RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 MT2AP02795 61 aa6.44□□□□□ -1.38
RPAIN-202ENST00000381208 Q8N9L7 120 aa6.43□□□□□ -1.38
RPAIN-202ENST00000381208 TMEM258P61165 79 aa6.42□□□□□ -1.38
RPAIN-202ENST00000381208 Q8N9P0 234 aaPredicted RBP6.42□□□□□ -1.38
RPAIN-202ENST00000381208 A8MWP4 228 aa6.41□□□□□ -1.38
RPAIN-202ENST00000381208 K7EQZ3 153 aa6.41□□□□□ -1.38
RPAIN-202ENST00000381208 SPINK7P58062 85 aa6.41□□□□□ -1.38
RPAIN-202ENST00000381208 HCG22E2RYF7 251 aa6.4□□□□□ -1.39
RPAIN-202ENST00000381208 USH2AO75445 5202 aa6.39□□□□□ -1.39
RPAIN-202ENST00000381208 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
RPAIN-202ENST00000381208 MT1FP04733 61 aa6.38□□□□□ -1.39
RPAIN-202ENST00000381208 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
RPAIN-202ENST00000381208 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
RPAIN-202ENST00000381208 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
RPAIN-202ENST00000381208 OCR1Q9BZK8 76 aa6.36□□□□□ -1.39
RPAIN-202ENST00000381208 KLKP1Q107X0 134 aa6.34□□□□□ -1.39
RPAIN-202ENST00000381208 NDUFC1O43677 76 aa6.33□□□□□ -1.4
RPAIN-202ENST00000381208 C20orf197Q8N268 126 aa6.33□□□□□ -1.4
RPAIN-202ENST00000381208 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
RPAIN-202ENST00000381208 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
RPAIN-202ENST00000381208 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
RPAIN-202ENST00000381208 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
RPAIN-202ENST00000381208 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
RPAIN-202ENST00000381208 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
RPAIN-202ENST00000381208 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
RPAIN-202ENST00000381208 SMIM26A0A096LP01 95 aa6.26□□□□□ -1.41
RPAIN-202ENST00000381208 NDUFS5O43920 106 aa6.26□□□□□ -1.41
RPAIN-202ENST00000381208 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
RPAIN-202ENST00000381208 MP68P56378 58 aa6.25□□□□□ -1.41
RPAIN-202ENST00000381208 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
RPAIN-202ENST00000381208 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
RPAIN-202ENST00000381208 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
RPAIN-202ENST00000381208 H3BPC8 53 aa6.24□□□□□ -1.41
RPAIN-202ENST00000381208 ATP5EP56381 51 aaPredicted RBP6.24□□□□□ -1.41
RPAIN-202ENST00000381208 SNURFQ9Y675 71 aa6.24□□□□□ -1.41
RPAIN-202ENST00000381208 H7BZZ5 65 aa6.23□□□□□ -1.41
RPAIN-202ENST00000381208 CYSTM1Q9H1C7 97 aa6.23□□□□□ -1.41
RPAIN-202ENST00000381208 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
RPAIN-202ENST00000381208 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.41
RPAIN-202ENST00000381208 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
RPAIN-202ENST00000381208 H0Y9P7 68 aa6.18□□□□□ -1.42
RPAIN-202ENST00000381208 KRTAP19-6Q3LI70 58 aa6.18□□□□□ -1.42
RPAIN-202ENST00000381208 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.18□□□□□ -1.42
RPAIN-202ENST00000381208 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
RPAIN-202ENST00000381208 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
RPAIN-202ENST00000381208 IGKV2-30P06310 120 aa6.15□□□□□ -1.43
RPAIN-202ENST00000381208 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
RPAIN-202ENST00000381208 LINC00208Q96KT6 92 aa6.14□□□□□ -1.43
RPAIN-202ENST00000381208 LCA10Q71F78 164 aa6.13□□□□□ -1.43
RPAIN-202ENST00000381208 A8MUN3 132 aa6.12□□□□□ -1.43
RPAIN-202ENST00000381208 PSPHP1O15172 72 aa6.12□□□□□ -1.43
RPAIN-202ENST00000381208 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
RPAIN-202ENST00000381208 Q5W150 140 aa6.09□□□□□ -1.43
RPAIN-202ENST00000381208 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
RPAIN-202ENST00000381208 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
RPAIN-202ENST00000381208 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
RPAIN-202ENST00000381208 CYP4F30PQ9H0H9 118 aa6.06□□□□□ -1.44
RPAIN-202ENST00000381208 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.45
RPAIN-202ENST00000381208 CSAG1Q6PB30 78 aa5.96□□□□□ -1.45
RPAIN-202ENST00000381208 S4R3F8 94 aa5.95□□□□□ -1.46
RPAIN-202ENST00000381208 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
RPAIN-202ENST00000381208 Q5VV11 94 aa5.88□□□□□ -1.47
RPAIN-202ENST00000381208 A6NN06 94 aa5.87□□□□□ -1.47
RPAIN-202ENST00000381208 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
RPAIN-202ENST00000381208 ACYP2P14621 99 aa5.85□□□□□ -1.47
RPAIN-202ENST00000381208 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
RPAIN-202ENST00000381208 COA5Q86WW8 74 aa5.85□□□□□ -1.47
RPAIN-202ENST00000381208 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
RPAIN-202ENST00000381208 MT1BP07438 61 aa5.82□□□□□ -1.48
RPAIN-202ENST00000381208 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
RPAIN-202ENST00000381208 Q1T7F1 81 aa5.82□□□□□ -1.48
RPAIN-202ENST00000381208 KRTAP5-11Q6L8G4 156 aa5.82□□□□□ -1.48
RPAIN-202ENST00000381208 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
RPAIN-202ENST00000381208 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
RPAIN-202ENST00000381208 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
RPAIN-202ENST00000381208 NEBP20929 6669 aa5.74□□□□□ -1.49
RPAIN-202ENST00000381208 H0YAA0 97 aa5.69□□□□□ -1.5
RPAIN-202ENST00000381208 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
RPAIN-202ENST00000381208 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
RPAIN-202ENST00000381208 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.51
RPAIN-202ENST00000381208 PRR15LQ9BU68 103 aa5.65□□□□□ -1.51
RPAIN-202ENST00000381208 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
RPAIN-202ENST00000381208 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
RPAIN-202ENST00000381208 A0A1B0GU69 56 aa5.56□□□□□ -1.52
RPAIN-202ENST00000381208 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
RPAIN-202ENST00000381208 ADM2Q7Z4H4 148 aa5.56□□□□□ -1.52
RPAIN-202ENST00000381208 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
RPAIN-202ENST00000381208 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
RPAIN-202ENST00000381208 KMT2DO14686 5537 aa5.53□□□□□ -1.52
RPAIN-202ENST00000381208 A6NED7 52 aa5.53□□□□□ -1.52
RPAIN-202ENST00000381208 K7ERS5 55 aa5.53□□□□□ -1.52
RPAIN-202ENST00000381208 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
RPAIN-202ENST00000381208 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
RPAIN-202ENST00000381208 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
RPAIN-202ENST00000381208 R4GN34 69 aa5.48□□□□□ -1.53
RPAIN-202ENST00000381208 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
RPAIN-202ENST00000381208 ROMO1P60602 79 aa5.45□□□□□ -1.54
RPAIN-202ENST00000381208 UQCR11O14957 56 aa5.44□□□□□ -1.54
RPAIN-202ENST00000381208 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
RPAIN-202ENST00000381208 MT1XP80297 61 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms