RNA–Protein interactions for RNA: ENST00000381718.7

NUP58-201, Transcript of nucleoporin 58, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene NUP58, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-201ENST00000381718 SEC61GP60059 68 aa8.27□□□□□ -1.09
NUP58-201ENST00000381718 BIRC6Q9NR09 4857 aa8.27□□□□□ -1.09
NUP58-201ENST00000381718 UQCR11O14957 56 aa8.26□□□□□ -1.09
NUP58-201ENST00000381718 LPAP08519 4548 aa8.25□□□□□ -1.09
NUP58-201ENST00000381718 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
NUP58-201ENST00000381718 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
NUP58-201ENST00000381718 J3QL48 77 aa8.2□□□□□ -1.1
NUP58-201ENST00000381718 MIR22HGQ0VDD5 57 aa8.19□□□□□ -1.1
NUP58-201ENST00000381718 PMAIP1Q13794 54 aa8.18□□□□□ -1.1
NUP58-201ENST00000381718 S4R3F8 94 aa8.16□□□□□ -1.1
NUP58-201ENST00000381718 H1FX-AS1Q4G0G2 97 aa8.15□□□□□ -1.1
NUP58-201ENST00000381718 A6NN06 94 aa8.13□□□□□ -1.11
NUP58-201ENST00000381718 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
NUP58-201ENST00000381718 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
NUP58-201ENST00000381718 A0A1B0GU33 70 aa8.09□□□□□ -1.11
NUP58-201ENST00000381718 H0YAA0 97 aa8.06□□□□□ -1.12
NUP58-201ENST00000381718 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
NUP58-201ENST00000381718 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
NUP58-201ENST00000381718 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
NUP58-201ENST00000381718 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
NUP58-201ENST00000381718 KTN1-AS1Q86SY8 53 aa7.96□□□□□ -1.14
NUP58-201ENST00000381718 CSAG1Q6PB30 78 aa7.93□□□□□ -1.14
NUP58-201ENST00000381718 P0C880 135 aa7.88□□□□□ -1.15
NUP58-201ENST00000381718 PCLOQ9Y6V0 5065 aa7.88□□□□□ -1.15
NUP58-201ENST00000381718 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
NUP58-201ENST00000381718 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
NUP58-201ENST00000381718 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
NUP58-201ENST00000381718 HERC1Q15751 4861 aa7.83□□□□□ -1.16
NUP58-201ENST00000381718 HMCN2Q8NDA2 5059 aa7.81□□□□□ -1.16
NUP58-201ENST00000381718 K7ERS5 55 aa7.71□□□□□ -1.17
NUP58-201ENST00000381718 M0QZ58 72 aa7.7□□□□□ -1.18
NUP58-201ENST00000381718 MUC2Q02817 5179 aa7.7□□□□□ -1.18
NUP58-201ENST00000381718 A0A0D9SG42 100 aa7.68□□□□□ -1.18
NUP58-201ENST00000381718 FLGP20930 4061 aaPredicted RBP7.66□□□□□ -1.18
NUP58-201ENST00000381718 PRAC1Q96KF2 57 aa7.63□□□□□ -1.19
NUP58-201ENST00000381718 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
NUP58-201ENST00000381718 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
NUP58-201ENST00000381718 R4GN34 69 aa7.53□□□□□ -1.2
NUP58-201ENST00000381718 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
NUP58-201ENST00000381718 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
NUP58-201ENST00000381718 ROMO1P60602 79 aa7.5□□□□□ -1.21
NUP58-201ENST00000381718 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.22
NUP58-201ENST00000381718 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.23
NUP58-201ENST00000381718 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
NUP58-201ENST00000381718 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
NUP58-201ENST00000381718 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
NUP58-201ENST00000381718 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
NUP58-201ENST00000381718 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
NUP58-201ENST00000381718 MT1HP80294 61 aa7.31□□□□□ -1.24
NUP58-201ENST00000381718 M0R2T5 61 aa7.2□□□□□ -1.26
NUP58-201ENST00000381718 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
NUP58-201ENST00000381718 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
NUP58-201ENST00000381718 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
NUP58-201ENST00000381718 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
NUP58-201ENST00000381718 MT2AP02795 61 aa7.1□□□□□ -1.27
NUP58-201ENST00000381718 MT1FP04733 61 aa7.08□□□□□ -1.28
NUP58-201ENST00000381718 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
NUP58-201ENST00000381718 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
NUP58-201ENST00000381718 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
NUP58-201ENST00000381718 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
NUP58-201ENST00000381718 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
NUP58-201ENST00000381718 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
NUP58-201ENST00000381718 TNP1P09430 55 aa6.82□□□□□ -1.32
NUP58-201ENST00000381718 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
NUP58-201ENST00000381718 MT1BP07438 61 aa6.79□□□□□ -1.32
NUP58-201ENST00000381718 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
NUP58-201ENST00000381718 H3BS24 57 aa6.76□□□□□ -1.33
NUP58-201ENST00000381718 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
NUP58-201ENST00000381718 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
NUP58-201ENST00000381718 MT1XP80297 61 aa6.65□□□□□ -1.34
NUP58-201ENST00000381718 LCE2BO14633 110 aa6.59□□□□□ -1.35
NUP58-201ENST00000381718 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
NUP58-201ENST00000381718 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
NUP58-201ENST00000381718 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
NUP58-201ENST00000381718 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
NUP58-201ENST00000381718 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
NUP58-201ENST00000381718 USH2AO75445 5202 aa6.33□□□□□ -1.4
NUP58-201ENST00000381718 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
NUP58-201ENST00000381718 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
NUP58-201ENST00000381718 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
NUP58-201ENST00000381718 SSPOA2VEC9 5147 aa6.12□□□□□ -1.43
NUP58-201ENST00000381718 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
NUP58-201ENST00000381718 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
NUP58-201ENST00000381718 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
NUP58-201ENST00000381718 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
NUP58-201ENST00000381718 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
NUP58-201ENST00000381718 KMT2DO14686 5537 aa6.03□□□□□ -1.44
NUP58-201ENST00000381718 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
NUP58-201ENST00000381718 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
NUP58-201ENST00000381718 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
NUP58-201ENST00000381718 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
NUP58-201ENST00000381718 MT1EP04732 61 aa5.8□□□□□ -1.48
NUP58-201ENST00000381718 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
NUP58-201ENST00000381718 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
NUP58-201ENST00000381718 MT1LQ93083 61 aa5.73□□□□□ -1.49
NUP58-201ENST00000381718 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
NUP58-201ENST00000381718 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
NUP58-201ENST00000381718 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
NUP58-201ENST00000381718 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
NUP58-201ENST00000381718 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms