RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 FAT1Q14517 4588 aa8.73□□□□□ -1.01
TRA2A-202ENST00000392502 A0A1B0GVY2 172 aa8.73□□□□□ -1.01
TRA2A-202ENST00000392502 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.02
TRA2A-202ENST00000392502 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
TRA2A-202ENST00000392502 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
TRA2A-202ENST00000392502 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
TRA2A-202ENST00000392502 EPPK1P58107 5090 aaKnown RBP8.62□□□□□ -1.03
TRA2A-202ENST00000392502 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
TRA2A-202ENST00000392502 KRTAP3-1Q9BYR8 98 aa8.58□□□□□ -1.04
TRA2A-202ENST00000392502 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
TRA2A-202ENST00000392502 BIRC6Q9NR09 4857 aa8.55□□□□□ -1.04
TRA2A-202ENST00000392502 XP32Q5T750 250 aa8.46□□□□□ -1.05
TRA2A-202ENST00000392502 S4R3F8 94 aa8.46□□□□□ -1.05
TRA2A-202ENST00000392502 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
TRA2A-202ENST00000392502 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
TRA2A-202ENST00000392502 A0A0D9SG42 100 aa8.43□□□□□ -1.06
TRA2A-202ENST00000392502 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
TRA2A-202ENST00000392502 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
TRA2A-202ENST00000392502 HSPG2P98160 4391 aa8.37□□□□□ -1.07
TRA2A-202ENST00000392502 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
TRA2A-202ENST00000392502 TNXBP22105 4242 aa8.36□□□□□ -1.07
TRA2A-202ENST00000392502 KRTAP17-1Q9BYP8 105 aa8.34□□□□□ -1.07
TRA2A-202ENST00000392502 FAT3Q8TDW7 4589 aa8.33□□□□□ -1.08
TRA2A-202ENST00000392502 RYR1P21817 5038 aa8.33□□□□□ -1.08
TRA2A-202ENST00000392502 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
TRA2A-202ENST00000392502 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
TRA2A-202ENST00000392502 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
TRA2A-202ENST00000392502 KRTAP12-2P59991 146 aa8.27□□□□□ -1.09
TRA2A-202ENST00000392502 Q5VSD8 79 aa8.25□□□□□ -1.09
TRA2A-202ENST00000392502 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
TRA2A-202ENST00000392502 PCLOQ9Y6V0 5065 aa8.21□□□□□ -1.09
TRA2A-202ENST00000392502 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
TRA2A-202ENST00000392502 J3QL48 77 aa8.19□□□□□ -1.1
TRA2A-202ENST00000392502 HERC2O95714 4834 aa8.18□□□□□ -1.1
TRA2A-202ENST00000392502 MYCBP2O75592 4640 aa8.18□□□□□ -1.1
TRA2A-202ENST00000392502 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
TRA2A-202ENST00000392502 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
TRA2A-202ENST00000392502 M0QZ58 72 aa8.09□□□□□ -1.11
TRA2A-202ENST00000392502 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.12
TRA2A-202ENST00000392502 MT1HL1P0DM35 61 aa8.01□□□□□ -1.13
TRA2A-202ENST00000392502 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
TRA2A-202ENST00000392502 ABCA13Q86UQ4 5058 aa7.94□□□□□ -1.14
TRA2A-202ENST00000392502 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
TRA2A-202ENST00000392502 LPAP08519 4548 aa7.91□□□□□ -1.14
TRA2A-202ENST00000392502 LRP2P98164 4655 aa7.87□□□□□ -1.15
TRA2A-202ENST00000392502 HERC1Q15751 4861 aa7.74□□□□□ -1.17
TRA2A-202ENST00000392502 INE1O15225 51 aa7.68□□□□□ -1.18
TRA2A-202ENST00000392502 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
TRA2A-202ENST00000392502 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
TRA2A-202ENST00000392502 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.2
TRA2A-202ENST00000392502 R4GN34 69 aa7.52□□□□□ -1.2
TRA2A-202ENST00000392502 KRTAP4-1Q9BYQ7 146 aa7.46□□□□□ -1.22
TRA2A-202ENST00000392502 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
TRA2A-202ENST00000392502 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
TRA2A-202ENST00000392502 MUC2Q02817 5179 aa7.31□□□□□ -1.24
TRA2A-202ENST00000392502 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
TRA2A-202ENST00000392502 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
TRA2A-202ENST00000392502 TNP1P09430 55 aa7.2□□□□□ -1.26
TRA2A-202ENST00000392502 FLGP20930 4061 aaPredicted RBP7.15□□□□□ -1.26
TRA2A-202ENST00000392502 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
TRA2A-202ENST00000392502 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
TRA2A-202ENST00000392502 LCE2CQ5TA81 110 aa6.9□□□□□ -1.3
TRA2A-202ENST00000392502 MT1HP80294 61 aa6.7□□□□□ -1.34
TRA2A-202ENST00000392502 M0R2T5 61 aa6.68□□□□□ -1.34
TRA2A-202ENST00000392502 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.35
TRA2A-202ENST00000392502 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
TRA2A-202ENST00000392502 MT1FP04733 61 aa6.58□□□□□ -1.36
TRA2A-202ENST00000392502 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
TRA2A-202ENST00000392502 MT2AP02795 61 aa6.57□□□□□ -1.36
TRA2A-202ENST00000392502 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
TRA2A-202ENST00000392502 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
TRA2A-202ENST00000392502 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
TRA2A-202ENST00000392502 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
TRA2A-202ENST00000392502 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
TRA2A-202ENST00000392502 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.37
TRA2A-202ENST00000392502 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.37
TRA2A-202ENST00000392502 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
TRA2A-202ENST00000392502 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
TRA2A-202ENST00000392502 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
TRA2A-202ENST00000392502 MT1BP07438 61 aa6.32□□□□□ -1.4
TRA2A-202ENST00000392502 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
TRA2A-202ENST00000392502 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
TRA2A-202ENST00000392502 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
TRA2A-202ENST00000392502 MT1XP80297 61 aa6.23□□□□□ -1.41
TRA2A-202ENST00000392502 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
TRA2A-202ENST00000392502 LCE2BO14633 110 aa6.07□□□□□ -1.44
TRA2A-202ENST00000392502 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
TRA2A-202ENST00000392502 USH2AO75445 5202 aa6.04□□□□□ -1.44
TRA2A-202ENST00000392502 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
TRA2A-202ENST00000392502 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
TRA2A-202ENST00000392502 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
TRA2A-202ENST00000392502 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
TRA2A-202ENST00000392502 KMT2DO14686 5537 aa5.89□□□□□ -1.47
TRA2A-202ENST00000392502 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
TRA2A-202ENST00000392502 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
TRA2A-202ENST00000392502 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
TRA2A-202ENST00000392502 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
TRA2A-202ENST00000392502 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
TRA2A-202ENST00000392502 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
TRA2A-202ENST00000392502 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms