE1Q9NRR8 79 aa5.89□□□□□ -1.47
VPS26A-203ENST00000395098 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
VPS26A-203ENST00000395098 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
VPS26A-203ENST00000395098 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
VPS26A-203ENST00000395098 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
VPS26A-203ENST00000395098 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
VPS26A-203ENST00000395098 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
VPS26A-203ENST00000395098 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
VPS26A-203ENST00000395098 LCE2BO14633 110 aa5.72□□□□□ -1.49
VPS26A-203ENST00000395098 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
VPS26A-203ENST00000395098 A6NN06 94 aa5.69□□□□□ -1.5
VPS26A-203ENST00000395098 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
VPS26A-203ENST00000395098 MT1BP07438 61 aa5.67□□□□□ -1.5
VPS26A-203ENST00000395098 K7ERS5 55 aa5.63□□□□□ -1.51
VPS26A-203ENST00000395098 USH2AO75445 5202 aa5.62□□□□□ -1.51
VPS26A-203ENST00000395098 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
VPS26A-203ENST00000395098 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
VPS26A-203ENST00000395098 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
VPS26A-203ENST00000395098 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
VPS26A-203ENST00000395098 FSIP2Q5CZC0 6907 aa5.5□□□□□ -1.53
VPS26A-203ENST00000395098 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
VPS26A-203ENST00000395098 MT1XP80297 61 aa5.47□□□□□ -1.53
VPS26A-203ENST00000395098 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
VPS26A-203ENST00000395098 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
VPS26A-203ENST00000395098 ROMO1P60602 79 aa5.43□□□□□ -1.54
VPS26A-203ENST00000395098 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
VPS26A-203ENST00000395098 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
VPS26A-203ENST00000395098 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
VPS26A-203ENST00000395098 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
VPS26A-203ENST00000395098 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
VPS26A-203ENST00000395098 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
VPS26A-203ENST00000395098 TNP1P09430 55 aa5.26□□□□□ -1.57
VPS26A-203ENST00000395098 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
VPS26A-203ENST00000395098 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
VPS26A-203ENST00000395098 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
VPS26A-203ENST00000395098 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
VPS26A-203ENST00000395098 KMT2DO14686 5537 aa5.15□□□□□ -1.59
VPS26A-203ENST00000395098 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
VPS26A-203ENST00000395098 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
VPS26A-203ENST00000395098 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
VPS26A-203ENST00000395098 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
VPS26A-203ENST00000395098 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
VPS26A-203ENST00000395098 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
VPS26A-203ENST00000395098 SVIPQ8NHG7 77 aa5□□□□□ -1.61
VPS26A-203ENST00000395098 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
VPS26A-203ENST00000395098 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
VPS26A-203ENST00000395098 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
VPS26A-203ENST00000395098 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
VPS26A-203ENST00000395098 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
VPS26A-203ENST00000395098 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
VPS26A-203ENST00000395098 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-203ENST00000395098 MT1EP04732 61 aa4.79□□□□□ -1.64
VPS26A-203ENST00000395098 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
VPS26A-203ENST00000395098 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
VPS26A-203ENST00000395098 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
VPS26A-203ENST00000395098 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
VPS26A-203ENST00000395098 MT1LQ93083 61 aa4.68□□□□□ -1.66
VPS26A-203ENST00000395098 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
VPS26A-203ENST00000395098 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms