RNA–Protein interactions for RNA: ENST00000374264.6

SUSD1-203, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUSD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-203ENST00000374264 BIRC6Q9NR09 4857 aa10.47□□□□□ -0.73
SUSD1-203ENST00000374264 MUC2Q02817 5179 aa10.42□□□□□ -0.74
SUSD1-203ENST00000374264 CDC42SE1Q9NRR8 79 aa10.42□□□□□ -0.74
SUSD1-203ENST00000374264 HERC1Q15751 4861 aa10.42□□□□□ -0.74
SUSD1-203ENST00000374264 TPRXLQ17RH7 258 aa10.41□□□□□ -0.74
SUSD1-203ENST00000374264 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.75
SUSD1-203ENST00000374264 PMAIP1Q13794 54 aa10.39□□□□□ -0.75
SUSD1-203ENST00000374264 SEC61GP60059 68 aa10.38□□□□□ -0.75
SUSD1-203ENST00000374264 UQCR11O14957 56 aa10.31□□□□□ -0.76
SUSD1-203ENST00000374264 MIR22HGQ0VDD5 57 aa10.29□□□□□ -0.76
SUSD1-203ENST00000374264 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.76
SUSD1-203ENST00000374264 S4R3F8 94 aa10.24□□□□□ -0.77
SUSD1-203ENST00000374264 SPATA8Q6RVD6 105 aa10.21□□□□□ -0.78
SUSD1-203ENST00000374264 A0A1B0GU33 70 aa10.17□□□□□ -0.78
SUSD1-203ENST00000374264 H0YAA0 97 aa10.14□□□□□ -0.79
SUSD1-203ENST00000374264 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
SUSD1-203ENST00000374264 MUC17Q685J3 4493 aa10.14□□□□□ -0.79
SUSD1-203ENST00000374264 KRTAP4-1Q9BYQ7 146 aa10.13□□□□□ -0.79
SUSD1-203ENST00000374264 RBM12B-AS1Q9P1G2 102 aa10.13□□□□□ -0.79
SUSD1-203ENST00000374264 A6NN06 94 aa10.1□□□□□ -0.79
SUSD1-203ENST00000374264 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
SUSD1-203ENST00000374264 P0C880 135 aa10.04□□□□□ -0.8
SUSD1-203ENST00000374264 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
SUSD1-203ENST00000374264 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
SUSD1-203ENST00000374264 A0A0D9SG42 100 aa9.99□□□□□ -0.81
SUSD1-203ENST00000374264 HMCN2Q8NDA2 5059 aa9.98□□□□□ -0.81
SUSD1-203ENST00000374264 ADM2Q7Z4H4 148 aa9.97□□□□□ -0.81
SUSD1-203ENST00000374264 KRTAP13-4Q3LI77 160 aa9.97□□□□□ -0.81
SUSD1-203ENST00000374264 RNF213Q63HN8 5207 aa9.94□□□□□ -0.82
SUSD1-203ENST00000374264 CSAG1Q6PB30 78 aa9.93□□□□□ -0.82
SUSD1-203ENST00000374264 FAT4Q6V0I7 4981 aa9.91□□□□□ -0.82
SUSD1-203ENST00000374264 KTN1-AS1Q86SY8 53 aa9.9□□□□□ -0.82
SUSD1-203ENST00000374264 PRAC1Q96KF2 57 aa9.88□□□□□ -0.83
SUSD1-203ENST00000374264 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
SUSD1-203ENST00000374264 KRTAP19-2Q3LHN2 52 aa9.7□□□□□ -0.86
SUSD1-203ENST00000374264 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
SUSD1-203ENST00000374264 CRIPTQ9P021 101 aa9.65□□□□□ -0.86
SUSD1-203ENST00000374264 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
SUSD1-203ENST00000374264 FLGP20930 4061 aaPredicted RBP9.64□□□□□ -0.87
SUSD1-203ENST00000374264 SPINT4Q6UDR6 99 aa9.64□□□□□ -0.87
SUSD1-203ENST00000374264 K7ERS5 55 aa9.63□□□□□ -0.87
SUSD1-203ENST00000374264 M0QZ58 72 aa9.59□□□□□ -0.87
SUSD1-203ENST00000374264 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
SUSD1-203ENST00000374264 R4GN34 69 aa9.56□□□□□ -0.88
SUSD1-203ENST00000374264 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
SUSD1-203ENST00000374264 LCE2CQ5TA81 110 aa9.36□□□□□ -0.91
SUSD1-203ENST00000374264 ROMO1P60602 79 aa9.36□□□□□ -0.91
SUSD1-203ENST00000374264 M0R2T5 61 aa9.35□□□□□ -0.91
SUSD1-203ENST00000374264 C10orf95Q9H7T3 257 aa9.27□□□□□ -0.93
SUSD1-203ENST00000374264 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
SUSD1-203ENST00000374264 MT1HP80294 61 aa9.17□□□□□ -0.94
SUSD1-203ENST00000374264 CAMK2N1Q7Z7J9 78 aa9.05□□□□□ -0.96
SUSD1-203ENST00000374264 KRTAP10-10P60014 251 aa8.98□□□□□ -0.97
SUSD1-203ENST00000374264 MT1FP04733 61 aa8.94□□□□□ -0.98
SUSD1-203ENST00000374264 MT2AP02795 61 aa8.91□□□□□ -0.98
SUSD1-203ENST00000374264 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
SUSD1-203ENST00000374264 KRTAP9-8Q9BYQ0 159 aa8.88□□□□□ -0.99
SUSD1-203ENST00000374264 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
SUSD1-203ENST00000374264 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
SUSD1-203ENST00000374264 USH2AO75445 5202 aa8.71□□□□□ -1.01
SUSD1-203ENST00000374264 TNP1P09430 55 aa8.52□□□□□ -1.05
SUSD1-203ENST00000374264 KRTAP9-3Q9BYQ3 159 aa8.5□□□□□ -1.05
SUSD1-203ENST00000374264 MT1BP07438 61 aa8.48□□□□□ -1.05
SUSD1-203ENST00000374264 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
SUSD1-203ENST00000374264 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
SUSD1-203ENST00000374264 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
SUSD1-203ENST00000374264 LCE2BO14633 110 aa8.33□□□□□ -1.08
SUSD1-203ENST00000374264 MT1XP80297 61 aa8.32□□□□□ -1.08
SUSD1-203ENST00000374264 KRTAP10-5P60370 271 aa8.31□□□□□ -1.08
SUSD1-203ENST00000374264 KMT2DO14686 5537 aa8.3□□□□□ -1.08
SUSD1-203ENST00000374264 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
SUSD1-203ENST00000374264 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
SUSD1-203ENST00000374264 LCE3AQ5TA76 89 aa8.23□□□□□ -1.09
SUSD1-203ENST00000374264 KRTAP10-7P60409 375 aaPredicted RBP8.15□□□□□ -1.11
SUSD1-203ENST00000374264 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
SUSD1-203ENST00000374264 KRTAP10-12P60413 245 aa8.01□□□□□ -1.13
SUSD1-203ENST00000374264 PRO2289Q9P1D8 64 aa8□□□□□ -1.13
SUSD1-203ENST00000374264 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
SUSD1-203ENST00000374264 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
SUSD1-203ENST00000374264 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
SUSD1-203ENST00000374264 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
SUSD1-203ENST00000374264 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
SUSD1-203ENST00000374264 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
SUSD1-203ENST00000374264 H3BS24 57 aa7.79□□□□□ -1.16
SUSD1-203ENST00000374264 LUZP6Q538Z0 58 aa7.71□□□□□ -1.18
SUSD1-203ENST00000374264 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
SUSD1-203ENST00000374264 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
SUSD1-203ENST00000374264 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
SUSD1-203ENST00000374264 MUC12Q9UKN1 5478 aa7.45□□□□□ -1.22
SUSD1-203ENST00000374264 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
SUSD1-203ENST00000374264 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
SUSD1-203ENST00000374264 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
SUSD1-203ENST00000374264 MACF1Q9UPN3 7388 aaKnown RBP7.28□□□□□ -1.24
SUSD1-203ENST00000374264 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
SUSD1-203ENST00000374264 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
SUSD1-203ENST00000374264 DSTQ03001 7570 aaKnown RBP7.21□□□□□ -1.26
SUSD1-203ENST00000374264 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
SUSD1-203ENST00000374264 MT1EP04732 61 aa7.2□□□□□ -1.26
SUSD1-203ENST00000374264 MT1LQ93083 61 aa7.14□□□□□ -1.27
SUSD1-203ENST00000374264 KRTAP9-6A8MVA2 160 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms