RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
UBA1-202ENST00000377269 KRTAP25-1Q3LHN0 102 aa8.14□□□□□ -1.11
UBA1-202ENST00000377269 KRTAP16-1A8MUX0 517 aa8.13□□□□□ -1.11
UBA1-202ENST00000377269 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
UBA1-202ENST00000377269 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
UBA1-202ENST00000377269 A8MUU9 505 aa8.13□□□□□ -1.11
UBA1-202ENST00000377269 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
UBA1-202ENST00000377269 ROMO1P60602 79 aa8.1□□□□□ -1.11
UBA1-202ENST00000377269 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
UBA1-202ENST00000377269 SPINK1P00995 79 aa8.08□□□□□ -1.12
UBA1-202ENST00000377269 H0YAA0 97 aa8.06□□□□□ -1.12
UBA1-202ENST00000377269 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
UBA1-202ENST00000377269 A0A1B0GU33 70 aa7.93□□□□□ -1.14
UBA1-202ENST00000377269 HERC1Q15751 4861 aa7.9□□□□□ -1.14
UBA1-202ENST00000377269 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
UBA1-202ENST00000377269 P0C880 135 aa7.88□□□□□ -1.15
UBA1-202ENST00000377269 C9orf92A6NGG3 77 aa7.82□□□□□ -1.16
UBA1-202ENST00000377269 LPAP08519 4548 aa7.81□□□□□ -1.16
UBA1-202ENST00000377269 K7ERS5 55 aa7.8□□□□□ -1.16
UBA1-202ENST00000377269 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
UBA1-202ENST00000377269 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
UBA1-202ENST00000377269 LRP2P98164 4655 aa7.72□□□□□ -1.17
UBA1-202ENST00000377269 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.18
UBA1-202ENST00000377269 HMCN2Q8NDA2 5059 aa7.69□□□□□ -1.18
UBA1-202ENST00000377269 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
UBA1-202ENST00000377269 XP32Q5T750 250 aa7.64□□□□□ -1.19
UBA1-202ENST00000377269 TPRXLQ17RH7 258 aa7.63□□□□□ -1.19
UBA1-202ENST00000377269 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
UBA1-202ENST00000377269 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
UBA1-202ENST00000377269 RPL37P61927 97 aaKnown RBP7.6□□□□□ -1.19
UBA1-202ENST00000377269 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
UBA1-202ENST00000377269 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
UBA1-202ENST00000377269 KRTAP10-6P60371 365 aaPredicted RBP7.51□□□□□ -1.21
UBA1-202ENST00000377269 KRTAP13-4Q3LI77 160 aa7.49□□□□□ -1.21
UBA1-202ENST00000377269 MUC2Q02817 5179 aa7.47□□□□□ -1.21
UBA1-202ENST00000377269 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
UBA1-202ENST00000377269 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
UBA1-202ENST00000377269 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
UBA1-202ENST00000377269 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
UBA1-202ENST00000377269 A0A0D9SG42 100 aa7.43□□□□□ -1.22
UBA1-202ENST00000377269 MUC17Q685J3 4493 aa7.35□□□□□ -1.23
UBA1-202ENST00000377269 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
UBA1-202ENST00000377269 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
UBA1-202ENST00000377269 S4R3F8 94 aa7.34□□□□□ -1.23
UBA1-202ENST00000377269 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
UBA1-202ENST00000377269 KRTAP12-1P59990 96 aa7.22□□□□□ -1.25
UBA1-202ENST00000377269 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
UBA1-202ENST00000377269 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
UBA1-202ENST00000377269 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
UBA1-202ENST00000377269 M0QZ58 72 aa7.05□□□□□ -1.28
UBA1-202ENST00000377269 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
UBA1-202ENST00000377269 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
UBA1-202ENST00000377269 LUZP6Q538Z0 58 aa6.98□□□□□ -1.29
UBA1-202ENST00000377269 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.29
UBA1-202ENST00000377269 PLAC4Q8WY50 150 aa6.96□□□□□ -1.3
UBA1-202ENST00000377269 MT1HP80294 61 aa6.84□□□□□ -1.32
UBA1-202ENST00000377269 M0R2T5 61 aa6.76□□□□□ -1.33
UBA1-202ENST00000377269 R4GN34 69 aa6.72□□□□□ -1.33
UBA1-202ENST00000377269 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
UBA1-202ENST00000377269 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
UBA1-202ENST00000377269 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
UBA1-202ENST00000377269 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
UBA1-202ENST00000377269 MT2AP02795 61 aa6.53□□□□□ -1.36
UBA1-202ENST00000377269 MT1FP04733 61 aa6.51□□□□□ -1.37
UBA1-202ENST00000377269 LCE2BO14633 110 aa6.48□□□□□ -1.37
UBA1-202ENST00000377269 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
UBA1-202ENST00000377269 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
UBA1-202ENST00000377269 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
UBA1-202ENST00000377269 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.4
UBA1-202ENST00000377269 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
UBA1-202ENST00000377269 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
UBA1-202ENST00000377269 TNP1P09430 55 aa6.28□□□□□ -1.4
UBA1-202ENST00000377269 USH2AO75445 5202 aa6.25□□□□□ -1.41
UBA1-202ENST00000377269 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
UBA1-202ENST00000377269 FSIP2Q5CZC0 6907 aa6.17□□□□□ -1.42
UBA1-202ENST00000377269 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
UBA1-202ENST00000377269 MT1BP07438 61 aa6.12□□□□□ -1.43
UBA1-202ENST00000377269 INE1O15225 51 aa6.07□□□□□ -1.44
UBA1-202ENST00000377269 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
UBA1-202ENST00000377269 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.46
UBA1-202ENST00000377269 MT1XP80297 61 aa5.89□□□□□ -1.47
UBA1-202ENST00000377269 LCE3AQ5TA76 89 aa5.88□□□□□ -1.47
UBA1-202ENST00000377269 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
UBA1-202ENST00000377269 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
UBA1-202ENST00000377269 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
UBA1-202ENST00000377269 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
UBA1-202ENST00000377269 CRCT1Q9UGL9 99 aa5.71□□□□□ -1.5
UBA1-202ENST00000377269 KMT2DO14686 5537 aa5.7□□□□□ -1.5
UBA1-202ENST00000377269 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
UBA1-202ENST00000377269 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
UBA1-202ENST00000377269 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
UBA1-202ENST00000377269 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
UBA1-202ENST00000377269 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
UBA1-202ENST00000377269 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
UBA1-202ENST00000377269 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
UBA1-202ENST00000377269 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
UBA1-202ENST00000377269 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
UBA1-202ENST00000377269 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
UBA1-202ENST00000377269 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
UBA1-202ENST00000377269 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms