RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
BRD3-202ENST00000371834 RYR3Q15413 4870 aa11.85□□□□□ -0.51
BRD3-202ENST00000371834 RYR1P21817 5038 aa11.83□□□□□ -0.52
BRD3-202ENST00000371834 KRTAP17-1Q9BYP8 105 aa11.83□□□□□ -0.52
BRD3-202ENST00000371834 RPL37P61927 97 aaKnown RBP11.83□□□□□ -0.52
BRD3-202ENST00000371834 XP32Q5T750 250 aa11.8□□□□□ -0.52
BRD3-202ENST00000371834 CSAG1Q6PB30 78 aa11.76□□□□□ -0.53
BRD3-202ENST00000371834 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
BRD3-202ENST00000371834 LINC01554Q52M75 96 aa11.7□□□□□ -0.54
BRD3-202ENST00000371834 KIAA1109Q2LD37 5005 aa11.69□□□□□ -0.54
BRD3-202ENST00000371834 MT1HL1P0DM35 61 aa11.63□□□□□ -0.55
BRD3-202ENST00000371834 KRTAP10-6P60371 365 aaPredicted RBP11.62□□□□□ -0.55
BRD3-202ENST00000371834 S4R3F8 94 aa11.59□□□□□ -0.55
BRD3-202ENST00000371834 LPAP08519 4548 aa11.55□□□□□ -0.56
BRD3-202ENST00000371834 KRTAP3-2Q9BYR7 98 aa11.55□□□□□ -0.56
BRD3-202ENST00000371834 KRTAP13-4Q3LI77 160 aa11.53□□□□□ -0.56
BRD3-202ENST00000371834 K7ERS5 55 aa11.48□□□□□ -0.57
BRD3-202ENST00000371834 LRP2P98164 4655 aa11.46□□□□□ -0.57
BRD3-202ENST00000371834 A0A0D9SG42 100 aa11.45□□□□□ -0.58
BRD3-202ENST00000371834 P0C880 135 aa11.43□□□□□ -0.58
BRD3-202ENST00000371834 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
BRD3-202ENST00000371834 KRTAP25-1Q3LHN0 102 aa11.41□□□□□ -0.58
BRD3-202ENST00000371834 CRIPTQ9P021 101 aa11.38□□□□□ -0.59
BRD3-202ENST00000371834 ABCA13Q86UQ4 5058 aa11.31□□□□□ -0.6
BRD3-202ENST00000371834 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
BRD3-202ENST00000371834 ROMO1P60602 79 aa11.27□□□□□ -0.61
BRD3-202ENST00000371834 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
BRD3-202ENST00000371834 A0A0A0MQY5 61 aa11.18□□□□□ -0.62
BRD3-202ENST00000371834 KRTAP12-2P59991 146 aa11.14□□□□□ -0.63
BRD3-202ENST00000371834 KRTAP12-1P59990 96 aa11.04□□□□□ -0.64
BRD3-202ENST00000371834 SPINT4Q6UDR6 99 aa11.04□□□□□ -0.64
BRD3-202ENST00000371834 C10orf95Q9H7T3 257 aa10.97□□□□□ -0.65
BRD3-202ENST00000371834 M0QZ58 72 aa10.95□□□□□ -0.66
BRD3-202ENST00000371834 MUC17Q685J3 4493 aa10.95□□□□□ -0.66
BRD3-202ENST00000371834 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
BRD3-202ENST00000371834 KRTAP4-1Q9BYQ7 146 aa10.87□□□□□ -0.67
BRD3-202ENST00000371834 HERC2O95714 4834 aa10.77□□□□□ -0.68
BRD3-202ENST00000371834 J3QL48 77 aa10.77□□□□□ -0.69
BRD3-202ENST00000371834 R4GN34 69 aa10.76□□□□□ -0.69
BRD3-202ENST00000371834 LORP23490 312 aaPredicted RBP10.73□□□□□ -0.69
BRD3-202ENST00000371834 KRTAP19-2Q3LHN2 52 aa10.63□□□□□ -0.71
BRD3-202ENST00000371834 MUC2Q02817 5179 aa10.57□□□□□ -0.72
BRD3-202ENST00000371834 BIRC6Q9NR09 4857 aa10.41□□□□□ -0.74
BRD3-202ENST00000371834 KRTAP15-1Q3LI76 137 aa10.4□□□□□ -0.75
BRD3-202ENST00000371834 FLGP20930 4061 aaPredicted RBP10.35□□□□□ -0.75
BRD3-202ENST00000371834 HERC1Q15751 4861 aa10.3□□□□□ -0.76
BRD3-202ENST00000371834 NDUFAF8A1L188 74 aa10.28□□□□□ -0.76
BRD3-202ENST00000371834 CAMK2N1Q7Z7J9 78 aa10.22□□□□□ -0.77
BRD3-202ENST00000371834 PCLOQ9Y6V0 5065 aa10.2□□□□□ -0.78
BRD3-202ENST00000371834 HMCN2Q8NDA2 5059 aa10.19□□□□□ -0.78
BRD3-202ENST00000371834 FAT4Q6V0I7 4981 aa10.07□□□□□ -0.8
BRD3-202ENST00000371834 LUZP6Q538Z0 58 aa10.03□□□□□ -0.8
BRD3-202ENST00000371834 LCE2CQ5TA81 110 aa10.01□□□□□ -0.81
BRD3-202ENST00000371834 PLAC4Q8WY50 150 aa9.98□□□□□ -0.81
BRD3-202ENST00000371834 PP632Q6XCG6 107 aa9.92□□□□□ -0.82
BRD3-202ENST00000371834 RNF213Q63HN8 5207 aa9.81□□□□□ -0.84
BRD3-202ENST00000371834 TNP1P09430 55 aa9.8□□□□□ -0.84
BRD3-202ENST00000371834 UBR4Q5T4S7 5183 aa9.77□□□□□ -0.85
BRD3-202ENST00000371834 M0R2T5 61 aa9.77□□□□□ -0.85
BRD3-202ENST00000371834 KRTAP19-1Q8IUB9 90 aa9.76□□□□□ -0.85
BRD3-202ENST00000371834 SPRR2GQ9BYE4 73 aa9.76□□□□□ -0.85
BRD3-202ENST00000371834 MT1HP80294 61 aa9.73□□□□□ -0.85
BRD3-202ENST00000371834 MT1FP04733 61 aa9.59□□□□□ -0.87
BRD3-202ENST00000371834 KRTAP23-1A1A580 65 aa9.58□□□□□ -0.88
BRD3-202ENST00000371834 MT2AP02795 61 aa9.57□□□□□ -0.88
BRD3-202ENST00000371834 KRTAP10-10P60014 251 aa9.56□□□□□ -0.88
BRD3-202ENST00000371834 KRTAP9-8Q9BYQ0 159 aa9.51□□□□□ -0.89
BRD3-202ENST00000371834 LCE3AQ5TA76 89 aa9.35□□□□□ -0.91
BRD3-202ENST00000371834 KRTAP19-8Q3LI54 63 aa9.32□□□□□ -0.92
BRD3-202ENST00000371834 SPRR5A0A1B0GTR4 108 aa9.28□□□□□ -0.92
BRD3-202ENST00000371834 MT1BP07438 61 aa9.26□□□□□ -0.93
BRD3-202ENST00000371834 KRTAP10-5P60370 271 aa9.2□□□□□ -0.94
BRD3-202ENST00000371834 MT1XP80297 61 aa9.18□□□□□ -0.94
BRD3-202ENST00000371834 KRTAP9-3Q9BYQ3 159 aa9.1□□□□□ -0.95
BRD3-202ENST00000371834 KRTAP8-1Q8IUC2 63 aa9.06□□□□□ -0.96
BRD3-202ENST00000371834 KRTAP10-12P60413 245 aa8.97□□□□□ -0.97
BRD3-202ENST00000371834 KRTAP10-7P60409 375 aaPredicted RBP8.95□□□□□ -0.98
BRD3-202ENST00000371834 KRTAP12-3P60328 96 aa8.88□□□□□ -0.99
BRD3-202ENST00000371834 LCE2BO14633 110 aa8.77□□□□□ -1.01
BRD3-202ENST00000371834 PRO2289Q9P1D8 64 aa8.77□□□□□ -1.01
BRD3-202ENST00000371834 USH2AO75445 5202 aa8.74□□□□□ -1.01
BRD3-202ENST00000371834 KMT2DO14686 5537 aa8.59□□□□□ -1.03
BRD3-202ENST00000371834 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
BRD3-202ENST00000371834 KRTAP19-5Q3LI72 72 aa8.56□□□□□ -1.04
BRD3-202ENST00000371834 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
BRD3-202ENST00000371834 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
BRD3-202ENST00000371834 LCE3CQ5T5A8 94 aa8.35□□□□□ -1.07
BRD3-202ENST00000371834 KRTAP19-7Q3SYF9 63 aa8.19□□□□□ -1.1
BRD3-202ENST00000371834 INE1O15225 51 aa8.13□□□□□ -1.11
BRD3-202ENST00000371834 KRTAP9-6A8MVA2 160 aa8.11□□□□□ -1.11
BRD3-202ENST00000371834 SSPOA2VEC9 5147 aa8.09□□□□□ -1.11
BRD3-202ENST00000371834 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
BRD3-202ENST00000371834 MT1EP04732 61 aa7.94□□□□□ -1.14
BRD3-202ENST00000371834 MT1LQ93083 61 aa7.93□□□□□ -1.14
BRD3-202ENST00000371834 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
BRD3-202ENST00000371834 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
BRD3-202ENST00000371834 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
BRD3-202ENST00000371834 KRTAP2-3P0C7H8 128 aa7.74□□□□□ -1.17
BRD3-202ENST00000371834 KRTAP2-4Q9BYR9 128 aa7.74□□□□□ -1.17
BRD3-202ENST00000371834 KRTAP2-1Q9BYU5 128 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms