RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 STARD9Q9P2P6 4700 aa4.02□□□□□ -1.77
ATXN3-203ENST00000393287 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
ATXN3-203ENST00000393287 HERC2O95714 4834 aa3.99□□□□□ -1.77
ATXN3-203ENST00000393287 VPS13CQ709C8 3753 aa3.96□□□□□ -1.78
ATXN3-203ENST00000393287 DNAH1Q9P2D7 4330 aa3.96□□□□□ -1.78
ATXN3-203ENST00000393287 DYNC2H1Q8NCM8 4307 aaKnown RBP3.95□□□□□ -1.78
ATXN3-203ENST00000393287 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
ATXN3-203ENST00000393287 LRP1BQ9NZR2 4599 aa3.94□□□□□ -1.78
ATXN3-203ENST00000393287 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
ATXN3-203ENST00000393287 FAT1Q14517 4588 aa3.91□□□□□ -1.78
ATXN3-203ENST00000393287 PCLOQ9Y6V0 5065 aa3.89□□□□□ -1.79
ATXN3-203ENST00000393287 P0C880 135 aa3.89□□□□□ -1.79
ATXN3-203ENST00000393287 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
ATXN3-203ENST00000393287 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
ATXN3-203ENST00000393287 CMYA5Q8N3K9 4069 aa3.86□□□□□ -1.79
ATXN3-203ENST00000393287 KMT2CQ8NEZ4 4911 aaKnown RBP3.86□□□□□ -1.79
ATXN3-203ENST00000393287 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
ATXN3-203ENST00000393287 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
ATXN3-203ENST00000393287 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.79
ATXN3-203ENST00000393287 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
ATXN3-203ENST00000393287 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
ATXN3-203ENST00000393287 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
ATXN3-203ENST00000393287 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
ATXN3-203ENST00000393287 HERC1Q15751 4861 aa3.79□□□□□ -1.8
ATXN3-203ENST00000393287 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
ATXN3-203ENST00000393287 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
ATXN3-203ENST00000393287 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
ATXN3-203ENST00000393287 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
ATXN3-203ENST00000393287 DNAH8Q96JB1 4490 aa3.71□□□□□ -1.82
ATXN3-203ENST00000393287 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-203ENST00000393287 DNAH7Q8WXX0 4024 aa3.66□□□□□ -1.82
ATXN3-203ENST00000393287 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
ATXN3-203ENST00000393287 KRTAP3-3Q9BYR6 98 aa3.65□□□□□ -1.82
ATXN3-203ENST00000393287 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
ATXN3-203ENST00000393287 MT1HP80294 61 aa3.61□□□□□ -1.83
ATXN3-203ENST00000393287 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
ATXN3-203ENST00000393287 KRTAP3-2Q9BYR7 98 aa3.6□□□□□ -1.83
ATXN3-203ENST00000393287 MYCBP2O75592 4640 aa3.6□□□□□ -1.83
ATXN3-203ENST00000393287 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
ATXN3-203ENST00000393287 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
ATXN3-203ENST00000393287 KMT2AQ03164 3969 aa3.57□□□□□ -1.84
ATXN3-203ENST00000393287 LYSTQ99698 3801 aa3.56□□□□□ -1.84
ATXN3-203ENST00000393287 CSMD3Q7Z407 3707 aa3.56□□□□□ -1.84
ATXN3-203ENST00000393287 FAT3Q8TDW7 4589 aa3.56□□□□□ -1.84
ATXN3-203ENST00000393287 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
ATXN3-203ENST00000393287 HSPG2P98160 4391 aa3.55□□□□□ -1.84
ATXN3-203ENST00000393287 UBR4Q5T4S7 5183 aa3.53□□□□□ -1.84
ATXN3-203ENST00000393287 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
ATXN3-203ENST00000393287 MT2AP02795 61 aa3.51□□□□□ -1.85
ATXN3-203ENST00000393287 LRP2P98164 4655 aa3.49□□□□□ -1.85
ATXN3-203ENST00000393287 PKD1P98161 4303 aa3.47□□□□□ -1.85
ATXN3-203ENST00000393287 VPS13BQ7Z7G8 4022 aa3.47□□□□□ -1.85
ATXN3-203ENST00000393287 HECTD4Q9Y4D8 3996 aa3.46□□□□□ -1.86
ATXN3-203ENST00000393287 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
ATXN3-203ENST00000393287 PKHD1L1Q86WI1 4243 aa3.43□□□□□ -1.86
ATXN3-203ENST00000393287 MT1FP04733 61 aa3.42□□□□□ -1.86
ATXN3-203ENST00000393287 PKHD1P08F94 4074 aa3.4□□□□□ -1.87
ATXN3-203ENST00000393287 LCE2CQ5TA81 110 aa3.39□□□□□ -1.87
ATXN3-203ENST00000393287 FRAS1Q86XX4 4008 aa3.39□□□□□ -1.87
ATXN3-203ENST00000393287 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
ATXN3-203ENST00000393287 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
ATXN3-203ENST00000393287 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
ATXN3-203ENST00000393287 LORP23490 312 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-203ENST00000393287 FAT4Q6V0I7 4981 aa3.37□□□□□ -1.87
ATXN3-203ENST00000393287 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
ATXN3-203ENST00000393287 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
ATXN3-203ENST00000393287 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
ATXN3-203ENST00000393287 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
ATXN3-203ENST00000393287 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-203ENST00000393287 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
ATXN3-203ENST00000393287 INE1O15225 51 aa3.25□□□□□ -1.89
ATXN3-203ENST00000393287 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
ATXN3-203ENST00000393287 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
ATXN3-203ENST00000393287 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-203ENST00000393287 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
ATXN3-203ENST00000393287 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
ATXN3-203ENST00000393287 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
ATXN3-203ENST00000393287 TNXBP22105 4242 aa3.16□□□□□ -1.9
ATXN3-203ENST00000393287 MT1BP07438 61 aa3.15□□□□□ -1.9
ATXN3-203ENST00000393287 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
ATXN3-203ENST00000393287 LPAP08519 4548 aa3.12□□□□□ -1.91
ATXN3-203ENST00000393287 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
ATXN3-203ENST00000393287 LCE2BO14633 110 aa3.11□□□□□ -1.91
ATXN3-203ENST00000393287 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-203ENST00000393287 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
ATXN3-203ENST00000393287 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
ATXN3-203ENST00000393287 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
ATXN3-203ENST00000393287 MT1XP80297 61 aa3.05□□□□□ -1.92
ATXN3-203ENST00000393287 SPRR2EP22531 72 aa3.03□□□□□ -1.92
ATXN3-203ENST00000393287 SPRR2BP35325 72 aa3.03□□□□□ -1.92
ATXN3-203ENST00000393287 SPRR2AP35326 72 aa3.03□□□□□ -1.92
ATXN3-203ENST00000393287 FLGP20930 4061 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-203ENST00000393287 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
ATXN3-203ENST00000393287 USH2AO75445 5202 aa3.02□□□□□ -1.93
ATXN3-203ENST00000393287 MUC2Q02817 5179 aa3□□□□□ -1.93
ATXN3-203ENST00000393287 SPRR2DP22532 72 aa2.97□□□□□ -1.93
ATXN3-203ENST00000393287 MT1GP13640 62 aa2.93□□□□□ -1.94
ATXN3-203ENST00000393287 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
ATXN3-203ENST00000393287 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
ATXN3-203ENST00000393287 KRTAP4-8A0A0G2JLE6 195 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms