RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ATOX1O00244 68 aa8.84□□□□□ -0.99
TRAPPC3-204ENST00000373166 CSAG1Q6PB30 78 aa8.83□□□□□ -1
TRAPPC3-204ENST00000373166 LCA10Q71F78 164 aa8.83□□□□□ -1
TRAPPC3-204ENST00000373166 A6NN06 94 aa8.82□□□□□ -1
TRAPPC3-204ENST00000373166 H0Y9P7 68 aa8.82□□□□□ -1
TRAPPC3-204ENST00000373166 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
TRAPPC3-204ENST00000373166 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
TRAPPC3-204ENST00000373166 J3QR89 54 aa8.78□□□□□ -1
TRAPPC3-204ENST00000373166 MDN1Q9NU22 5596 aa8.7□□□□□ -1.02
TRAPPC3-204ENST00000373166 MP68P56378 58 aa8.68□□□□□ -1.02
TRAPPC3-204ENST00000373166 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
TRAPPC3-204ENST00000373166 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
TRAPPC3-204ENST00000373166 MT1BP07438 61 aa8.66□□□□□ -1.02
TRAPPC3-204ENST00000373166 Q5VV11 94 aa8.66□□□□□ -1.02
TRAPPC3-204ENST00000373166 KMT2DO14686 5537 aa8.65□□□□□ -1.02
TRAPPC3-204ENST00000373166 KRTAP5-9P26371 169 aa8.64□□□□□ -1.03
TRAPPC3-204ENST00000373166 A8MUN3 132 aa8.62□□□□□ -1.03
TRAPPC3-204ENST00000373166 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
TRAPPC3-204ENST00000373166 NDUFC1O43677 76 aa8.59□□□□□ -1.03
TRAPPC3-204ENST00000373166 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
TRAPPC3-204ENST00000373166 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
TRAPPC3-204ENST00000373166 KRTAP19-8Q3LI54 63 aa8.57□□□□□ -1.04
TRAPPC3-204ENST00000373166 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
TRAPPC3-204ENST00000373166 H3BPC8 53 aa8.55□□□□□ -1.04
TRAPPC3-204ENST00000373166 IMUPQ9GZP8 106 aa8.55□□□□□ -1.04
TRAPPC3-204ENST00000373166 KRTAP2-3P0C7H8 128 aa8.5□□□□□ -1.05
TRAPPC3-204ENST00000373166 KRTAP2-4Q9BYR9 128 aa8.5□□□□□ -1.05
TRAPPC3-204ENST00000373166 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
TRAPPC3-204ENST00000373166 H0YAA0 97 aa8.47□□□□□ -1.05
TRAPPC3-204ENST00000373166 K7ERU9 68 aa8.47□□□□□ -1.05
TRAPPC3-204ENST00000373166 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
TRAPPC3-204ENST00000373166 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
TRAPPC3-204ENST00000373166 DMAC1Q96GE9 116 aa8.39□□□□□ -1.07
TRAPPC3-204ENST00000373166 SMIM20Q8N5G0 67 aa8.37□□□□□ -1.07
TRAPPC3-204ENST00000373166 TRAV7A0A075B6U4 112 aa8.33□□□□□ -1.08
TRAPPC3-204ENST00000373166 SPRR2EP22531 72 aa8.28□□□□□ -1.08
TRAPPC3-204ENST00000373166 SPRR2BP35325 72 aa8.28□□□□□ -1.08
TRAPPC3-204ENST00000373166 SPRR2AP35326 72 aa8.28□□□□□ -1.08
TRAPPC3-204ENST00000373166 SPRR2FQ96RM1 72 aa8.28□□□□□ -1.08
TRAPPC3-204ENST00000373166 C20orf197Q8N268 126 aa8.26□□□□□ -1.09
TRAPPC3-204ENST00000373166 ACYP2P14621 99 aa8.21□□□□□ -1.1
TRAPPC3-204ENST00000373166 KRTAP2-2Q9BYT5 123 aa8.2□□□□□ -1.1
TRAPPC3-204ENST00000373166 KRTAP2-1Q9BYU5 128 aa8.2□□□□□ -1.1
TRAPPC3-204ENST00000373166 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
TRAPPC3-204ENST00000373166 R4GN34 69 aa8.19□□□□□ -1.1
TRAPPC3-204ENST00000373166 P0C880 135 aa8.18□□□□□ -1.1
TRAPPC3-204ENST00000373166 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
TRAPPC3-204ENST00000373166 SNURFQ9Y675 71 aa8.14□□□□□ -1.11
TRAPPC3-204ENST00000373166 M0QZ58 72 aa8.12□□□□□ -1.11
TRAPPC3-204ENST00000373166 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
TRAPPC3-204ENST00000373166 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
TRAPPC3-204ENST00000373166 LCE1AQ5T7P2 110 aa8.09□□□□□ -1.11
TRAPPC3-204ENST00000373166 KRTAP8-1Q8IUC2 63 aa8.09□□□□□ -1.11
TRAPPC3-204ENST00000373166 PLAC4Q8WY50 150 aa8.09□□□□□ -1.11
TRAPPC3-204ENST00000373166 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
TRAPPC3-204ENST00000373166 SPANXA2-OT1Q8N9U9 137 aa8.04□□□□□ -1.12
TRAPPC3-204ENST00000373166 SPRR2DP22532 72 aa8.01□□□□□ -1.13
TRAPPC3-204ENST00000373166 LINC01554Q52M75 96 aa8□□□□□ -1.13
TRAPPC3-204ENST00000373166 MT1XP80297 61 aa7.99□□□□□ -1.13
TRAPPC3-204ENST00000373166 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
TRAPPC3-204ENST00000373166 COX7CP15954 63 aa7.85□□□□□ -1.15
TRAPPC3-204ENST00000373166 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
TRAPPC3-204ENST00000373166 KRTAP4-12Q9BQ66 201 aa7.84□□□□□ -1.15
TRAPPC3-204ENST00000373166 GPR98Q8WXG9 6306 aa7.84□□□□□ -1.15
TRAPPC3-204ENST00000373166 KRTAP4-8A0A0G2JLE6 195 aa7.82□□□□□ -1.16
TRAPPC3-204ENST00000373166 COA5Q86WW8 74 aa7.81□□□□□ -1.16
TRAPPC3-204ENST00000373166 H7BZZ5 65 aa7.7□□□□□ -1.18
TRAPPC3-204ENST00000373166 SEC61GP60059 68 aa7.68□□□□□ -1.18
TRAPPC3-204ENST00000373166 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
TRAPPC3-204ENST00000373166 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
TRAPPC3-204ENST00000373166 KRTAP9-9Q9BYP9 154 aa7.67□□□□□ -1.18
TRAPPC3-204ENST00000373166 KRTAP9-4Q9BYQ2 154 aa7.67□□□□□ -1.18
TRAPPC3-204ENST00000373166 DSTQ03001 7570 aaKnown RBP7.65□□□□□ -1.18
TRAPPC3-204ENST00000373166 SERP1Q9Y6X1 66 aa7.65□□□□□ -1.18
TRAPPC3-204ENST00000373166 ANAPC13Q9BS18 74 aa7.64□□□□□ -1.19
TRAPPC3-204ENST00000373166 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC3-204ENST00000373166 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
TRAPPC3-204ENST00000373166 CAMK2N1Q7Z7J9 78 aa7.57□□□□□ -1.2
TRAPPC3-204ENST00000373166 A0A0D9SG42 100 aa7.5□□□□□ -1.21
TRAPPC3-204ENST00000373166 A0A1B0GU33 70 aa7.5□□□□□ -1.21
TRAPPC3-204ENST00000373166 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
TRAPPC3-204ENST00000373166 CCDC179H3BU77 68 aa7.45□□□□□ -1.22
TRAPPC3-204ENST00000373166 A0A1B0GU69 56 aa7.43□□□□□ -1.22
TRAPPC3-204ENST00000373166 KRTAP4-9Q9BYQ8 210 aa7.43□□□□□ -1.22
TRAPPC3-204ENST00000373166 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC3-204ENST00000373166 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
TRAPPC3-204ENST00000373166 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
TRAPPC3-204ENST00000373166 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
TRAPPC3-204ENST00000373166 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
TRAPPC3-204ENST00000373166 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
TRAPPC3-204ENST00000373166 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
TRAPPC3-204ENST00000373166 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
TRAPPC3-204ENST00000373166 A8MU10 97 aa7.22□□□□□ -1.25
TRAPPC3-204ENST00000373166 TMEM258P61165 79 aa7.22□□□□□ -1.25
TRAPPC3-204ENST00000373166 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
TRAPPC3-204ENST00000373166 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
TRAPPC3-204ENST00000373166 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
TRAPPC3-204ENST00000373166 HMCN1Q96RW7 5635 aa7.14□□□□□ -1.27
TRAPPC3-204ENST00000373166 MT1EP04732 61 aa7.12□□□□□ -1.27
TRAPPC3-204ENST00000373166 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms