RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MT1FP04733 61 aa5.37□□□□□ -1.55
HSPG2-202ENST00000374676 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
HSPG2-202ENST00000374676 COX7CP15954 63 aa5.36□□□□□ -1.55
HSPG2-202ENST00000374676 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
HSPG2-202ENST00000374676 NDUFC1O43677 76 aa5.33□□□□□ -1.56
HSPG2-202ENST00000374676 SPANXA2-OT1Q8N9U9 137 aa5.31□□□□□ -1.56
HSPG2-202ENST00000374676 ACYP2P14621 99 aa5.3□□□□□ -1.56
HSPG2-202ENST00000374676 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
HSPG2-202ENST00000374676 ANAPC13Q9BS18 74 aa5.29□□□□□ -1.56
HSPG2-202ENST00000374676 USH2AO75445 5202 aa5.25□□□□□ -1.57
HSPG2-202ENST00000374676 H0YAA0 97 aa5.24□□□□□ -1.57
HSPG2-202ENST00000374676 H7BZZ5 65 aa5.22□□□□□ -1.57
HSPG2-202ENST00000374676 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
HSPG2-202ENST00000374676 LCE2BO14633 110 aa5.21□□□□□ -1.58
HSPG2-202ENST00000374676 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
HSPG2-202ENST00000374676 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
HSPG2-202ENST00000374676 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
HSPG2-202ENST00000374676 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
HSPG2-202ENST00000374676 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
HSPG2-202ENST00000374676 CRIPTQ9P021 101 aa5.16□□□□□ -1.58
HSPG2-202ENST00000374676 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
HSPG2-202ENST00000374676 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
HSPG2-202ENST00000374676 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
HSPG2-202ENST00000374676 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
HSPG2-202ENST00000374676 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
HSPG2-202ENST00000374676 COA5Q86WW8 74 aa5.12□□□□□ -1.59
HSPG2-202ENST00000374676 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
HSPG2-202ENST00000374676 P0C880 135 aa5.08□□□□□ -1.6
HSPG2-202ENST00000374676 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
HSPG2-202ENST00000374676 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
HSPG2-202ENST00000374676 Q5VV11 94 aa5.02□□□□□ -1.61
HSPG2-202ENST00000374676 MT1BP07438 61 aa5.01□□□□□ -1.61
HSPG2-202ENST00000374676 TMEM258P61165 79 aa5.01□□□□□ -1.61
HSPG2-202ENST00000374676 R4GN34 69 aa5.01□□□□□ -1.61
HSPG2-202ENST00000374676 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
HSPG2-202ENST00000374676 M0QZ58 72 aa4.98□□□□□ -1.61
HSPG2-202ENST00000374676 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.61
HSPG2-202ENST00000374676 SEC61GP60059 68 aa4.94□□□□□ -1.62
HSPG2-202ENST00000374676 SERP1Q9Y6X1 66 aa4.93□□□□□ -1.62
HSPG2-202ENST00000374676 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
HSPG2-202ENST00000374676 PLAC4Q8WY50 150 aa4.87□□□□□ -1.63
HSPG2-202ENST00000374676 PCP4P48539 62 aa4.86□□□□□ -1.63
HSPG2-202ENST00000374676 A0A1B0GU69 56 aa4.85□□□□□ -1.63
HSPG2-202ENST00000374676 KRTAP10-5P60370 271 aa4.85□□□□□ -1.63
HSPG2-202ENST00000374676 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
HSPG2-202ENST00000374676 A0A1B0GU33 70 aa4.84□□□□□ -1.63
HSPG2-202ENST00000374676 A6NN06 94 aa4.84□□□□□ -1.63
HSPG2-202ENST00000374676 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
HSPG2-202ENST00000374676 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
HSPG2-202ENST00000374676 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
HSPG2-202ENST00000374676 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
HSPG2-202ENST00000374676 MT1XP80297 61 aa4.76□□□□□ -1.65
HSPG2-202ENST00000374676 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
HSPG2-202ENST00000374676 A0A0D9SG42 100 aa4.71□□□□□ -1.66
HSPG2-202ENST00000374676 V9GYY9 64 aa4.71□□□□□ -1.66
HSPG2-202ENST00000374676 SMIM26A0A096LP01 95 aa4.7□□□□□ -1.66
HSPG2-202ENST00000374676 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
HSPG2-202ENST00000374676 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
HSPG2-202ENST00000374676 Q1T7F1 81 aa4.69□□□□□ -1.66
HSPG2-202ENST00000374676 UQCR11O14957 56 aa4.65□□□□□ -1.67
HSPG2-202ENST00000374676 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
HSPG2-202ENST00000374676 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.67
HSPG2-202ENST00000374676 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
HSPG2-202ENST00000374676 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
HSPG2-202ENST00000374676 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
HSPG2-202ENST00000374676 A8MU10 97 aa4.63□□□□□ -1.67
HSPG2-202ENST00000374676 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
HSPG2-202ENST00000374676 PSPHP1O15172 72 aa4.6□□□□□ -1.67
HSPG2-202ENST00000374676 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
HSPG2-202ENST00000374676 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
HSPG2-202ENST00000374676 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
HSPG2-202ENST00000374676 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
HSPG2-202ENST00000374676 KMT2DO14686 5537 aa4.53□□□□□ -1.68
HSPG2-202ENST00000374676 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
HSPG2-202ENST00000374676 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
HSPG2-202ENST00000374676 A6NED7 52 aa4.46□□□□□ -1.7
HSPG2-202ENST00000374676 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
HSPG2-202ENST00000374676 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
HSPG2-202ENST00000374676 K7ERS5 55 aa4.43□□□□□ -1.7
HSPG2-202ENST00000374676 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
HSPG2-202ENST00000374676 MUC12Q9UKN1 5478 aa4.41□□□□□ -1.7
HSPG2-202ENST00000374676 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
HSPG2-202ENST00000374676 TNP1P09430 55 aa4.36□□□□□ -1.71
HSPG2-202ENST00000374676 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
HSPG2-202ENST00000374676 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
HSPG2-202ENST00000374676 NEBP20929 6669 aa4.34□□□□□ -1.72
HSPG2-202ENST00000374676 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
HSPG2-202ENST00000374676 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
HSPG2-202ENST00000374676 SPRR2EP22531 72 aa4.24□□□□□ -1.73
HSPG2-202ENST00000374676 SPRR2BP35325 72 aa4.24□□□□□ -1.73
HSPG2-202ENST00000374676 SPRR2AP35326 72 aa4.24□□□□□ -1.73
HSPG2-202ENST00000374676 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
HSPG2-202ENST00000374676 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
HSPG2-202ENST00000374676 MT1EP04732 61 aa4.2□□□□□ -1.74
HSPG2-202ENST00000374676 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
HSPG2-202ENST00000374676 ROMO1P60602 79 aa4.18□□□□□ -1.74
HSPG2-202ENST00000374676 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
HSPG2-202ENST00000374676 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
HSPG2-202ENST00000374676 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
HSPG2-202ENST00000374676 SPRR2DP22532 72 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms