RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
USP3-202ENST00000380324 HERC2O95714 4834 aa6.22□□□□□ -1.41
USP3-202ENST00000380324 J3QL48 77 aa6.2□□□□□ -1.42
USP3-202ENST00000380324 LCA10Q71F78 164 aa6.2□□□□□ -1.42
USP3-202ENST00000380324 SPTSSBQ8NFR3 76 aa6.19□□□□□ -1.42
USP3-202ENST00000380324 BIRC6Q9NR09 4857 aa6.18□□□□□ -1.42
USP3-202ENST00000380324 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
USP3-202ENST00000380324 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
USP3-202ENST00000380324 UQCR11O14957 56 aa6.08□□□□□ -1.44
USP3-202ENST00000380324 S4R3F8 94 aa6.07□□□□□ -1.44
USP3-202ENST00000380324 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
USP3-202ENST00000380324 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
USP3-202ENST00000380324 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
USP3-202ENST00000380324 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.45
USP3-202ENST00000380324 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
USP3-202ENST00000380324 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
USP3-202ENST00000380324 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
USP3-202ENST00000380324 A0A1B0GU33 70 aa5.98□□□□□ -1.45
USP3-202ENST00000380324 H0YAA0 97 aa5.97□□□□□ -1.45
USP3-202ENST00000380324 HERC1Q15751 4861 aa5.96□□□□□ -1.46
USP3-202ENST00000380324 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
USP3-202ENST00000380324 A6NN06 94 aa5.94□□□□□ -1.46
USP3-202ENST00000380324 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
USP3-202ENST00000380324 KRTAP10-6P60371 365 aaPredicted RBP5.91□□□□□ -1.46
USP3-202ENST00000380324 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
USP3-202ENST00000380324 MUC2Q02817 5179 aa5.88□□□□□ -1.47
USP3-202ENST00000380324 P0C880 135 aa5.87□□□□□ -1.47
USP3-202ENST00000380324 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
USP3-202ENST00000380324 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
USP3-202ENST00000380324 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
USP3-202ENST00000380324 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
USP3-202ENST00000380324 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
USP3-202ENST00000380324 A0A0D9SG42 100 aa5.79□□□□□ -1.48
USP3-202ENST00000380324 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
USP3-202ENST00000380324 K7ERS5 55 aa5.71□□□□□ -1.5
USP3-202ENST00000380324 PRAC1Q96KF2 57 aa5.7□□□□□ -1.5
USP3-202ENST00000380324 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
USP3-202ENST00000380324 M0QZ58 72 aa5.64□□□□□ -1.51
USP3-202ENST00000380324 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
USP3-202ENST00000380324 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
USP3-202ENST00000380324 R4GN34 69 aa5.62□□□□□ -1.51
USP3-202ENST00000380324 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
USP3-202ENST00000380324 LINC01554Q52M75 96 aa5.61□□□□□ -1.51
USP3-202ENST00000380324 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
USP3-202ENST00000380324 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
USP3-202ENST00000380324 RNF213Q63HN8 5207 aa5.59□□□□□ -1.51
USP3-202ENST00000380324 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
USP3-202ENST00000380324 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
USP3-202ENST00000380324 ROMO1P60602 79 aa5.52□□□□□ -1.53
USP3-202ENST00000380324 CRIPTQ9P021 101 aa5.5□□□□□ -1.53
USP3-202ENST00000380324 M0R2T5 61 aa5.47□□□□□ -1.53
USP3-202ENST00000380324 MT1HP80294 61 aa5.44□□□□□ -1.54
USP3-202ENST00000380324 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
USP3-202ENST00000380324 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
USP3-202ENST00000380324 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
USP3-202ENST00000380324 MT2AP02795 61 aa5.28□□□□□ -1.56
USP3-202ENST00000380324 MT1FP04733 61 aa5.28□□□□□ -1.56
USP3-202ENST00000380324 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
USP3-202ENST00000380324 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
USP3-202ENST00000380324 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
USP3-202ENST00000380324 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
USP3-202ENST00000380324 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
USP3-202ENST00000380324 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
USP3-202ENST00000380324 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
USP3-202ENST00000380324 TNP1P09430 55 aa5.04□□□□□ -1.6
USP3-202ENST00000380324 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
USP3-202ENST00000380324 MT1BP07438 61 aa5.02□□□□□ -1.61
USP3-202ENST00000380324 LCE2BO14633 110 aa5.02□□□□□ -1.61
USP3-202ENST00000380324 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
USP3-202ENST00000380324 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
USP3-202ENST00000380324 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
USP3-202ENST00000380324 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
USP3-202ENST00000380324 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
USP3-202ENST00000380324 MT1XP80297 61 aa4.92□□□□□ -1.62
USP3-202ENST00000380324 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
USP3-202ENST00000380324 USH2AO75445 5202 aa4.88□□□□□ -1.63
USP3-202ENST00000380324 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
USP3-202ENST00000380324 LCE3AQ5TA76 89 aa4.84□□□□□ -1.64
USP3-202ENST00000380324 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
USP3-202ENST00000380324 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
USP3-202ENST00000380324 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
USP3-202ENST00000380324 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
USP3-202ENST00000380324 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
USP3-202ENST00000380324 KMT2DO14686 5537 aa4.64□□□□□ -1.67
USP3-202ENST00000380324 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
USP3-202ENST00000380324 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
USP3-202ENST00000380324 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
USP3-202ENST00000380324 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
USP3-202ENST00000380324 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
USP3-202ENST00000380324 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
USP3-202ENST00000380324 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
USP3-202ENST00000380324 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
USP3-202ENST00000380324 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
USP3-202ENST00000380324 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
USP3-202ENST00000380324 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
USP3-202ENST00000380324 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.72
USP3-202ENST00000380324 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
USP3-202ENST00000380324 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
USP3-202ENST00000380324 MT1EP04732 61 aa4.28□□□□□ -1.72
USP3-202ENST00000380324 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms