RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 FAM236BA0A1B0GV22 79 aa5.4□□□□□ -1.55
SMARCE1-203ENST00000377808 LCA10Q71F78 164 aa5.38□□□□□ -1.55
SMARCE1-203ENST00000377808 CYP4F30PQ9H0H9 118 aa5.38□□□□□ -1.55
SMARCE1-203ENST00000377808 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-203ENST00000377808 LOC101927531A0A1B0GV80 90 aa5.37□□□□□ -1.55
SMARCE1-203ENST00000377808 A0A1B0GV90 55 aa5.37□□□□□ -1.55
SMARCE1-203ENST00000377808 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
SMARCE1-203ENST00000377808 CSAG1Q6PB30 78 aa5.37□□□□□ -1.55
SMARCE1-203ENST00000377808 A0A087WVE0 104 aa5.35□□□□□ -1.55
SMARCE1-203ENST00000377808 H0Y9P7 68 aa5.35□□□□□ -1.55
SMARCE1-203ENST00000377808 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
SMARCE1-203ENST00000377808 UQCRQO14949 82 aa5.34□□□□□ -1.55
SMARCE1-203ENST00000377808 LINC00643Q86TS7 51 aa5.34□□□□□ -1.55
SMARCE1-203ENST00000377808 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
SMARCE1-203ENST00000377808 ATOX1O00244 68 aa5.32□□□□□ -1.56
SMARCE1-203ENST00000377808 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
SMARCE1-203ENST00000377808 LINC00208Q96KT6 92 aa5.26□□□□□ -1.57
SMARCE1-203ENST00000377808 J3QR89 54 aa5.25□□□□□ -1.57
SMARCE1-203ENST00000377808 MP68P56378 58 aa5.24□□□□□ -1.57
SMARCE1-203ENST00000377808 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
SMARCE1-203ENST00000377808 MACF1Q9UPN3 7388 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-203ENST00000377808 NDUFC1O43677 76 aa5.23□□□□□ -1.57
SMARCE1-203ENST00000377808 KLKP1Q107X0 134 aa5.23□□□□□ -1.57
SMARCE1-203ENST00000377808 Q5VV11 94 aa5.22□□□□□ -1.57
SMARCE1-203ENST00000377808 OCR1Q9BZK8 76 aa5.21□□□□□ -1.58
SMARCE1-203ENST00000377808 SCGB1A1P11684 91 aa5.2□□□□□ -1.58
SMARCE1-203ENST00000377808 A8MUN3 132 aa5.19□□□□□ -1.58
SMARCE1-203ENST00000377808 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-203ENST00000377808 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
SMARCE1-203ENST00000377808 IMUPQ9GZP8 106 aa5.18□□□□□ -1.58
SMARCE1-203ENST00000377808 A6NN06 94 aa5.15□□□□□ -1.59
SMARCE1-203ENST00000377808 MT1BP07438 61 aa5.15□□□□□ -1.59
SMARCE1-203ENST00000377808 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
SMARCE1-203ENST00000377808 H3BPC8 53 aa5.13□□□□□ -1.59
SMARCE1-203ENST00000377808 CRIPTQ9P021 101 aa5.13□□□□□ -1.59
SMARCE1-203ENST00000377808 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
SMARCE1-203ENST00000377808 H0YAA0 97 aa5.1□□□□□ -1.59
SMARCE1-203ENST00000377808 MT-ATP8P03928 68 aa5.06□□□□□ -1.6
SMARCE1-203ENST00000377808 K7ERU9 68 aa5.05□□□□□ -1.6
SMARCE1-203ENST00000377808 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
SMARCE1-203ENST00000377808 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
SMARCE1-203ENST00000377808 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
SMARCE1-203ENST00000377808 TRAV7A0A075B6U4 112 aa4.99□□□□□ -1.61
SMARCE1-203ENST00000377808 C20orf197Q8N268 126 aa4.99□□□□□ -1.61
SMARCE1-203ENST00000377808 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
SMARCE1-203ENST00000377808 R4GN34 69 aa4.99□□□□□ -1.61
SMARCE1-203ENST00000377808 P0C880 135 aa4.97□□□□□ -1.61
SMARCE1-203ENST00000377808 ACYP2P14621 99 aa4.97□□□□□ -1.61
SMARCE1-203ENST00000377808 M0QZ58 72 aa4.96□□□□□ -1.62
SMARCE1-203ENST00000377808 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
SMARCE1-203ENST00000377808 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
SMARCE1-203ENST00000377808 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
SMARCE1-203ENST00000377808 LINC01554Q52M75 96 aa4.92□□□□□ -1.62
SMARCE1-203ENST00000377808 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
SMARCE1-203ENST00000377808 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
SMARCE1-203ENST00000377808 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
SMARCE1-203ENST00000377808 MT1XP80297 61 aa4.85□□□□□ -1.63
SMARCE1-203ENST00000377808 SERP2Q8N6R1 65 aa4.83□□□□□ -1.64
SMARCE1-203ENST00000377808 NEBP20929 6669 aa4.83□□□□□ -1.64
SMARCE1-203ENST00000377808 KMT2DO14686 5537 aa4.82□□□□□ -1.64
SMARCE1-203ENST00000377808 SPANXA2-OT1Q8N9U9 137 aa4.8□□□□□ -1.64
SMARCE1-203ENST00000377808 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
SMARCE1-203ENST00000377808 KRTAP5-9P26371 169 aa4.79□□□□□ -1.64
SMARCE1-203ENST00000377808 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
SMARCE1-203ENST00000377808 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
SMARCE1-203ENST00000377808 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
SMARCE1-203ENST00000377808 COA5Q86WW8 74 aa4.72□□□□□ -1.65
SMARCE1-203ENST00000377808 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
SMARCE1-203ENST00000377808 COX7CP15954 63 aa4.7□□□□□ -1.66
SMARCE1-203ENST00000377808 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
SMARCE1-203ENST00000377808 SPRR2EP22531 72 aa4.67□□□□□ -1.66
SMARCE1-203ENST00000377808 SPRR2BP35325 72 aa4.67□□□□□ -1.66
SMARCE1-203ENST00000377808 SPRR2AP35326 72 aa4.67□□□□□ -1.66
SMARCE1-203ENST00000377808 SEC61GP60059 68 aa4.66□□□□□ -1.66
SMARCE1-203ENST00000377808 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
SMARCE1-203ENST00000377808 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-203ENST00000377808 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
SMARCE1-203ENST00000377808 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
SMARCE1-203ENST00000377808 CYSTM1Q9H1C7 97 aa4.61□□□□□ -1.67
SMARCE1-203ENST00000377808 H7BZZ5 65 aa4.6□□□□□ -1.67
SMARCE1-203ENST00000377808 A0A0D9SG42 100 aa4.59□□□□□ -1.67
SMARCE1-203ENST00000377808 KRTAP10-12P60413 245 aa4.59□□□□□ -1.67
SMARCE1-203ENST00000377808 ANAPC13Q9BS18 74 aa4.57□□□□□ -1.68
SMARCE1-203ENST00000377808 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
SMARCE1-203ENST00000377808 SPATA8Q6RVD6 105 aa4.55□□□□□ -1.68
SMARCE1-203ENST00000377808 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
SMARCE1-203ENST00000377808 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
SMARCE1-203ENST00000377808 A0A1B0GU33 70 aa4.53□□□□□ -1.68
SMARCE1-203ENST00000377808 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
SMARCE1-203ENST00000377808 SPRR2DP22532 72 aa4.5□□□□□ -1.69
SMARCE1-203ENST00000377808 A0A1B0GU69 56 aa4.49□□□□□ -1.69
SMARCE1-203ENST00000377808 PCP4P48539 62 aa4.49□□□□□ -1.69
SMARCE1-203ENST00000377808 CCDC179H3BU77 68 aa4.46□□□□□ -1.69
SMARCE1-203ENST00000377808 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
SMARCE1-203ENST00000377808 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
SMARCE1-203ENST00000377808 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
SMARCE1-203ENST00000377808 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
SMARCE1-203ENST00000377808 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
SMARCE1-203ENST00000377808 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
SMARCE1-203ENST00000377808 A8MU10 97 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms