RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 KRTAP10-8P60410 259 aa6.1□□□□□ -1.43
DDR1-227ENST00000376570 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
DDR1-227ENST00000376570 KRTAP4-5Q9BYR2 181 aa6.1□□□□□ -1.43
DDR1-227ENST00000376570 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
DDR1-227ENST00000376570 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
DDR1-227ENST00000376570 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
DDR1-227ENST00000376570 APOBP04114 4563 aaKnown RBP6.09□□□□□ -1.43
DDR1-227ENST00000376570 FAT2Q9NYQ8 4349 aa6.09□□□□□ -1.44
DDR1-227ENST00000376570 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
DDR1-227ENST00000376570 C10orf95Q9H7T3 257 aa6.06□□□□□ -1.44
DDR1-227ENST00000376570 RYR3Q15413 4870 aa6.05□□□□□ -1.44
DDR1-227ENST00000376570 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
DDR1-227ENST00000376570 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
DDR1-227ENST00000376570 P0C880 135 aa6.02□□□□□ -1.45
DDR1-227ENST00000376570 ROMO1P60602 79 aa6.02□□□□□ -1.45
DDR1-227ENST00000376570 KRTAP17-1Q9BYP8 105 aa6□□□□□ -1.45
DDR1-227ENST00000376570 M0QZ58 72 aa5.99□□□□□ -1.45
DDR1-227ENST00000376570 R4GN34 69 aa5.97□□□□□ -1.45
DDR1-227ENST00000376570 M0R2T5 61 aa5.97□□□□□ -1.45
DDR1-227ENST00000376570 RYR2Q92736 4967 aa5.95□□□□□ -1.46
DDR1-227ENST00000376570 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
DDR1-227ENST00000376570 PKD1P98161 4303 aa5.92□□□□□ -1.46
DDR1-227ENST00000376570 MT1HL1P0DM35 61 aa5.89□□□□□ -1.47
DDR1-227ENST00000376570 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
DDR1-227ENST00000376570 LRP2P98164 4655 aa5.88□□□□□ -1.47
DDR1-227ENST00000376570 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
DDR1-227ENST00000376570 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
DDR1-227ENST00000376570 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
DDR1-227ENST00000376570 LPAP08519 4548 aa5.78□□□□□ -1.48
DDR1-227ENST00000376570 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
DDR1-227ENST00000376570 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
DDR1-227ENST00000376570 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
DDR1-227ENST00000376570 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
DDR1-227ENST00000376570 HSPG2P98160 4391 aa5.73□□□□□ -1.49
DDR1-227ENST00000376570 MUC2Q02817 5179 aa5.67□□□□□ -1.5
DDR1-227ENST00000376570 HERC2O95714 4834 aa5.65□□□□□ -1.51
DDR1-227ENST00000376570 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
DDR1-227ENST00000376570 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
DDR1-227ENST00000376570 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
DDR1-227ENST00000376570 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
DDR1-227ENST00000376570 LUZP6Q538Z0 58 aa5.59□□□□□ -1.52
DDR1-227ENST00000376570 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.52
DDR1-227ENST00000376570 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
DDR1-227ENST00000376570 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
DDR1-227ENST00000376570 HERC1Q15751 4861 aa5.48□□□□□ -1.53
DDR1-227ENST00000376570 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
DDR1-227ENST00000376570 KRTAP10-10P60014 251 aa5.45□□□□□ -1.54
DDR1-227ENST00000376570 TNXBP22105 4242 aa5.44□□□□□ -1.54
DDR1-227ENST00000376570 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
DDR1-227ENST00000376570 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.54
DDR1-227ENST00000376570 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
DDR1-227ENST00000376570 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.56
DDR1-227ENST00000376570 UBR4Q5T4S7 5183 aa5.3□□□□□ -1.56
DDR1-227ENST00000376570 TNP1P09430 55 aa5.27□□□□□ -1.57
DDR1-227ENST00000376570 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
DDR1-227ENST00000376570 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
DDR1-227ENST00000376570 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.6
DDR1-227ENST00000376570 MT1HP80294 61 aa5□□□□□ -1.61
DDR1-227ENST00000376570 MT1FP04733 61 aa4.97□□□□□ -1.61
DDR1-227ENST00000376570 MT2AP02795 61 aa4.93□□□□□ -1.62
DDR1-227ENST00000376570 USH2AO75445 5202 aa4.92□□□□□ -1.62
DDR1-227ENST00000376570 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
DDR1-227ENST00000376570 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
DDR1-227ENST00000376570 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
DDR1-227ENST00000376570 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
DDR1-227ENST00000376570 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
DDR1-227ENST00000376570 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
DDR1-227ENST00000376570 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
DDR1-227ENST00000376570 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
DDR1-227ENST00000376570 KMT2DO14686 5537 aa4.74□□□□□ -1.65
DDR1-227ENST00000376570 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
DDR1-227ENST00000376570 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
DDR1-227ENST00000376570 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.65
DDR1-227ENST00000376570 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
DDR1-227ENST00000376570 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
DDR1-227ENST00000376570 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
DDR1-227ENST00000376570 MT1BP07438 61 aa4.6□□□□□ -1.67
DDR1-227ENST00000376570 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
DDR1-227ENST00000376570 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
DDR1-227ENST00000376570 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
DDR1-227ENST00000376570 MT1XP80297 61 aa4.57□□□□□ -1.68
DDR1-227ENST00000376570 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
DDR1-227ENST00000376570 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
DDR1-227ENST00000376570 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
DDR1-227ENST00000376570 LCE2BO14633 110 aa4.5□□□□□ -1.69
DDR1-227ENST00000376570 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
DDR1-227ENST00000376570 KRTAP19-5Q3LI72 72 aa4.49□□□□□ -1.69
DDR1-227ENST00000376570 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
DDR1-227ENST00000376570 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
DDR1-227ENST00000376570 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
DDR1-227ENST00000376570 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
DDR1-227ENST00000376570 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
DDR1-227ENST00000376570 INE1O15225 51 aa4.32□□□□□ -1.72
DDR1-227ENST00000376570 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
DDR1-227ENST00000376570 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
DDR1-227ENST00000376570 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
DDR1-227ENST00000376570 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
DDR1-227ENST00000376570 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
DDR1-227ENST00000376570 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
DDR1-227ENST00000376570 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms