RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 NDUFC1O43677 76 aa10.13□□□□□ -0.79
SRM-201ENST00000376957 KRTAP19-6Q3LI70 58 aa10.11□□□□□ -0.79
SRM-201ENST00000376957 H3BPC8 53 aa10.1□□□□□ -0.79
SRM-201ENST00000376957 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
SRM-201ENST00000376957 IMUPQ9GZP8 106 aa10.07□□□□□ -0.8
SRM-201ENST00000376957 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
SRM-201ENST00000376957 FCGBPQ9Y6R7 5405 aaPredicted RBP10.04□□□□□ -0.8
SRM-201ENST00000376957 K7ERU9 68 aa10.02□□□□□ -0.81
SRM-201ENST00000376957 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
SRM-201ENST00000376957 Q5VV11 94 aa9.98□□□□□ -0.81
SRM-201ENST00000376957 SPRR2GQ9BYE4 73 aa9.98□□□□□ -0.81
SRM-201ENST00000376957 H0YAA0 97 aa9.95□□□□□ -0.82
SRM-201ENST00000376957 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
SRM-201ENST00000376957 KRTAP19-8Q3LI54 63 aa9.87□□□□□ -0.83
SRM-201ENST00000376957 MT-ATP8P03928 68 aa9.85□□□□□ -0.83
SRM-201ENST00000376957 DMAC1Q96GE9 116 aa9.83□□□□□ -0.84
SRM-201ENST00000376957 ADM2Q7Z4H4 148 aa9.82□□□□□ -0.84
SRM-201ENST00000376957 MACF1Q9UPN3 7388 aaKnown RBP9.81□□□□□ -0.84
SRM-201ENST00000376957 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
SRM-201ENST00000376957 A6NN06 94 aa9.8□□□□□ -0.84
SRM-201ENST00000376957 MT1BP07438 61 aa9.8□□□□□ -0.84
SRM-201ENST00000376957 C20orf197Q8N268 126 aa9.76□□□□□ -0.85
SRM-201ENST00000376957 SYNE2Q8WXH0 6885 aaKnown RBP9.75□□□□□ -0.85
SRM-201ENST00000376957 ACYP2P14621 99 aa9.72□□□□□ -0.85
SRM-201ENST00000376957 SPTSSBQ8NFR3 76 aa9.66□□□□□ -0.86
SRM-201ENST00000376957 R4GN34 69 aa9.64□□□□□ -0.87
SRM-201ENST00000376957 KRTAP10-5P60370 271 aa9.62□□□□□ -0.87
SRM-201ENST00000376957 CHKB-CPT1BH3BT56 60 aa9.57□□□□□ -0.88
SRM-201ENST00000376957 KRTAP6-3Q3LI67 103 aa9.55□□□□□ -0.88
SRM-201ENST00000376957 PLAC4Q8WY50 150 aa9.54□□□□□ -0.88
SRM-201ENST00000376957 SNURFQ9Y675 71 aa9.54□□□□□ -0.88
SRM-201ENST00000376957 P0C880 135 aa9.53□□□□□ -0.88
SRM-201ENST00000376957 M0QZ58 72 aa9.52□□□□□ -0.89
SRM-201ENST00000376957 SERP2Q8N6R1 65 aa9.52□□□□□ -0.89
SRM-201ENST00000376957 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
SRM-201ENST00000376957 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
SRM-201ENST00000376957 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
SRM-201ENST00000376957 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
SRM-201ENST00000376957 COX7CP15954 63 aa9.25□□□□□ -0.93
SRM-201ENST00000376957 MT1XP80297 61 aa9.24□□□□□ -0.93
SRM-201ENST00000376957 NEBP20929 6669 aa9.2□□□□□ -0.94
SRM-201ENST00000376957 COA5Q86WW8 74 aa9.16□□□□□ -0.94
SRM-201ENST00000376957 KRTAP5-9P26371 169 aa9.14□□□□□ -0.95
SRM-201ENST00000376957 SEC61GP60059 68 aa9.14□□□□□ -0.95
SRM-201ENST00000376957 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
SRM-201ENST00000376957 KRTAP12-2P59991 146 aa9.07□□□□□ -0.96
SRM-201ENST00000376957 H7BZZ5 65 aa9.03□□□□□ -0.96
SRM-201ENST00000376957 ANAPC13Q9BS18 74 aa9.02□□□□□ -0.97
SRM-201ENST00000376957 MUC12Q9UKN1 5478 aa9□□□□□ -0.97
SRM-201ENST00000376957 KRTAP8-1Q8IUC2 63 aa9□□□□□ -0.97
SRM-201ENST00000376957 SPRR2FQ96RM1 72 aa8.95□□□□□ -0.98
SRM-201ENST00000376957 CYSTM1Q9H1C7 97 aa8.92□□□□□ -0.98
SRM-201ENST00000376957 KRTAP20-1Q3LI63 56 aa8.91□□□□□ -0.98
SRM-201ENST00000376957 CAMK2N1Q7Z7J9 78 aa8.91□□□□□ -0.98
SRM-201ENST00000376957 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.98
SRM-201ENST00000376957 KMT2DO14686 5537 aa8.88□□□□□ -0.99
SRM-201ENST00000376957 A0A1B0GU33 70 aa8.85□□□□□ -0.99
SRM-201ENST00000376957 KRTAP10-7P60409 375 aaPredicted RBP8.81□□□□□ -1
SRM-201ENST00000376957 KRTAP10-12P60413 245 aa8.81□□□□□ -1
SRM-201ENST00000376957 SPRR2EP22531 72 aa8.79□□□□□ -1
SRM-201ENST00000376957 SPRR2BP35325 72 aa8.79□□□□□ -1
SRM-201ENST00000376957 SPRR2AP35326 72 aa8.79□□□□□ -1
SRM-201ENST00000376957 A0A0D9SG42 100 aa8.78□□□□□ -1
SRM-201ENST00000376957 A0A1B0GU69 56 aa8.78□□□□□ -1
SRM-201ENST00000376957 KRTAP4-8A0A0G2JLE6 195 aa8.77□□□□□ -1.01
SRM-201ENST00000376957 KRTAP4-8Q9BYQ9 185 aa8.77□□□□□ -1.01
SRM-201ENST00000376957 MDN1Q9NU22 5596 aa8.76□□□□□ -1.01
SRM-201ENST00000376957 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
SRM-201ENST00000376957 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
SRM-201ENST00000376957 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
SRM-201ENST00000376957 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
SRM-201ENST00000376957 SMIM26A0A096LP01 95 aa8.65□□□□□ -1.02
SRM-201ENST00000376957 KRTAP2-3P0C7H8 128 aa8.63□□□□□ -1.03
SRM-201ENST00000376957 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
SRM-201ENST00000376957 KRTAP2-4Q9BYR9 128 aa8.63□□□□□ -1.03
SRM-201ENST00000376957 LCE1AQ5T7P2 110 aa8.62□□□□□ -1.03
SRM-201ENST00000376957 KRTAP12-1P59990 96 aa8.54□□□□□ -1.04
SRM-201ENST00000376957 SPRR2DP22532 72 aa8.51□□□□□ -1.05
SRM-201ENST00000376957 TMEM258P61165 79 aa8.51□□□□□ -1.05
SRM-201ENST00000376957 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
SRM-201ENST00000376957 A8MU10 97 aa8.41□□□□□ -1.06
SRM-201ENST00000376957 KRTAP2-2Q9BYT5 123 aa8.37□□□□□ -1.07
SRM-201ENST00000376957 KRTAP2-1Q9BYU5 128 aa8.37□□□□□ -1.07
SRM-201ENST00000376957 UQCR11O14957 56 aa8.29□□□□□ -1.08
SRM-201ENST00000376957 LCE3BQ5TA77 95 aa8.25□□□□□ -1.09
SRM-201ENST00000376957 TNP1P09430 55 aa8.24□□□□□ -1.09
SRM-201ENST00000376957 KRTAP19-7Q3SYF9 63 aa8.24□□□□□ -1.09
SRM-201ENST00000376957 MT1EP04732 61 aa8.19□□□□□ -1.1
SRM-201ENST00000376957 KRTAP19-3Q7Z4W3 81 aa8.14□□□□□ -1.11
SRM-201ENST00000376957 V9GYY9 64 aa8.14□□□□□ -1.11
SRM-201ENST00000376957 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
SRM-201ENST00000376957 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
SRM-201ENST00000376957 LCE5AQ5TCM9 118 aa8.12□□□□□ -1.11
SRM-201ENST00000376957 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
SRM-201ENST00000376957 K7ERS5 55 aa8.05□□□□□ -1.12
SRM-201ENST00000376957 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
SRM-201ENST00000376957 MT1GP13640 62 aa8.01□□□□□ -1.13
SRM-201ENST00000376957 LCE3AQ5TA76 89 aa8□□□□□ -1.13
SRM-201ENST00000376957 Q1T7F1 81 aa7.97□□□□□ -1.13
SRM-201ENST00000376957 PSPHP1O15172 72 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms