RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 UQCR11O14957 56 aa4.33□□□□□ -1.72
CKAP2-203ENST00000378037 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
CKAP2-203ENST00000378037 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
CKAP2-203ENST00000378037 XP32Q5T750 250 aa4.31□□□□□ -1.72
CKAP2-203ENST00000378037 K7ERS5 55 aa4.29□□□□□ -1.72
CKAP2-203ENST00000378037 ASB16-AS1Q495Z4 193 aa4.29□□□□□ -1.72
CKAP2-203ENST00000378037 MUC2Q02817 5179 aa4.29□□□□□ -1.72
CKAP2-203ENST00000378037 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
CKAP2-203ENST00000378037 Q75L30 129 aa4.28□□□□□ -1.72
CKAP2-203ENST00000378037 A0A1B0GU33 70 aa4.27□□□□□ -1.73
CKAP2-203ENST00000378037 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
CKAP2-203ENST00000378037 S4R3F8 94 aa4.27□□□□□ -1.73
CKAP2-203ENST00000378037 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
CKAP2-203ENST00000378037 HSPG2P98160 4391 aa4.26□□□□□ -1.73
CKAP2-203ENST00000378037 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
CKAP2-203ENST00000378037 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
CKAP2-203ENST00000378037 LPAP08519 4548 aa4.24□□□□□ -1.73
CKAP2-203ENST00000378037 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
CKAP2-203ENST00000378037 A8MUU9 505 aa4.23□□□□□ -1.73
CKAP2-203ENST00000378037 RPL37P61927 97 aaKnown RBP4.23□□□□□ -1.73
CKAP2-203ENST00000378037 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
CKAP2-203ENST00000378037 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
CKAP2-203ENST00000378037 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
CKAP2-203ENST00000378037 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
CKAP2-203ENST00000378037 HERC1Q15751 4861 aa4.2□□□□□ -1.74
CKAP2-203ENST00000378037 MT1HL1P0DM35 61 aa4.2□□□□□ -1.74
CKAP2-203ENST00000378037 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
CKAP2-203ENST00000378037 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
CKAP2-203ENST00000378037 LCE2BO14633 110 aa4.17□□□□□ -1.74
CKAP2-203ENST00000378037 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
CKAP2-203ENST00000378037 TNXBP22105 4242 aa4.17□□□□□ -1.74
CKAP2-203ENST00000378037 R4GN34 69 aa4.17□□□□□ -1.74
CKAP2-203ENST00000378037 M0QZ58 72 aa4.17□□□□□ -1.74
CKAP2-203ENST00000378037 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
CKAP2-203ENST00000378037 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
CKAP2-203ENST00000378037 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
CKAP2-203ENST00000378037 P0C880 135 aa4.15□□□□□ -1.74
CKAP2-203ENST00000378037 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
CKAP2-203ENST00000378037 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
CKAP2-203ENST00000378037 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
CKAP2-203ENST00000378037 MUC17Q685J3 4493 aa4.1□□□□□ -1.75
CKAP2-203ENST00000378037 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.76
CKAP2-203ENST00000378037 ROMO1P60602 79 aa4.08□□□□□ -1.76
CKAP2-203ENST00000378037 H0YAA0 97 aa4.07□□□□□ -1.76
CKAP2-203ENST00000378037 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
CKAP2-203ENST00000378037 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
CKAP2-203ENST00000378037 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
CKAP2-203ENST00000378037 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.77
CKAP2-203ENST00000378037 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
CKAP2-203ENST00000378037 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
CKAP2-203ENST00000378037 LORP23490 312 aaPredicted RBP3.9□□□□□ -1.79
CKAP2-203ENST00000378037 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
CKAP2-203ENST00000378037 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
CKAP2-203ENST00000378037 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
CKAP2-203ENST00000378037 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
CKAP2-203ENST00000378037 LCE2CQ5TA81 110 aa3.84□□□□□ -1.79
CKAP2-203ENST00000378037 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
CKAP2-203ENST00000378037 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
CKAP2-203ENST00000378037 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
CKAP2-203ENST00000378037 KRTAP12-1P59990 96 aa3.77□□□□□ -1.81
CKAP2-203ENST00000378037 USH2AO75445 5202 aa3.76□□□□□ -1.81
CKAP2-203ENST00000378037 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
CKAP2-203ENST00000378037 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
CKAP2-203ENST00000378037 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
CKAP2-203ENST00000378037 TNP1P09430 55 aa3.63□□□□□ -1.83
CKAP2-203ENST00000378037 MT1HP80294 61 aa3.57□□□□□ -1.84
CKAP2-203ENST00000378037 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
CKAP2-203ENST00000378037 KMT2DO14686 5537 aa3.53□□□□□ -1.84
CKAP2-203ENST00000378037 MT1FP04733 61 aa3.53□□□□□ -1.84
CKAP2-203ENST00000378037 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
CKAP2-203ENST00000378037 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
CKAP2-203ENST00000378037 MT2AP02795 61 aa3.5□□□□□ -1.85
CKAP2-203ENST00000378037 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
CKAP2-203ENST00000378037 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
CKAP2-203ENST00000378037 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
CKAP2-203ENST00000378037 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
CKAP2-203ENST00000378037 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CKAP2-203ENST00000378037 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
CKAP2-203ENST00000378037 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
CKAP2-203ENST00000378037 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
CKAP2-203ENST00000378037 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
CKAP2-203ENST00000378037 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
CKAP2-203ENST00000378037 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
CKAP2-203ENST00000378037 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
CKAP2-203ENST00000378037 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
CKAP2-203ENST00000378037 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
CKAP2-203ENST00000378037 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
CKAP2-203ENST00000378037 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
CKAP2-203ENST00000378037 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CKAP2-203ENST00000378037 KRTAP9-6A0A140TA67 174 aa3.27□□□□□ -1.89
CKAP2-203ENST00000378037 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
CKAP2-203ENST00000378037 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
CKAP2-203ENST00000378037 MT1BP07438 61 aa3.23□□□□□ -1.89
CKAP2-203ENST00000378037 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
CKAP2-203ENST00000378037 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
CKAP2-203ENST00000378037 MT1XP80297 61 aa3.19□□□□□ -1.9
CKAP2-203ENST00000378037 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
CKAP2-203ENST00000378037 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
CKAP2-203ENST00000378037 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
CKAP2-203ENST00000378037 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms