RNA–Protein interactions for RNA: ENST00000393436.9

RAP1B-204, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-204ENST00000393436 LRP2P98164 4655 aa10.82□□□□□ -0.68
RAP1B-204ENST00000393436 LPAP08519 4548 aa10.81□□□□□ -0.68
RAP1B-204ENST00000393436 SEC61GP60059 68 aa10.74□□□□□ -0.69
RAP1B-204ENST00000393436 J3QL48 77 aa10.71□□□□□ -0.69
RAP1B-204ENST00000393436 UQCR11O14957 56 aa10.7□□□□□ -0.7
RAP1B-204ENST00000393436 SPATA8Q6RVD6 105 aa10.66□□□□□ -0.7
RAP1B-204ENST00000393436 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
RAP1B-204ENST00000393436 MIR22HGQ0VDD5 57 aa10.65□□□□□ -0.71
RAP1B-204ENST00000393436 PMAIP1Q13794 54 aa10.65□□□□□ -0.71
RAP1B-204ENST00000393436 PCLOQ9Y6V0 5065 aa10.6□□□□□ -0.71
RAP1B-204ENST00000393436 S4R3F8 94 aa10.6□□□□□ -0.71
RAP1B-204ENST00000393436 H1FX-AS1Q4G0G2 97 aa10.56□□□□□ -0.72
RAP1B-204ENST00000393436 A6NN06 94 aa10.54□□□□□ -0.72
RAP1B-204ENST00000393436 A0A1B0GU33 70 aa10.51□□□□□ -0.73
RAP1B-204ENST00000393436 RBM12B-AS1Q9P1G2 102 aa10.5□□□□□ -0.73
RAP1B-204ENST00000393436 SEC61BP60468 96 aaKnown RBP10.48□□□□□ -0.73
RAP1B-204ENST00000393436 H0YAA0 97 aa10.48□□□□□ -0.73
RAP1B-204ENST00000393436 MUC17Q685J3 4493 aa10.42□□□□□ -0.74
RAP1B-204ENST00000393436 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
RAP1B-204ENST00000393436 KRTAP4-1Q9BYQ7 146 aa10.39□□□□□ -0.75
RAP1B-204ENST00000393436 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
RAP1B-204ENST00000393436 KTN1-AS1Q86SY8 53 aa10.32□□□□□ -0.76
RAP1B-204ENST00000393436 CSAG1Q6PB30 78 aa10.28□□□□□ -0.76
RAP1B-204ENST00000393436 P0C880 135 aa10.28□□□□□ -0.76
RAP1B-204ENST00000393436 HERC1Q15751 4861 aa10.27□□□□□ -0.76
RAP1B-204ENST00000393436 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
RAP1B-204ENST00000393436 ADM2Q7Z4H4 148 aa10.23□□□□□ -0.77
RAP1B-204ENST00000393436 HMCN2Q8NDA2 5059 aa10.15□□□□□ -0.79
RAP1B-204ENST00000393436 KRTAP19-2Q3LHN2 52 aa10.14□□□□□ -0.79
RAP1B-204ENST00000393436 A0A0D9SG42 100 aa10.09□□□□□ -0.79
RAP1B-204ENST00000393436 MUC2Q02817 5179 aa10.04□□□□□ -0.8
RAP1B-204ENST00000393436 PRAC1Q96KF2 57 aa10.02□□□□□ -0.8
RAP1B-204ENST00000393436 K7ERS5 55 aa10□□□□□ -0.81
RAP1B-204ENST00000393436 M0QZ58 72 aa9.92□□□□□ -0.82
RAP1B-204ENST00000393436 FLGP20930 4061 aaPredicted RBP9.87□□□□□ -0.83
RAP1B-204ENST00000393436 KRTAP12-2P59991 146 aa9.85□□□□□ -0.83
RAP1B-204ENST00000393436 LORP23490 312 aaPredicted RBP9.82□□□□□ -0.84
RAP1B-204ENST00000393436 KRTAP12-1P59990 96 aa9.82□□□□□ -0.84
RAP1B-204ENST00000393436 R4GN34 69 aa9.8□□□□□ -0.84
RAP1B-204ENST00000393436 SPINT4Q6UDR6 99 aa9.78□□□□□ -0.84
RAP1B-204ENST00000393436 ROMO1P60602 79 aa9.73□□□□□ -0.85
RAP1B-204ENST00000393436 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
RAP1B-204ENST00000393436 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
RAP1B-204ENST00000393436 UBR4Q5T4S7 5183 aa9.67□□□□□ -0.86
RAP1B-204ENST00000393436 RNF213Q63HN8 5207 aa9.66□□□□□ -0.86
RAP1B-204ENST00000393436 FAT4Q6V0I7 4981 aa9.63□□□□□ -0.87
RAP1B-204ENST00000393436 CRIPTQ9P021 101 aa9.61□□□□□ -0.87
RAP1B-204ENST00000393436 KRTAP25-1Q3LHN0 102 aa9.59□□□□□ -0.87
RAP1B-204ENST00000393436 MT1HP80294 61 aa9.49□□□□□ -0.89
RAP1B-204ENST00000393436 M0R2T5 61 aa9.43□□□□□ -0.9
RAP1B-204ENST00000393436 C10orf95Q9H7T3 257 aa9.38□□□□□ -0.91
RAP1B-204ENST00000393436 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
RAP1B-204ENST00000393436 MT2AP02795 61 aa9.22□□□□□ -0.93
RAP1B-204ENST00000393436 SPRR2GQ9BYE4 73 aa9.21□□□□□ -0.93
RAP1B-204ENST00000393436 MT1FP04733 61 aa9.21□□□□□ -0.94
RAP1B-204ENST00000393436 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
RAP1B-204ENST00000393436 KRTAP9-8Q9BYQ0 159 aa9.2□□□□□ -0.94
RAP1B-204ENST00000393436 KRTAP10-10P60014 251 aa9.16□□□□□ -0.94
RAP1B-204ENST00000393436 PLAC4Q8WY50 150 aa9□□□□□ -0.97
RAP1B-204ENST00000393436 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
RAP1B-204ENST00000393436 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
RAP1B-204ENST00000393436 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
RAP1B-204ENST00000393436 TNP1P09430 55 aa8.83□□□□□ -1
RAP1B-204ENST00000393436 MT1BP07438 61 aa8.8□□□□□ -1
RAP1B-204ENST00000393436 PP632Q6XCG6 107 aa8.77□□□□□ -1.01
RAP1B-204ENST00000393436 KRTAP15-1Q3LI76 137 aa8.63□□□□□ -1.03
RAP1B-204ENST00000393436 KRTAP23-1A1A580 65 aa8.62□□□□□ -1.03
RAP1B-204ENST00000393436 KRTAP10-5P60370 271 aa8.62□□□□□ -1.03
RAP1B-204ENST00000393436 MT1XP80297 61 aa8.62□□□□□ -1.03
RAP1B-204ENST00000393436 LCE2BO14633 110 aa8.56□□□□□ -1.04
RAP1B-204ENST00000393436 H3BS24 57 aa8.48□□□□□ -1.05
RAP1B-204ENST00000393436 LCE3AQ5TA76 89 aa8.46□□□□□ -1.05
RAP1B-204ENST00000393436 PRO2289Q9P1D8 64 aa8.36□□□□□ -1.07
RAP1B-204ENST00000393436 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
RAP1B-204ENST00000393436 USH2AO75445 5202 aa8.32□□□□□ -1.08
RAP1B-204ENST00000393436 KRTAP10-12P60413 245 aa8.29□□□□□ -1.08
RAP1B-204ENST00000393436 KRTAP8-1Q8IUC2 63 aa8.24□□□□□ -1.09
RAP1B-204ENST00000393436 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
RAP1B-204ENST00000393436 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
RAP1B-204ENST00000393436 KRTAP12-3P60328 96 aa8.07□□□□□ -1.12
RAP1B-204ENST00000393436 KRTAP9-2Q9BYQ4 174 aa8.04□□□□□ -1.12
RAP1B-204ENST00000393436 SPRR5A0A1B0GTR4 108 aa8.02□□□□□ -1.13
RAP1B-204ENST00000393436 SSPOA2VEC9 5147 aa7.97□□□□□ -1.13
RAP1B-204ENST00000393436 FSIP2Q5CZC0 6907 aa7.95□□□□□ -1.14
RAP1B-204ENST00000393436 KMT2DO14686 5537 aa7.94□□□□□ -1.14
RAP1B-204ENST00000393436 LUZP6Q538Z0 58 aa7.93□□□□□ -1.14
RAP1B-204ENST00000393436 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
RAP1B-204ENST00000393436 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
RAP1B-204ENST00000393436 KRTAP19-5Q3LI72 72 aa7.91□□□□□ -1.14
RAP1B-204ENST00000393436 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
RAP1B-204ENST00000393436 CRCT1Q9UGL9 99 aa7.69□□□□□ -1.18
RAP1B-204ENST00000393436 KRTAP19-7Q3SYF9 63 aa7.68□□□□□ -1.18
RAP1B-204ENST00000393436 KRTAP9-6A0A140TA67 174 aa7.67□□□□□ -1.18
RAP1B-204ENST00000393436 A0A0A0MQY5 61 aa7.61□□□□□ -1.19
RAP1B-204ENST00000393436 LCE3CQ5T5A8 94 aa7.57□□□□□ -1.2
RAP1B-204ENST00000393436 FCGBPQ9Y6R7 5405 aaPredicted RBP7.56□□□□□ -1.2
RAP1B-204ENST00000393436 MT1EP04732 61 aa7.5□□□□□ -1.21
RAP1B-204ENST00000393436 MT1LQ93083 61 aa7.42□□□□□ -1.22
RAP1B-204ENST00000393436 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
RAP1B-204ENST00000393436 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms