RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 UQCR11O14957 56 aa9.72□□□□□ -0.85
SIL1-202ENST00000394817 SPATA8Q6RVD6 105 aa9.7□□□□□ -0.86
SIL1-202ENST00000394817 A6NN06 94 aa9.69□□□□□ -0.86
SIL1-202ENST00000394817 SEC61GP60059 68 aa9.68□□□□□ -0.86
SIL1-202ENST00000394817 MIR22HGQ0VDD5 57 aa9.65□□□□□ -0.86
SIL1-202ENST00000394817 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
SIL1-202ENST00000394817 J3QL48 77 aa9.56□□□□□ -0.88
SIL1-202ENST00000394817 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
SIL1-202ENST00000394817 LPAP08519 4548 aa9.52□□□□□ -0.89
SIL1-202ENST00000394817 LRP2P98164 4655 aa9.47□□□□□ -0.89
SIL1-202ENST00000394817 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.89
SIL1-202ENST00000394817 A0A1B0GU33 70 aa9.45□□□□□ -0.9
SIL1-202ENST00000394817 H0YAA0 97 aa9.45□□□□□ -0.9
SIL1-202ENST00000394817 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
SIL1-202ENST00000394817 H1FX-AS1Q4G0G2 97 aa9.44□□□□□ -0.9
SIL1-202ENST00000394817 S4R3F8 94 aa9.42□□□□□ -0.9
SIL1-202ENST00000394817 KRTAP10-6P60371 365 aaPredicted RBP9.3□□□□□ -0.92
SIL1-202ENST00000394817 RBM12B-AS1Q9P1G2 102 aa9.27□□□□□ -0.93
SIL1-202ENST00000394817 HERC1Q15751 4861 aa9.27□□□□□ -0.93
SIL1-202ENST00000394817 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
SIL1-202ENST00000394817 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
SIL1-202ENST00000394817 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
SIL1-202ENST00000394817 HMCN2Q8NDA2 5059 aa9.16□□□□□ -0.94
SIL1-202ENST00000394817 PRAC1Q96KF2 57 aa9.15□□□□□ -0.94
SIL1-202ENST00000394817 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
SIL1-202ENST00000394817 P0C880 135 aa9.13□□□□□ -0.95
SIL1-202ENST00000394817 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
SIL1-202ENST00000394817 CSAG1Q6PB30 78 aa9.12□□□□□ -0.95
SIL1-202ENST00000394817 KRTAP4-1Q9BYQ7 146 aa9.09□□□□□ -0.95
SIL1-202ENST00000394817 K7ERS5 55 aa9.08□□□□□ -0.96
SIL1-202ENST00000394817 A0A0D9SG42 100 aa8.98□□□□□ -0.97
SIL1-202ENST00000394817 MUC2Q02817 5179 aa8.92□□□□□ -0.98
SIL1-202ENST00000394817 M0QZ58 72 aa8.9□□□□□ -0.99
SIL1-202ENST00000394817 KRTAP19-2Q3LHN2 52 aa8.88□□□□□ -0.99
SIL1-202ENST00000394817 ROMO1P60602 79 aa8.83□□□□□ -1
SIL1-202ENST00000394817 KRTAP12-2P59991 146 aa8.81□□□□□ -1
SIL1-202ENST00000394817 KRTAP12-1P59990 96 aa8.8□□□□□ -1
SIL1-202ENST00000394817 LINC01554Q52M75 96 aa8.79□□□□□ -1
SIL1-202ENST00000394817 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
SIL1-202ENST00000394817 UBR4Q5T4S7 5183 aa8.78□□□□□ -1
SIL1-202ENST00000394817 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
SIL1-202ENST00000394817 SPINT4Q6UDR6 99 aa8.72□□□□□ -1.01
SIL1-202ENST00000394817 R4GN34 69 aa8.7□□□□□ -1.02
SIL1-202ENST00000394817 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
SIL1-202ENST00000394817 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
SIL1-202ENST00000394817 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
SIL1-202ENST00000394817 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
SIL1-202ENST00000394817 FAT4Q6V0I7 4981 aa8.53□□□□□ -1.04
SIL1-202ENST00000394817 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
SIL1-202ENST00000394817 MT1HP80294 61 aa8.37□□□□□ -1.07
SIL1-202ENST00000394817 M0R2T5 61 aa8.3□□□□□ -1.08
SIL1-202ENST00000394817 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.09
SIL1-202ENST00000394817 SPRR2GQ9BYE4 73 aa8.13□□□□□ -1.11
SIL1-202ENST00000394817 MT2AP02795 61 aa8.09□□□□□ -1.11
SIL1-202ENST00000394817 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
SIL1-202ENST00000394817 MT1FP04733 61 aa8.07□□□□□ -1.12
SIL1-202ENST00000394817 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
SIL1-202ENST00000394817 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
SIL1-202ENST00000394817 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
SIL1-202ENST00000394817 KRTAP15-1Q3LI76 137 aa7.93□□□□□ -1.14
SIL1-202ENST00000394817 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
SIL1-202ENST00000394817 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
SIL1-202ENST00000394817 TNP1P09430 55 aa7.9□□□□□ -1.14
SIL1-202ENST00000394817 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
SIL1-202ENST00000394817 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
SIL1-202ENST00000394817 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
SIL1-202ENST00000394817 MT1BP07438 61 aa7.7□□□□□ -1.18
SIL1-202ENST00000394817 H3BS24 57 aa7.63□□□□□ -1.19
SIL1-202ENST00000394817 LCE2BO14633 110 aa7.58□□□□□ -1.2
SIL1-202ENST00000394817 MT1XP80297 61 aa7.58□□□□□ -1.2
SIL1-202ENST00000394817 KRTAP10-5P60370 271 aa7.57□□□□□ -1.2
SIL1-202ENST00000394817 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
SIL1-202ENST00000394817 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
SIL1-202ENST00000394817 USH2AO75445 5202 aa7.44□□□□□ -1.22
SIL1-202ENST00000394817 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
SIL1-202ENST00000394817 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
SIL1-202ENST00000394817 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
SIL1-202ENST00000394817 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
SIL1-202ENST00000394817 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
SIL1-202ENST00000394817 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
SIL1-202ENST00000394817 LUZP6Q538Z0 58 aa7.3□□□□□ -1.24
SIL1-202ENST00000394817 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
SIL1-202ENST00000394817 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
SIL1-202ENST00000394817 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
SIL1-202ENST00000394817 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
SIL1-202ENST00000394817 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
SIL1-202ENST00000394817 KMT2DO14686 5537 aa6.96□□□□□ -1.29
SIL1-202ENST00000394817 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
SIL1-202ENST00000394817 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
SIL1-202ENST00000394817 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
SIL1-202ENST00000394817 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.32
SIL1-202ENST00000394817 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
SIL1-202ENST00000394817 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
SIL1-202ENST00000394817 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
SIL1-202ENST00000394817 MT1EP04732 61 aa6.58□□□□□ -1.36
SIL1-202ENST00000394817 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
SIL1-202ENST00000394817 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
SIL1-202ENST00000394817 MT1LQ93083 61 aa6.54□□□□□ -1.36
SIL1-202ENST00000394817 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
SIL1-202ENST00000394817 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms