RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
PCDHGA1-201ENST00000378105 TP53AIP1Q9HCN2 124 aa6.3□□□□□ -1.4
PCDHGA1-201ENST00000378105 A0A087X002 238 aa6.27□□□□□ -1.41
PCDHGA1-201ENST00000378105 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
PCDHGA1-201ENST00000378105 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
PCDHGA1-201ENST00000378105 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
PCDHGA1-201ENST00000378105 SPRR1BP22528 89 aa6.22□□□□□ -1.41
PCDHGA1-201ENST00000378105 DMAC1Q96GE9 116 aa6.22□□□□□ -1.41
PCDHGA1-201ENST00000378105 Q5W150 140 aa6.2□□□□□ -1.42
PCDHGA1-201ENST00000378105 NOTCH2NLQ7Z3S9 236 aa6.2□□□□□ -1.42
PCDHGA1-201ENST00000378105 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
PCDHGA1-201ENST00000378105 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
PCDHGA1-201ENST00000378105 H0YAA0 97 aa6.14□□□□□ -1.43
PCDHGA1-201ENST00000378105 Q8N1X5 172 aa6.12□□□□□ -1.43
PCDHGA1-201ENST00000378105 HERC1Q15751 4861 aa6.12□□□□□ -1.43
PCDHGA1-201ENST00000378105 MUC17Q685J3 4493 aa6.1□□□□□ -1.43
PCDHGA1-201ENST00000378105 MUC2Q02817 5179 aa6.1□□□□□ -1.43
PCDHGA1-201ENST00000378105 TPRXLQ17RH7 258 aa6.09□□□□□ -1.43
PCDHGA1-201ENST00000378105 Q6ZSA8 131 aa6.08□□□□□ -1.44
PCDHGA1-201ENST00000378105 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
PCDHGA1-201ENST00000378105 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
PCDHGA1-201ENST00000378105 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
PCDHGA1-201ENST00000378105 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
PCDHGA1-201ENST00000378105 A0A1B0GU33 70 aa5.99□□□□□ -1.45
PCDHGA1-201ENST00000378105 A0A0D9SG42 100 aa5.99□□□□□ -1.45
PCDHGA1-201ENST00000378105 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
PCDHGA1-201ENST00000378105 KRTAP10-4P60372 401 aaPredicted RBP5.98□□□□□ -1.45
PCDHGA1-201ENST00000378105 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
PCDHGA1-201ENST00000378105 M0R2T5 61 aa5.9□□□□□ -1.46
PCDHGA1-201ENST00000378105 LRP2P98164 4655 aa5.84□□□□□ -1.48
PCDHGA1-201ENST00000378105 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
PCDHGA1-201ENST00000378105 KRTAP13-3Q3SY46 172 aa5.82□□□□□ -1.48
PCDHGA1-201ENST00000378105 RPS29P62273 56 aaKnown RBP5.78□□□□□ -1.48
PCDHGA1-201ENST00000378105 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
PCDHGA1-201ENST00000378105 S4R3F8 94 aa5.73□□□□□ -1.49
PCDHGA1-201ENST00000378105 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
PCDHGA1-201ENST00000378105 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
PCDHGA1-201ENST00000378105 FAT4Q6V0I7 4981 aa5.67□□□□□ -1.5
PCDHGA1-201ENST00000378105 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.51
PCDHGA1-201ENST00000378105 XP32Q5T750 250 aa5.64□□□□□ -1.51
PCDHGA1-201ENST00000378105 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
PCDHGA1-201ENST00000378105 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
PCDHGA1-201ENST00000378105 R4GN34 69 aa5.59□□□□□ -1.51
PCDHGA1-201ENST00000378105 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
PCDHGA1-201ENST00000378105 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
PCDHGA1-201ENST00000378105 M0QZ58 72 aa5.52□□□□□ -1.53
PCDHGA1-201ENST00000378105 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
PCDHGA1-201ENST00000378105 MT1HL1P0DM35 61 aa5.42□□□□□ -1.54
PCDHGA1-201ENST00000378105 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
PCDHGA1-201ENST00000378105 KRTAP19-2Q3LHN2 52 aa5.33□□□□□ -1.56
PCDHGA1-201ENST00000378105 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
PCDHGA1-201ENST00000378105 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
PCDHGA1-201ENST00000378105 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
PCDHGA1-201ENST00000378105 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
PCDHGA1-201ENST00000378105 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
PCDHGA1-201ENST00000378105 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
PCDHGA1-201ENST00000378105 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
PCDHGA1-201ENST00000378105 USH2AO75445 5202 aa5.01□□□□□ -1.61
PCDHGA1-201ENST00000378105 LCE2CQ5TA81 110 aa5□□□□□ -1.61
PCDHGA1-201ENST00000378105 TNP1P09430 55 aa4.95□□□□□ -1.62
PCDHGA1-201ENST00000378105 INE1O15225 51 aa4.87□□□□□ -1.63
PCDHGA1-201ENST00000378105 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
PCDHGA1-201ENST00000378105 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
PCDHGA1-201ENST00000378105 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
PCDHGA1-201ENST00000378105 LORP23490 312 aaPredicted RBP4.72□□□□□ -1.65
PCDHGA1-201ENST00000378105 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
PCDHGA1-201ENST00000378105 KMT2DO14686 5537 aa4.64□□□□□ -1.67
PCDHGA1-201ENST00000378105 MT1HP80294 61 aa4.63□□□□□ -1.67
PCDHGA1-201ENST00000378105 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
PCDHGA1-201ENST00000378105 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
PCDHGA1-201ENST00000378105 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
PCDHGA1-201ENST00000378105 MT2AP02795 61 aa4.51□□□□□ -1.69
PCDHGA1-201ENST00000378105 MT1FP04733 61 aa4.48□□□□□ -1.69
PCDHGA1-201ENST00000378105 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
PCDHGA1-201ENST00000378105 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
PCDHGA1-201ENST00000378105 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
PCDHGA1-201ENST00000378105 LCE2BO14633 110 aa4.29□□□□□ -1.72
PCDHGA1-201ENST00000378105 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
PCDHGA1-201ENST00000378105 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
PCDHGA1-201ENST00000378105 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
PCDHGA1-201ENST00000378105 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
PCDHGA1-201ENST00000378105 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
PCDHGA1-201ENST00000378105 LCE2DQ5TA82 110 aaPredicted RBP4.2□□□□□ -1.74
PCDHGA1-201ENST00000378105 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
PCDHGA1-201ENST00000378105 MT1BP07438 61 aa4.12□□□□□ -1.75
PCDHGA1-201ENST00000378105 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
PCDHGA1-201ENST00000378105 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
PCDHGA1-201ENST00000378105 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
PCDHGA1-201ENST00000378105 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
PCDHGA1-201ENST00000378105 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
PCDHGA1-201ENST00000378105 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
PCDHGA1-201ENST00000378105 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
PCDHGA1-201ENST00000378105 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
PCDHGA1-201ENST00000378105 MT1XP80297 61 aa4.03□□□□□ -1.76
PCDHGA1-201ENST00000378105 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
PCDHGA1-201ENST00000378105 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
PCDHGA1-201ENST00000378105 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
PCDHGA1-201ENST00000378105 KRTAP4-8Q9BYQ9 185 aa3.97□□□□□ -1.77
PCDHGA1-201ENST00000378105 KRTAP9-2Q9BYQ4 174 aa3.96□□□□□ -1.78
PCDHGA1-201ENST00000378105 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms