RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CYP4F30PQ9H0H9 118 aa6.43□□□□□ -1.38
CLCN6-204ENST00000376491 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
CLCN6-204ENST00000376491 KRTAP2-3P0C7H8 128 aa6.37□□□□□ -1.39
CLCN6-204ENST00000376491 KRTAP2-4Q9BYR9 128 aa6.37□□□□□ -1.39
CLCN6-204ENST00000376491 A0A1B0GV90 55 aa6.33□□□□□ -1.4
CLCN6-204ENST00000376491 K7EP34 96 aa6.33□□□□□ -1.4
CLCN6-204ENST00000376491 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
CLCN6-204ENST00000376491 H0YAA0 97 aa6.32□□□□□ -1.4
CLCN6-204ENST00000376491 TRAV22A0A0B4J277 110 aa6.31□□□□□ -1.4
CLCN6-204ENST00000376491 LOC101927531A0A1B0GV80 90 aa6.31□□□□□ -1.4
CLCN6-204ENST00000376491 SPRR2EP22531 72 aa6.3□□□□□ -1.4
CLCN6-204ENST00000376491 SPRR2BP35325 72 aa6.3□□□□□ -1.4
CLCN6-204ENST00000376491 SPRR2AP35326 72 aa6.3□□□□□ -1.4
CLCN6-204ENST00000376491 SEC61GP60059 68 aa6.3□□□□□ -1.4
CLCN6-204ENST00000376491 MT1XP80297 61 aa6.3□□□□□ -1.4
CLCN6-204ENST00000376491 NDUFC1O43677 76 aa6.28□□□□□ -1.4
CLCN6-204ENST00000376491 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
CLCN6-204ENST00000376491 COL5A1-AS1Q5SY13 56 aa6.28□□□□□ -1.4
CLCN6-204ENST00000376491 A8MUN3 132 aa6.25□□□□□ -1.41
CLCN6-204ENST00000376491 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
CLCN6-204ENST00000376491 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
CLCN6-204ENST00000376491 ETDBQ3ZM63 59 aa6.23□□□□□ -1.41
CLCN6-204ENST00000376491 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
CLCN6-204ENST00000376491 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.42
CLCN6-204ENST00000376491 F8W1H4 67 aa6.19□□□□□ -1.42
CLCN6-204ENST00000376491 H0Y9P7 68 aa6.19□□□□□ -1.42
CLCN6-204ENST00000376491 UQCRQO14949 82 aa6.18□□□□□ -1.42
CLCN6-204ENST00000376491 GTF2H5Q6ZYL4 71 aa6.18□□□□□ -1.42
CLCN6-204ENST00000376491 ACYP1P07311 99 aa6.17□□□□□ -1.42
CLCN6-204ENST00000376491 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
CLCN6-204ENST00000376491 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
CLCN6-204ENST00000376491 KRTAP2-2Q9BYT5 123 aa6.16□□□□□ -1.42
CLCN6-204ENST00000376491 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
CLCN6-204ENST00000376491 ATOX1O00244 68 aa6.15□□□□□ -1.42
CLCN6-204ENST00000376491 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
CLCN6-204ENST00000376491 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
CLCN6-204ENST00000376491 HIST1H4AP62805 103 aaKnown RBP6.12□□□□□ -1.43
CLCN6-204ENST00000376491 P0C880 135 aa6.1□□□□□ -1.43
CLCN6-204ENST00000376491 SPRR2DP22532 72 aa6.09□□□□□ -1.43
CLCN6-204ENST00000376491 R4GN34 69 aa6.09□□□□□ -1.43
CLCN6-204ENST00000376491 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
CLCN6-204ENST00000376491 LINC00208Q96KT6 92 aa6.07□□□□□ -1.44
CLCN6-204ENST00000376491 V9GYY9 64 aa6.06□□□□□ -1.44
CLCN6-204ENST00000376491 M0QZ58 72 aa6.05□□□□□ -1.44
CLCN6-204ENST00000376491 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
CLCN6-204ENST00000376491 K7ERU9 68 aa6.03□□□□□ -1.44
CLCN6-204ENST00000376491 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
CLCN6-204ENST00000376491 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
CLCN6-204ENST00000376491 C20orf197Q8N268 126 aa6□□□□□ -1.45
CLCN6-204ENST00000376491 OCR1Q9BZK8 76 aa5.98□□□□□ -1.45
CLCN6-204ENST00000376491 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
CLCN6-204ENST00000376491 LINC01554Q52M75 96 aa5.97□□□□□ -1.45
CLCN6-204ENST00000376491 MP68P56378 58 aa5.96□□□□□ -1.46
CLCN6-204ENST00000376491 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
CLCN6-204ENST00000376491 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
CLCN6-204ENST00000376491 LINC00643Q86TS7 51 aa5.93□□□□□ -1.46
CLCN6-204ENST00000376491 DMAC1Q96GE9 116 aa5.92□□□□□ -1.46
CLCN6-204ENST00000376491 H3BPC8 53 aa5.85□□□□□ -1.47
CLCN6-204ENST00000376491 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
CLCN6-204ENST00000376491 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
CLCN6-204ENST00000376491 MT-ATP8P03928 68 aa5.77□□□□□ -1.49
CLCN6-204ENST00000376491 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
CLCN6-204ENST00000376491 J3QR89 54 aa5.72□□□□□ -1.49
CLCN6-204ENST00000376491 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
CLCN6-204ENST00000376491 H3BS24 57 aa5.71□□□□□ -1.5
CLCN6-204ENST00000376491 ACYP2P14621 99 aa5.71□□□□□ -1.5
CLCN6-204ENST00000376491 ANAPC13Q9BS18 74 aa5.67□□□□□ -1.5
CLCN6-204ENST00000376491 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
CLCN6-204ENST00000376491 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
CLCN6-204ENST00000376491 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
CLCN6-204ENST00000376491 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
CLCN6-204ENST00000376491 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
CLCN6-204ENST00000376491 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
CLCN6-204ENST00000376491 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
CLCN6-204ENST00000376491 MT1EP04732 61 aa5.59□□□□□ -1.51
CLCN6-204ENST00000376491 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
CLCN6-204ENST00000376491 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
CLCN6-204ENST00000376491 PMAIP1Q13794 54 aa5.57□□□□□ -1.52
CLCN6-204ENST00000376491 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
CLCN6-204ENST00000376491 CCDC179H3BU77 68 aa5.46□□□□□ -1.54
CLCN6-204ENST00000376491 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
CLCN6-204ENST00000376491 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
CLCN6-204ENST00000376491 SNURFQ9Y675 71 aa5.45□□□□□ -1.54
CLCN6-204ENST00000376491 MT1GP13640 62 aa5.42□□□□□ -1.54
CLCN6-204ENST00000376491 A0A0D9SG42 100 aa5.41□□□□□ -1.54
CLCN6-204ENST00000376491 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
CLCN6-204ENST00000376491 SPANXA2-OT1Q8N9U9 137 aa5.4□□□□□ -1.54
CLCN6-204ENST00000376491 TMEM258P61165 79 aa5.38□□□□□ -1.55
CLCN6-204ENST00000376491 MT4P47944 62 aa5.36□□□□□ -1.55
CLCN6-204ENST00000376491 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
CLCN6-204ENST00000376491 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
CLCN6-204ENST00000376491 MT1MQ8N339 61 aa5.34□□□□□ -1.55
CLCN6-204ENST00000376491 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
CLCN6-204ENST00000376491 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
CLCN6-204ENST00000376491 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
CLCN6-204ENST00000376491 MT1LQ93083 61 aa5.3□□□□□ -1.56
CLCN6-204ENST00000376491 COA5Q86WW8 74 aa5.28□□□□□ -1.56
CLCN6-204ENST00000376491 SMIM26A0A096LP01 95 aa5.27□□□□□ -1.57
CLCN6-204ENST00000376491 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
CLCN6-204ENST00000376491 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms