RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 LCA10Q71F78 164 aa8.96□□□□□ -0.97
NKX2-2-201ENST00000377142 BIRC6Q9NR09 4857 aa8.96□□□□□ -0.97
NKX2-2-201ENST00000377142 ABCA13Q86UQ4 5058 aa8.96□□□□□ -0.98
NKX2-2-201ENST00000377142 PMAIP1Q13794 54 aa8.96□□□□□ -0.98
NKX2-2-201ENST00000377142 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
NKX2-2-201ENST00000377142 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
NKX2-2-201ENST00000377142 A8MU10 97 aa8.95□□□□□ -0.98
NKX2-2-201ENST00000377142 HERC2O95714 4834 aa8.94□□□□□ -0.98
NKX2-2-201ENST00000377142 LRP2P98164 4655 aa8.89□□□□□ -0.99
NKX2-2-201ENST00000377142 UQCR11O14957 56 aa8.88□□□□□ -0.99
NKX2-2-201ENST00000377142 LPAP08519 4548 aa8.86□□□□□ -0.99
NKX2-2-201ENST00000377142 S4R3F8 94 aa8.85□□□□□ -0.99
NKX2-2-201ENST00000377142 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
NKX2-2-201ENST00000377142 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
NKX2-2-201ENST00000377142 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
NKX2-2-201ENST00000377142 MIR22HGQ0VDD5 57 aa8.8□□□□□ -1
NKX2-2-201ENST00000377142 A0A1B0GU33 70 aa8.71□□□□□ -1.02
NKX2-2-201ENST00000377142 A6NN06 94 aa8.64□□□□□ -1.03
NKX2-2-201ENST00000377142 H0YAA0 97 aa8.63□□□□□ -1.03
NKX2-2-201ENST00000377142 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
NKX2-2-201ENST00000377142 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
NKX2-2-201ENST00000377142 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
NKX2-2-201ENST00000377142 MUC17Q685J3 4493 aa8.59□□□□□ -1.03
NKX2-2-201ENST00000377142 LCE2DQ5TA82 110 aaPredicted RBP8.55□□□□□ -1.04
NKX2-2-201ENST00000377142 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
NKX2-2-201ENST00000377142 PCLOQ9Y6V0 5065 aa8.49□□□□□ -1.05
NKX2-2-201ENST00000377142 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
NKX2-2-201ENST00000377142 P0C880 135 aa8.48□□□□□ -1.05
NKX2-2-201ENST00000377142 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
NKX2-2-201ENST00000377142 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
NKX2-2-201ENST00000377142 KRTAP23-1A1A580 65 aa8.4□□□□□ -1.06
NKX2-2-201ENST00000377142 HERC1Q15751 4861 aa8.4□□□□□ -1.06
NKX2-2-201ENST00000377142 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
NKX2-2-201ENST00000377142 K7ERS5 55 aa8.36□□□□□ -1.07
NKX2-2-201ENST00000377142 M0QZ58 72 aa8.31□□□□□ -1.08
NKX2-2-201ENST00000377142 A0A0D9SG42 100 aa8.3□□□□□ -1.08
NKX2-2-201ENST00000377142 PRAC1Q96KF2 57 aa8.21□□□□□ -1.1
NKX2-2-201ENST00000377142 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
NKX2-2-201ENST00000377142 MUC2Q02817 5179 aa8.18□□□□□ -1.1
NKX2-2-201ENST00000377142 R4GN34 69 aa8.17□□□□□ -1.1
NKX2-2-201ENST00000377142 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
NKX2-2-201ENST00000377142 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
NKX2-2-201ENST00000377142 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
NKX2-2-201ENST00000377142 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
NKX2-2-201ENST00000377142 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
NKX2-2-201ENST00000377142 ROMO1P60602 79 aa8.06□□□□□ -1.12
NKX2-2-201ENST00000377142 LINC01554Q52M75 96 aa8.03□□□□□ -1.12
NKX2-2-201ENST00000377142 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
NKX2-2-201ENST00000377142 RNF213Q63HN8 5207 aa7.94□□□□□ -1.14
NKX2-2-201ENST00000377142 MT1HP80294 61 aa7.94□□□□□ -1.14
NKX2-2-201ENST00000377142 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
NKX2-2-201ENST00000377142 M0R2T5 61 aa7.91□□□□□ -1.14
NKX2-2-201ENST00000377142 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
NKX2-2-201ENST00000377142 KRTAP25-1Q3LHN0 102 aa7.89□□□□□ -1.15
NKX2-2-201ENST00000377142 FAT4Q6V0I7 4981 aa7.84□□□□□ -1.15
NKX2-2-201ENST00000377142 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
NKX2-2-201ENST00000377142 MT2AP02795 61 aa7.71□□□□□ -1.18
NKX2-2-201ENST00000377142 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
NKX2-2-201ENST00000377142 LUZP6Q538Z0 58 aa7.69□□□□□ -1.18
NKX2-2-201ENST00000377142 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
NKX2-2-201ENST00000377142 LCE2BO14633 110 aa7.67□□□□□ -1.18
NKX2-2-201ENST00000377142 MT1FP04733 61 aa7.67□□□□□ -1.18
NKX2-2-201ENST00000377142 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
NKX2-2-201ENST00000377142 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
NKX2-2-201ENST00000377142 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
NKX2-2-201ENST00000377142 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
NKX2-2-201ENST00000377142 KRTAP19-8Q3LI54 63 aa7.47□□□□□ -1.21
NKX2-2-201ENST00000377142 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
NKX2-2-201ENST00000377142 TNP1P09430 55 aa7.38□□□□□ -1.23
NKX2-2-201ENST00000377142 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
NKX2-2-201ENST00000377142 MT1BP07438 61 aa7.34□□□□□ -1.23
NKX2-2-201ENST00000377142 MT1XP80297 61 aa7.17□□□□□ -1.26
NKX2-2-201ENST00000377142 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
NKX2-2-201ENST00000377142 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
NKX2-2-201ENST00000377142 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
NKX2-2-201ENST00000377142 LCE3AQ5TA76 89 aa7□□□□□ -1.29
NKX2-2-201ENST00000377142 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
NKX2-2-201ENST00000377142 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
NKX2-2-201ENST00000377142 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
NKX2-2-201ENST00000377142 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
NKX2-2-201ENST00000377142 USH2AO75445 5202 aa6.78□□□□□ -1.32
NKX2-2-201ENST00000377142 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
NKX2-2-201ENST00000377142 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
NKX2-2-201ENST00000377142 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
NKX2-2-201ENST00000377142 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
NKX2-2-201ENST00000377142 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
NKX2-2-201ENST00000377142 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
NKX2-2-201ENST00000377142 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
NKX2-2-201ENST00000377142 KMT2DO14686 5537 aa6.41□□□□□ -1.38
NKX2-2-201ENST00000377142 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
NKX2-2-201ENST00000377142 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
NKX2-2-201ENST00000377142 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
NKX2-2-201ENST00000377142 MT1EP04732 61 aa6.26□□□□□ -1.41
NKX2-2-201ENST00000377142 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
NKX2-2-201ENST00000377142 MT1LQ93083 61 aa6.19□□□□□ -1.42
NKX2-2-201ENST00000377142 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
NKX2-2-201ENST00000377142 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
NKX2-2-201ENST00000377142 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
NKX2-2-201ENST00000377142 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
NKX2-2-201ENST00000377142 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms