RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 FAT1Q14517 4588 aa4.66□□□□□ -1.66
SMARCA1-203ENST00000371123 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
SMARCA1-203ENST00000371123 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SMARCA1-203ENST00000371123 KRTAP1-4P0C5Y4 121 aa4.64□□□□□ -1.67
SMARCA1-203ENST00000371123 HSPG2P98160 4391 aa4.63□□□□□ -1.67
SMARCA1-203ENST00000371123 COX6B2Q6YFQ2 88 aa4.63□□□□□ -1.67
SMARCA1-203ENST00000371123 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
SMARCA1-203ENST00000371123 APOBP04114 4563 aaKnown RBP4.59□□□□□ -1.67
SMARCA1-203ENST00000371123 Q5VSD8 79 aa4.59□□□□□ -1.68
SMARCA1-203ENST00000371123 A0A1B0GVY2 172 aa4.58□□□□□ -1.68
SMARCA1-203ENST00000371123 C20orf166-AS1Q96NR2 134 aa4.57□□□□□ -1.68
SMARCA1-203ENST00000371123 LPAP08519 4548 aa4.57□□□□□ -1.68
SMARCA1-203ENST00000371123 KRTAP3-3Q9BYR6 98 aa4.55□□□□□ -1.68
SMARCA1-203ENST00000371123 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
SMARCA1-203ENST00000371123 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
SMARCA1-203ENST00000371123 J3QL48 77 aa4.54□□□□□ -1.68
SMARCA1-203ENST00000371123 S4R3F8 94 aa4.54□□□□□ -1.68
SMARCA1-203ENST00000371123 TNXBP22105 4242 aa4.53□□□□□ -1.68
SMARCA1-203ENST00000371123 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
SMARCA1-203ENST00000371123 RPL37P61927 97 aaKnown RBP4.52□□□□□ -1.69
SMARCA1-203ENST00000371123 M0QZ58 72 aa4.48□□□□□ -1.69
SMARCA1-203ENST00000371123 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
SMARCA1-203ENST00000371123 R4GN34 69 aa4.47□□□□□ -1.69
SMARCA1-203ENST00000371123 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.69
SMARCA1-203ENST00000371123 A0A0A0MQY5 61 aa4.46□□□□□ -1.69
SMARCA1-203ENST00000371123 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.7
SMARCA1-203ENST00000371123 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
SMARCA1-203ENST00000371123 RYR1P21817 5038 aa4.43□□□□□ -1.7
SMARCA1-203ENST00000371123 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
SMARCA1-203ENST00000371123 HERC2O95714 4834 aa4.42□□□□□ -1.7
SMARCA1-203ENST00000371123 XP32Q5T750 250 aa4.38□□□□□ -1.71
SMARCA1-203ENST00000371123 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
SMARCA1-203ENST00000371123 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
SMARCA1-203ENST00000371123 M0R2T5 61 aa4.36□□□□□ -1.71
SMARCA1-203ENST00000371123 KIAA1109Q2LD37 5005 aa4.34□□□□□ -1.71
SMARCA1-203ENST00000371123 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SMARCA1-203ENST00000371123 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
SMARCA1-203ENST00000371123 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
SMARCA1-203ENST00000371123 LRP2P98164 4655 aa4.23□□□□□ -1.73
SMARCA1-203ENST00000371123 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
SMARCA1-203ENST00000371123 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
SMARCA1-203ENST00000371123 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-203ENST00000371123 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
SMARCA1-203ENST00000371123 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
SMARCA1-203ENST00000371123 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
SMARCA1-203ENST00000371123 MUC2Q02817 5179 aa4.11□□□□□ -1.75
SMARCA1-203ENST00000371123 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
SMARCA1-203ENST00000371123 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
SMARCA1-203ENST00000371123 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
SMARCA1-203ENST00000371123 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
SMARCA1-203ENST00000371123 TNP1P09430 55 aa3.95□□□□□ -1.78
SMARCA1-203ENST00000371123 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
SMARCA1-203ENST00000371123 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
SMARCA1-203ENST00000371123 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
SMARCA1-203ENST00000371123 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
SMARCA1-203ENST00000371123 FAT4Q6V0I7 4981 aa3.91□□□□□ -1.78
SMARCA1-203ENST00000371123 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
SMARCA1-203ENST00000371123 HERC1Q15751 4861 aa3.89□□□□□ -1.79
SMARCA1-203ENST00000371123 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
SMARCA1-203ENST00000371123 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
SMARCA1-203ENST00000371123 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
SMARCA1-203ENST00000371123 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
SMARCA1-203ENST00000371123 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
SMARCA1-203ENST00000371123 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
SMARCA1-203ENST00000371123 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
SMARCA1-203ENST00000371123 USH2AO75445 5202 aa3.61□□□□□ -1.83
SMARCA1-203ENST00000371123 LCE2CQ5TA81 110 aa3.59□□□□□ -1.83
SMARCA1-203ENST00000371123 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
SMARCA1-203ENST00000371123 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
SMARCA1-203ENST00000371123 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
SMARCA1-203ENST00000371123 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
SMARCA1-203ENST00000371123 KMT2DO14686 5537 aa3.55□□□□□ -1.84
SMARCA1-203ENST00000371123 INE1O15225 51 aa3.49□□□□□ -1.85
SMARCA1-203ENST00000371123 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
SMARCA1-203ENST00000371123 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
SMARCA1-203ENST00000371123 MT1FP04733 61 aa3.46□□□□□ -1.86
SMARCA1-203ENST00000371123 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
SMARCA1-203ENST00000371123 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
SMARCA1-203ENST00000371123 MT1HP80294 61 aa3.44□□□□□ -1.86
SMARCA1-203ENST00000371123 MT2AP02795 61 aa3.41□□□□□ -1.86
SMARCA1-203ENST00000371123 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
SMARCA1-203ENST00000371123 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
SMARCA1-203ENST00000371123 LCE2DQ5TA82 110 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-203ENST00000371123 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-203ENST00000371123 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
SMARCA1-203ENST00000371123 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP4-8A0A0G2JLE6 195 aa3.32□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
SMARCA1-203ENST00000371123 MT1XP80297 61 aa3.3□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
SMARCA1-203ENST00000371123 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
SMARCA1-203ENST00000371123 MT1BP07438 61 aa3.24□□□□□ -1.89
SMARCA1-203ENST00000371123 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
SMARCA1-203ENST00000371123 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-203ENST00000371123 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms