RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 FAT4Q6V0I7 4981 aa10.01□□□□□ -0.81
TSSC4-203ENST00000380996 FLGP20930 4061 aaPredicted RBP9.98□□□□□ -0.81
TSSC4-203ENST00000380996 SPTSSBQ8NFR3 76 aa9.96□□□□□ -0.82
TSSC4-203ENST00000380996 SERP1Q9Y6X1 66 aa9.96□□□□□ -0.82
TSSC4-203ENST00000380996 MT1HP80294 61 aa9.94□□□□□ -0.82
TSSC4-203ENST00000380996 LCE2AQ5TA79 106 aaPredicted RBP9.92□□□□□ -0.82
TSSC4-203ENST00000380996 CSAG1Q6PB30 78 aa9.92□□□□□ -0.82
TSSC4-203ENST00000380996 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
TSSC4-203ENST00000380996 M0R2T5 61 aa9.9□□□□□ -0.82
TSSC4-203ENST00000380996 RPS28P62857 69 aaKnown RBP9.82□□□□□ -0.84
TSSC4-203ENST00000380996 SMIM26A0A096LP01 95 aa9.66□□□□□ -0.86
TSSC4-203ENST00000380996 H0YAA0 97 aa9.66□□□□□ -0.86
TSSC4-203ENST00000380996 KRTAP10-6P60371 365 aaPredicted RBP9.63□□□□□ -0.87
TSSC4-203ENST00000380996 SEC61GP60059 68 aa9.61□□□□□ -0.87
TSSC4-203ENST00000380996 ADM2Q7Z4H4 148 aa9.59□□□□□ -0.87
TSSC4-203ENST00000380996 LINC01558Q9Y6Z2 57 aa9.58□□□□□ -0.88
TSSC4-203ENST00000380996 V9GYY9 64 aa9.58□□□□□ -0.88
TSSC4-203ENST00000380996 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
TSSC4-203ENST00000380996 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
TSSC4-203ENST00000380996 A0A1B0GU69 56 aa9.54□□□□□ -0.88
TSSC4-203ENST00000380996 Q1T7F1 81 aa9.53□□□□□ -0.88
TSSC4-203ENST00000380996 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
TSSC4-203ENST00000380996 PRR15LQ9BU68 103 aa9.51□□□□□ -0.89
TSSC4-203ENST00000380996 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
TSSC4-203ENST00000380996 MT2AP02795 61 aa9.48□□□□□ -0.89
TSSC4-203ENST00000380996 P0C880 135 aa9.46□□□□□ -0.89
TSSC4-203ENST00000380996 SVIPQ8NHG7 77 aa9.45□□□□□ -0.9
TSSC4-203ENST00000380996 KRTAP10-10P60014 251 aa9.44□□□□□ -0.9
TSSC4-203ENST00000380996 MT1FP04733 61 aa9.41□□□□□ -0.9
TSSC4-203ENST00000380996 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
TSSC4-203ENST00000380996 PSPHP1O15172 72 aa9.36□□□□□ -0.91
TSSC4-203ENST00000380996 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
TSSC4-203ENST00000380996 A0A1B0GU33 70 aa9.34□□□□□ -0.91
TSSC4-203ENST00000380996 R4GN34 69 aa9.31□□□□□ -0.92
TSSC4-203ENST00000380996 M0QZ58 72 aa9.27□□□□□ -0.93
TSSC4-203ENST00000380996 Q5VV11 94 aa9.26□□□□□ -0.93
TSSC4-203ENST00000380996 UQCR11O14957 56 aa9.21□□□□□ -0.93
TSSC4-203ENST00000380996 KRTAP9-3Q9BYQ3 159 aa9.21□□□□□ -0.93
TSSC4-203ENST00000380996 KRTAP9-6A0A140TA67 174 aa9.2□□□□□ -0.94
TSSC4-203ENST00000380996 SPRR2GQ9BYE4 73 aa9.18□□□□□ -0.94
TSSC4-203ENST00000380996 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
TSSC4-203ENST00000380996 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.95
TSSC4-203ENST00000380996 KRTAP19-1Q8IUB9 90 aa9.15□□□□□ -0.95
TSSC4-203ENST00000380996 A6NED7 52 aa9.11□□□□□ -0.95
TSSC4-203ENST00000380996 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
TSSC4-203ENST00000380996 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
TSSC4-203ENST00000380996 MIR22HGQ0VDD5 57 aa9.06□□□□□ -0.96
TSSC4-203ENST00000380996 CRCT1Q9UGL9 99 aa9.06□□□□□ -0.96
TSSC4-203ENST00000380996 A0A0D9SG42 100 aa9.01□□□□□ -0.97
TSSC4-203ENST00000380996 LCE2BO14633 110 aa8.97□□□□□ -0.97
TSSC4-203ENST00000380996 KRTAP19-8Q3LI54 63 aa8.97□□□□□ -0.97
TSSC4-203ENST00000380996 A8MU10 97 aa8.96□□□□□ -0.97
TSSC4-203ENST00000380996 A6NN06 94 aa8.95□□□□□ -0.98
TSSC4-203ENST00000380996 CDC42SE1Q9NRR8 79 aa8.9□□□□□ -0.98
TSSC4-203ENST00000380996 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
TSSC4-203ENST00000380996 MT1BP07438 61 aa8.85□□□□□ -0.99
TSSC4-203ENST00000380996 SPINT4Q6UDR6 99 aa8.84□□□□□ -0.99
TSSC4-203ENST00000380996 KRTAP12-1P59990 96 aa8.83□□□□□ -1
TSSC4-203ENST00000380996 USH2AO75445 5202 aa8.8□□□□□ -1
TSSC4-203ENST00000380996 BRK1Q8WUW1 75 aa8.79□□□□□ -1
TSSC4-203ENST00000380996 K7ERS5 55 aa8.78□□□□□ -1
TSSC4-203ENST00000380996 KRTAP12-2P59991 146 aa8.78□□□□□ -1
TSSC4-203ENST00000380996 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
TSSC4-203ENST00000380996 SSPOA2VEC9 5147 aa8.69□□□□□ -1.02
TSSC4-203ENST00000380996 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
TSSC4-203ENST00000380996 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
TSSC4-203ENST00000380996 MT1XP80297 61 aa8.5□□□□□ -1.05
TSSC4-203ENST00000380996 KRTAP10-5P60370 271 aa8.49□□□□□ -1.05
TSSC4-203ENST00000380996 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
TSSC4-203ENST00000380996 PRO0628Q9UI54 55 aa8.45□□□□□ -1.06
TSSC4-203ENST00000380996 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
TSSC4-203ENST00000380996 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
TSSC4-203ENST00000380996 PMAIP1Q13794 54 aa8.32□□□□□ -1.08
TSSC4-203ENST00000380996 ROMO1P60602 79 aa8.3□□□□□ -1.08
TSSC4-203ENST00000380996 KRTAP9-7A8MTY7 169 aa8.28□□□□□ -1.08
TSSC4-203ENST00000380996 TNP1P09430 55 aa8.22□□□□□ -1.09
TSSC4-203ENST00000380996 MACF1Q9UPN3 7388 aaKnown RBP8.17□□□□□ -1.1
TSSC4-203ENST00000380996 KRTAP25-1Q3LHN0 102 aa8.16□□□□□ -1.1
TSSC4-203ENST00000380996 KRTAP10-7P60409 375 aaPredicted RBP8.13□□□□□ -1.11
TSSC4-203ENST00000380996 KRTAP10-12P60413 245 aa8.08□□□□□ -1.12
TSSC4-203ENST00000380996 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
TSSC4-203ENST00000380996 KRTAP6-3Q3LI67 103 aa7.93□□□□□ -1.14
TSSC4-203ENST00000380996 KRTAP23-1A1A580 65 aa7.9□□□□□ -1.14
TSSC4-203ENST00000380996 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
TSSC4-203ENST00000380996 KTN1-AS1Q86SY8 53 aa7.87□□□□□ -1.15
TSSC4-203ENST00000380996 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
TSSC4-203ENST00000380996 LCE3AQ5TA76 89 aa7.86□□□□□ -1.15
TSSC4-203ENST00000380996 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
TSSC4-203ENST00000380996 KMT2DO14686 5537 aa7.8□□□□□ -1.16
TSSC4-203ENST00000380996 KRTAP8-1Q8IUC2 63 aa7.8□□□□□ -1.16
TSSC4-203ENST00000380996 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
TSSC4-203ENST00000380996 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
TSSC4-203ENST00000380996 KRTAP5-9P26371 169 aa7.6□□□□□ -1.19
TSSC4-203ENST00000380996 NEBP20929 6669 aa7.59□□□□□ -1.19
TSSC4-203ENST00000380996 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
TSSC4-203ENST00000380996 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
TSSC4-203ENST00000380996 SPRR2FQ96RM1 72 aa7.56□□□□□ -1.2
TSSC4-203ENST00000380996 MUC12Q9UKN1 5478 aa7.54□□□□□ -1.2
TSSC4-203ENST00000380996 MT1EP04732 61 aa7.48□□□□□ -1.21
TSSC4-203ENST00000380996 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms