RNA–Protein interactions for RNA: ENST00000389398.9

VWA3A-202, Transcript of von Willebrand factor A domain containing 3A, humanhuman

APPRIS P2 TSL 5 BASIC

Gene VWA3A, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-202ENST00000389398 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
VWA3A-202ENST00000389398 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
VWA3A-202ENST00000389398 RYR1P21817 5038 aa3.62□□□□□ -1.83
VWA3A-202ENST00000389398 RYR3Q15413 4870 aa3.61□□□□□ -1.83
VWA3A-202ENST00000389398 HERC2O95714 4834 aa3.59□□□□□ -1.84
VWA3A-202ENST00000389398 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
VWA3A-202ENST00000389398 CSMD3Q7Z407 3707 aa3.56□□□□□ -1.84
VWA3A-202ENST00000389398 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
VWA3A-202ENST00000389398 LORP23490 312 aaPredicted RBP3.55□□□□□ -1.84
VWA3A-202ENST00000389398 ANK2Q01484 3957 aa3.55□□□□□ -1.84
VWA3A-202ENST00000389398 HUWE1Q7Z6Z7 4374 aaKnown RBP3.55□□□□□ -1.84
VWA3A-202ENST00000389398 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
VWA3A-202ENST00000389398 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
VWA3A-202ENST00000389398 PLECQ15149 4684 aaKnown RBP3.48□□□□□ -1.85
VWA3A-202ENST00000389398 PRKDCP78527 4128 aaKnown RBP3.48□□□□□ -1.85
VWA3A-202ENST00000389398 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
VWA3A-202ENST00000389398 KMT2CQ8NEZ4 4911 aaKnown RBP3.44□□□□□ -1.86
VWA3A-202ENST00000389398 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
VWA3A-202ENST00000389398 RYR2Q92736 4967 aa3.43□□□□□ -1.86
VWA3A-202ENST00000389398 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
VWA3A-202ENST00000389398 DNAH9Q9NYC9 4486 aa3.41□□□□□ -1.86
VWA3A-202ENST00000389398 DNAH11Q96DT5 4516 aa3.41□□□□□ -1.86
VWA3A-202ENST00000389398 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.86
VWA3A-202ENST00000389398 LYSTQ99698 3801 aa3.4□□□□□ -1.86
VWA3A-202ENST00000389398 DNAH5Q8TE73 4624 aa3.4□□□□□ -1.86
VWA3A-202ENST00000389398 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.86
VWA3A-202ENST00000389398 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
VWA3A-202ENST00000389398 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
VWA3A-202ENST00000389398 DNAH10Q8IVF4 4471 aa3.37□□□□□ -1.87
VWA3A-202ENST00000389398 LCE2CQ5TA81 110 aa3.37□□□□□ -1.87
VWA3A-202ENST00000389398 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
VWA3A-202ENST00000389398 ALMS1Q8TCU4 4167 aa3.35□□□□□ -1.87
VWA3A-202ENST00000389398 CMYA5Q8N3K9 4069 aa3.33□□□□□ -1.88
VWA3A-202ENST00000389398 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
VWA3A-202ENST00000389398 LCE2BO14633 110 aa3.32□□□□□ -1.88
VWA3A-202ENST00000389398 VPS13DQ5THJ4 4388 aa3.3□□□□□ -1.88
VWA3A-202ENST00000389398 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
VWA3A-202ENST00000389398 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
VWA3A-202ENST00000389398 FAT1Q14517 4588 aa3.29□□□□□ -1.88
VWA3A-202ENST00000389398 DNAH17Q9UFH2 4485 aa3.29□□□□□ -1.88
VWA3A-202ENST00000389398 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.89
VWA3A-202ENST00000389398 DNAH7Q8WXX0 4024 aa3.27□□□□□ -1.89
VWA3A-202ENST00000389398 STARD9Q9P2P6 4700 aa3.26□□□□□ -1.89
VWA3A-202ENST00000389398 DNAH8Q96JB1 4490 aa3.24□□□□□ -1.89
VWA3A-202ENST00000389398 DNAH3Q8TD57 4116 aa3.23□□□□□ -1.89
VWA3A-202ENST00000389398 SACSQ9NZJ4 4579 aa3.21□□□□□ -1.89
VWA3A-202ENST00000389398 DYNC2H1Q8NCM8 4307 aaKnown RBP3.2□□□□□ -1.9
VWA3A-202ENST00000389398 DNAH2Q9P225 4427 aa3.2□□□□□ -1.9
VWA3A-202ENST00000389398 LRP2P98164 4655 aa3.2□□□□□ -1.9
VWA3A-202ENST00000389398 MT1HP80294 61 aa3.2□□□□□ -1.9
VWA3A-202ENST00000389398 LRP1BQ9NZR2 4599 aa3.19□□□□□ -1.9
VWA3A-202ENST00000389398 HERC1Q15751 4861 aa3.17□□□□□ -1.9
VWA3A-202ENST00000389398 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
VWA3A-202ENST00000389398 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
VWA3A-202ENST00000389398 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
VWA3A-202ENST00000389398 APOBP04114 4563 aaKnown RBP3.12□□□□□ -1.91
VWA3A-202ENST00000389398 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
VWA3A-202ENST00000389398 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
VWA3A-202ENST00000389398 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
VWA3A-202ENST00000389398 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
VWA3A-202ENST00000389398 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
VWA3A-202ENST00000389398 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
VWA3A-202ENST00000389398 VPS13BQ7Z7G8 4022 aa3.07□□□□□ -1.92
VWA3A-202ENST00000389398 HECTD4Q9Y4D8 3996 aa3.07□□□□□ -1.92
VWA3A-202ENST00000389398 DNAH6Q9C0G6 4158 aa3.05□□□□□ -1.92
VWA3A-202ENST00000389398 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
VWA3A-202ENST00000389398 FAT2Q9NYQ8 4349 aa3.05□□□□□ -1.92
VWA3A-202ENST00000389398 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
VWA3A-202ENST00000389398 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
VWA3A-202ENST00000389398 SPRR2EP22531 72 aa3.03□□□□□ -1.92
VWA3A-202ENST00000389398 SPRR2BP35325 72 aa3.03□□□□□ -1.92
VWA3A-202ENST00000389398 SPRR2AP35326 72 aa3.03□□□□□ -1.92
VWA3A-202ENST00000389398 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
VWA3A-202ENST00000389398 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
VWA3A-202ENST00000389398 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
VWA3A-202ENST00000389398 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
VWA3A-202ENST00000389398 LRP1Q07954 4544 aaKnown RBP3.01□□□□□ -1.93
VWA3A-202ENST00000389398 MT2AP02795 61 aa3.01□□□□□ -1.93
VWA3A-202ENST00000389398 KRTAP12-4P60329 112 aa3□□□□□ -1.93
VWA3A-202ENST00000389398 HSPG2P98160 4391 aa2.96□□□□□ -1.93
VWA3A-202ENST00000389398 PKHD1P08F94 4074 aa2.95□□□□□ -1.94
VWA3A-202ENST00000389398 SPRR2DP22532 72 aa2.94□□□□□ -1.94
VWA3A-202ENST00000389398 MT1FP04733 61 aa2.94□□□□□ -1.94
VWA3A-202ENST00000389398 SPRR2GQ9BYE4 73 aa2.91□□□□□ -1.94
VWA3A-202ENST00000389398 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
VWA3A-202ENST00000389398 HMCN2Q8NDA2 5059 aa2.9□□□□□ -1.94
VWA3A-202ENST00000389398 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
VWA3A-202ENST00000389398 PKD1P98161 4303 aa2.88□□□□□ -1.95
VWA3A-202ENST00000389398 MUC2Q02817 5179 aa2.87□□□□□ -1.95
VWA3A-202ENST00000389398 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
VWA3A-202ENST00000389398 FAT4Q6V0I7 4981 aa2.86□□□□□ -1.95
VWA3A-202ENST00000389398 KMT2DO14686 5537 aa2.85□□□□□ -1.95
VWA3A-202ENST00000389398 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
VWA3A-202ENST00000389398 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
VWA3A-202ENST00000389398 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
VWA3A-202ENST00000389398 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
VWA3A-202ENST00000389398 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
VWA3A-202ENST00000389398 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
VWA3A-202ENST00000389398 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
VWA3A-202ENST00000389398 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms