RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 H1FX-AS1Q4G0G2 97 aa7.4□□□□□ -1.22
GAP43-202ENST00000393780 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.23
GAP43-202ENST00000393780 RYR2Q92736 4967 aa7.39□□□□□ -1.23
GAP43-202ENST00000393780 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
GAP43-202ENST00000393780 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
GAP43-202ENST00000393780 TNXBP22105 4242 aa7.32□□□□□ -1.24
GAP43-202ENST00000393780 LINC01554Q52M75 96 aa7.31□□□□□ -1.24
GAP43-202ENST00000393780 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
GAP43-202ENST00000393780 RPL37P61927 97 aaKnown RBP7.3□□□□□ -1.24
GAP43-202ENST00000393780 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
GAP43-202ENST00000393780 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
GAP43-202ENST00000393780 HSPG2P98160 4391 aa7.25□□□□□ -1.25
GAP43-202ENST00000393780 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
GAP43-202ENST00000393780 Q5VSD8 79 aa7.23□□□□□ -1.25
GAP43-202ENST00000393780 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
GAP43-202ENST00000393780 K7ERS5 55 aa7.19□□□□□ -1.26
GAP43-202ENST00000393780 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
GAP43-202ENST00000393780 KRTAP4-12Q9BQ66 201 aa7.15□□□□□ -1.26
GAP43-202ENST00000393780 S4R3F8 94 aa7.15□□□□□ -1.26
GAP43-202ENST00000393780 KMT2CQ8NEZ4 4911 aaKnown RBP7.14□□□□□ -1.27
GAP43-202ENST00000393780 KRTAP25-1Q3LHN0 102 aa7.14□□□□□ -1.27
GAP43-202ENST00000393780 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
GAP43-202ENST00000393780 RYR1P21817 5038 aa7.13□□□□□ -1.27
GAP43-202ENST00000393780 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
GAP43-202ENST00000393780 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
GAP43-202ENST00000393780 ROMO1P60602 79 aa7.04□□□□□ -1.28
GAP43-202ENST00000393780 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
GAP43-202ENST00000393780 DMBT1Q9UGM3 2413 aaPredicted RBP7.03□□□□□ -1.28
GAP43-202ENST00000393780 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
GAP43-202ENST00000393780 P0C880 135 aa6.98□□□□□ -1.29
GAP43-202ENST00000393780 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
GAP43-202ENST00000393780 MYCBP2O75592 4640 aa6.96□□□□□ -1.29
GAP43-202ENST00000393780 A0A0D9SG42 100 aa6.95□□□□□ -1.3
GAP43-202ENST00000393780 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
GAP43-202ENST00000393780 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
GAP43-202ENST00000393780 RYR3Q15413 4870 aa6.93□□□□□ -1.3
GAP43-202ENST00000393780 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
GAP43-202ENST00000393780 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
GAP43-202ENST00000393780 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
GAP43-202ENST00000393780 M0QZ58 72 aa6.85□□□□□ -1.31
GAP43-202ENST00000393780 KRTAP12-2P59991 146 aa6.84□□□□□ -1.32
GAP43-202ENST00000393780 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
GAP43-202ENST00000393780 LRP2P98164 4655 aa6.8□□□□□ -1.32
GAP43-202ENST00000393780 LPAP08519 4548 aa6.75□□□□□ -1.33
GAP43-202ENST00000393780 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
GAP43-202ENST00000393780 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
GAP43-202ENST00000393780 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
GAP43-202ENST00000393780 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
GAP43-202ENST00000393780 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
GAP43-202ENST00000393780 KRTAP4-5Q9BYR2 181 aa6.64□□□□□ -1.35
GAP43-202ENST00000393780 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
GAP43-202ENST00000393780 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
GAP43-202ENST00000393780 H3BS24 57 aa6.6□□□□□ -1.35
GAP43-202ENST00000393780 R4GN34 69 aa6.6□□□□□ -1.35
GAP43-202ENST00000393780 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.35
GAP43-202ENST00000393780 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
GAP43-202ENST00000393780 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
GAP43-202ENST00000393780 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
GAP43-202ENST00000393780 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
GAP43-202ENST00000393780 KRTAP4-9Q9BYQ8 210 aa6.47□□□□□ -1.37
GAP43-202ENST00000393780 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
GAP43-202ENST00000393780 HERC2O95714 4834 aa6.36□□□□□ -1.39
GAP43-202ENST00000393780 BIRC6Q9NR09 4857 aa6.32□□□□□ -1.4
GAP43-202ENST00000393780 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
GAP43-202ENST00000393780 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
GAP43-202ENST00000393780 HERC1Q15751 4861 aa6.29□□□□□ -1.4
GAP43-202ENST00000393780 NDUFAF8A1L188 74 aa6.28□□□□□ -1.4
GAP43-202ENST00000393780 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
GAP43-202ENST00000393780 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
GAP43-202ENST00000393780 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
GAP43-202ENST00000393780 KRTAP4-11Q9BYQ6 195 aa6.23□□□□□ -1.41
GAP43-202ENST00000393780 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
GAP43-202ENST00000393780 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
GAP43-202ENST00000393780 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
GAP43-202ENST00000393780 TNP1P09430 55 aa6.09□□□□□ -1.44
GAP43-202ENST00000393780 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
GAP43-202ENST00000393780 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
GAP43-202ENST00000393780 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
GAP43-202ENST00000393780 MUC2Q02817 5179 aa6.01□□□□□ -1.45
GAP43-202ENST00000393780 PCLOQ9Y6V0 5065 aa5.95□□□□□ -1.46
GAP43-202ENST00000393780 LUZP6Q538Z0 58 aa5.92□□□□□ -1.46
GAP43-202ENST00000393780 MT1HP80294 61 aa5.9□□□□□ -1.46
GAP43-202ENST00000393780 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
GAP43-202ENST00000393780 M0R2T5 61 aa5.86□□□□□ -1.47
GAP43-202ENST00000393780 MT2AP02795 61 aa5.84□□□□□ -1.48
GAP43-202ENST00000393780 MT1FP04733 61 aa5.81□□□□□ -1.48
GAP43-202ENST00000393780 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
GAP43-202ENST00000393780 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
GAP43-202ENST00000393780 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
GAP43-202ENST00000393780 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
GAP43-202ENST00000393780 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.48
GAP43-202ENST00000393780 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
GAP43-202ENST00000393780 MT1BP07438 61 aa5.66□□□□□ -1.5
GAP43-202ENST00000393780 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
GAP43-202ENST00000393780 A0A0A0MQY5 61 aa5.65□□□□□ -1.51
GAP43-202ENST00000393780 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
GAP43-202ENST00000393780 MT1XP80297 61 aa5.62□□□□□ -1.51
GAP43-202ENST00000393780 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
GAP43-202ENST00000393780 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
GAP43-202ENST00000393780 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms