RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 DYNC2H1Q8NCM8 4307 aaKnown RBP4.04□□□□□ -1.76
HERC4-202ENST00000373700 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
HERC4-202ENST00000373700 KRTAP10-4P60372 401 aaPredicted RBP4.03□□□□□ -1.76
HERC4-202ENST00000373700 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
HERC4-202ENST00000373700 RYR1P21817 5038 aa4.01□□□□□ -1.77
HERC4-202ENST00000373700 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
HERC4-202ENST00000373700 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
HERC4-202ENST00000373700 P0C880 135 aa4□□□□□ -1.77
HERC4-202ENST00000373700 VPS13BQ7Z7G8 4022 aa4□□□□□ -1.77
HERC4-202ENST00000373700 RYR3Q15413 4870 aa3.99□□□□□ -1.77
HERC4-202ENST00000373700 SACSQ9NZJ4 4579 aa3.99□□□□□ -1.77
HERC4-202ENST00000373700 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
HERC4-202ENST00000373700 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
HERC4-202ENST00000373700 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
HERC4-202ENST00000373700 ALMS1Q8TCU4 4167 aa3.98□□□□□ -1.77
HERC4-202ENST00000373700 HECTD4Q9Y4D8 3996 aa3.97□□□□□ -1.77
HERC4-202ENST00000373700 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
HERC4-202ENST00000373700 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
HERC4-202ENST00000373700 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.78
HERC4-202ENST00000373700 H3BS24 57 aa3.93□□□□□ -1.78
HERC4-202ENST00000373700 FAT2Q9NYQ8 4349 aa3.9□□□□□ -1.79
HERC4-202ENST00000373700 KRTAP17-1Q9BYP8 105 aa3.89□□□□□ -1.79
HERC4-202ENST00000373700 RYR2Q92736 4967 aa3.87□□□□□ -1.79
HERC4-202ENST00000373700 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.79
HERC4-202ENST00000373700 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
HERC4-202ENST00000373700 KRTAP12-2P59991 146 aa3.82□□□□□ -1.8
HERC4-202ENST00000373700 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
HERC4-202ENST00000373700 PKD1P98161 4303 aa3.81□□□□□ -1.8
HERC4-202ENST00000373700 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
HERC4-202ENST00000373700 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
HERC4-202ENST00000373700 KRTAP3-3Q9BYR6 98 aa3.78□□□□□ -1.8
HERC4-202ENST00000373700 LRP2P98164 4655 aa3.77□□□□□ -1.81
HERC4-202ENST00000373700 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
HERC4-202ENST00000373700 HERC2O95714 4834 aa3.75□□□□□ -1.81
HERC4-202ENST00000373700 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
HERC4-202ENST00000373700 HSPG2P98160 4391 aa3.75□□□□□ -1.81
HERC4-202ENST00000373700 KRTAP3-2Q9BYR7 98 aa3.74□□□□□ -1.81
HERC4-202ENST00000373700 KRTAP10-10P60014 251 aa3.73□□□□□ -1.81
HERC4-202ENST00000373700 TNP1P09430 55 aa3.69□□□□□ -1.82
HERC4-202ENST00000373700 LPAP08519 4548 aa3.68□□□□□ -1.82
HERC4-202ENST00000373700 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
HERC4-202ENST00000373700 ABCA13Q86UQ4 5058 aa3.61□□□□□ -1.83
HERC4-202ENST00000373700 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
HERC4-202ENST00000373700 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
HERC4-202ENST00000373700 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
HERC4-202ENST00000373700 HERC1Q15751 4861 aa3.56□□□□□ -1.84
HERC4-202ENST00000373700 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
HERC4-202ENST00000373700 MUC2Q02817 5179 aa3.55□□□□□ -1.84
HERC4-202ENST00000373700 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
HERC4-202ENST00000373700 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
HERC4-202ENST00000373700 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.84
HERC4-202ENST00000373700 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
HERC4-202ENST00000373700 TNXBP22105 4242 aa3.5□□□□□ -1.85
HERC4-202ENST00000373700 UBR4Q5T4S7 5183 aa3.43□□□□□ -1.86
HERC4-202ENST00000373700 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
HERC4-202ENST00000373700 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
HERC4-202ENST00000373700 MT1HP80294 61 aa3.38□□□□□ -1.87
HERC4-202ENST00000373700 FSIP2Q5CZC0 6907 aa3.37□□□□□ -1.87
HERC4-202ENST00000373700 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
HERC4-202ENST00000373700 MT2AP02795 61 aa3.31□□□□□ -1.88
HERC4-202ENST00000373700 MT1FP04733 61 aa3.31□□□□□ -1.88
HERC4-202ENST00000373700 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
HERC4-202ENST00000373700 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
HERC4-202ENST00000373700 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
HERC4-202ENST00000373700 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
HERC4-202ENST00000373700 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
HERC4-202ENST00000373700 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
HERC4-202ENST00000373700 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
HERC4-202ENST00000373700 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
HERC4-202ENST00000373700 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
HERC4-202ENST00000373700 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
HERC4-202ENST00000373700 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
HERC4-202ENST00000373700 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
HERC4-202ENST00000373700 USH2AO75445 5202 aa3.08□□□□□ -1.92
HERC4-202ENST00000373700 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
HERC4-202ENST00000373700 MT1BP07438 61 aa3.06□□□□□ -1.92
HERC4-202ENST00000373700 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
HERC4-202ENST00000373700 LCE2BO14633 110 aa3.04□□□□□ -1.92
HERC4-202ENST00000373700 KRTAP9-3Q9BYQ3 159 aa3.03□□□□□ -1.92
HERC4-202ENST00000373700 MT1XP80297 61 aa3.01□□□□□ -1.93
HERC4-202ENST00000373700 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
HERC4-202ENST00000373700 KRTAP10-5P60370 271 aa3□□□□□ -1.93
HERC4-202ENST00000373700 KRTAP4-8A0A0G2JLE6 195 aa2.99□□□□□ -1.93
HERC4-202ENST00000373700 KRTAP4-8Q9BYQ9 185 aa2.99□□□□□ -1.93
HERC4-202ENST00000373700 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
HERC4-202ENST00000373700 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
HERC4-202ENST00000373700 LCE2AQ5TA79 106 aaPredicted RBP2.93□□□□□ -1.94
HERC4-202ENST00000373700 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
HERC4-202ENST00000373700 KMT2DO14686 5537 aa2.92□□□□□ -1.94
HERC4-202ENST00000373700 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
HERC4-202ENST00000373700 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
HERC4-202ENST00000373700 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
HERC4-202ENST00000373700 INE1O15225 51 aa2.85□□□□□ -1.95
HERC4-202ENST00000373700 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
HERC4-202ENST00000373700 KRTAP4-7Q9BYR0 210 aa2.81□□□□□ -1.96
HERC4-202ENST00000373700 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
HERC4-202ENST00000373700 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.96
HERC4-202ENST00000373700 KRTAP9-2Q9BYQ4 174 aa2.71□□□□□ -1.98
HERC4-202ENST00000373700 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
HERC4-202ENST00000373700 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms