RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 FAT1Q14517 4588 aa4.66□□□□□ -1.66
SMARCA1-203ENST00000371123 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
SMARCA1-203ENST00000371123 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SMARCA1-203ENST00000371123 KRTAP1-4P0C5Y4 121 aa4.64□□□□□ -1.67
SMARCA1-203ENST00000371123 HSPG2P98160 4391 aa4.63□□□□□ -1.67
SMARCA1-203ENST00000371123 COX6B2Q6YFQ2 88 aa4.63□□□□□ -1.67
SMARCA1-203ENST00000371123 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
SMARCA1-203ENST00000371123 APOBP04114 4563 aaKnown RBP4.59□□□□□ -1.67
SMARCA1-203ENST00000371123 Q5VSD8 79 aa4.59□□□□□ -1.68
SMARCA1-203ENST00000371123 A0A1B0GVY2 172 aa4.58□□□□□ -1.68
SMARCA1-203ENST00000371123 C20orf166-AS1Q96NR2 134 aa4.57□□□□□ -1.68
SMARCA1-203ENST00000371123 LPAP08519 4548 aa4.57□□□□□ -1.68
SMARCA1-203ENST00000371123 KRTAP3-3Q9BYR6 98 aa4.55□□□□□ -1.68
SMARCA1-203ENST00000371123 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
SMARCA1-203ENST00000371123 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
SMARCA1-203ENST00000371123 J3QL48 77 aa4.54□□□□□ -1.68
SMARCA1-203ENST00000371123 S4R3F8 94 aa4.54□□□□□ -1.68
SMARCA1-203ENST00000371123 TNXBP22105 4242 aa4.53□□□□□ -1.68
SMARCA1-203ENST00000371123 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
SMARCA1-203ENST00000371123 RPL37P61927 97 aaKnown RBP4.52□□□□□ -1.69
SMARCA1-203ENST00000371123 M0QZ58 72 aa4.48□□□□□ -1.69
SMARCA1-203ENST00000371123 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
SMARCA1-203ENST00000371123 R4GN34 69 aa4.47□□□□□ -1.69
SMARCA1-203ENST00000371123 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.69
SMARCA1-203ENST00000371123 A0A0A0MQY5 61 aa4.46□□□□□ -1.69
SMARCA1-203ENST00000371123 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.7
SMARCA1-203ENST00000371123 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
SMARCA1-203ENST00000371123 RYR1P21817 5038 aa4.43□□□□□ -1.7
SMARCA1-203ENST00000371123 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
SMARCA1-203ENST00000371123 HERC2O95714 4834 aa4.42□□□□□ -1.7
SMARCA1-203ENST00000371123 XP32Q5T750 250 aa4.38□□□□□ -1.71
SMARCA1-203ENST00000371123 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
SMARCA1-203ENST00000371123 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
SMARCA1-203ENST00000371123 M0R2T5 61 aa4.36□□□□□ -1.71
SMARCA1-203ENST00000371123 KIAA1109Q2LD37 5005 aa4.34□□□□□ -1.71
SMARCA1-203ENST00000371123 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SMARCA1-203ENST00000371123 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
SMARCA1-203ENST00000371123 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
SMARCA1-203ENST00000371123 LRP2P98164 4655 aa4.23□□□□□ -1.73
SMARCA1-203ENST00000371123 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
SMARCA1-203ENST00000371123 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
SMARCA1-203ENST00000371123 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-203ENST00000371123 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
SMARCA1-203ENST00000371123 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
SMARCA1-203ENST00000371123 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
SMARCA1-203ENST00000371123 MUC2Q02817 5179 aa4.11□□□□□ -1.75
SMARCA1-203ENST00000371123 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
SMARCA1-203ENST00000371123 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
SMARCA1-203ENST00000371123 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
SMARCA1-203ENST00000371123 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
SMARCA1-203ENST00000371123 TNP1P09430 55 aa3.95□□□□□ -1.78
SMARCA1-203ENST00000371123 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
SMARCA1-203ENST00000371123 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
SMARCA1-203ENST00000371123 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
SMARCA1-203ENST00000371123 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
SMARCA1-203ENST00000371123 FAT4Q6V0I7 4981 aa3.91□□□□□ -1.78
SMARCA1-203ENST00000371123 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
SMARCA1-203ENST00000371123 HERC1Q15751 4861 aa3.89□□□□□ -1.79
SMARCA1-203ENST00000371123 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
SMARCA1-203ENST00000371123 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
SMARCA1-203ENST00000371123 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
SMARCA1-203ENST00000371123 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
SMARCA1-203ENST00000371123 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
SMARCA1-203ENST00000371123 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
SMARCA1-203ENST00000371123 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
SMARCA1-203ENST00000371123 USH2AO75445 5202 aa3.61□□□□□ -1.83
SMARCA1-203ENST00000371123 LCE2CQ5TA81 110 aa3.59□□□□□ -1.83
SMARCA1-203ENST00000371123 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
SMARCA1-203ENST00000371123 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
SMARCA1-203ENST00000371123 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
SMARCA1-203ENST00000371123 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
SMARCA1-203ENST00000371123 KMT2DO14686 5537 aa3.55□□□□□ -1.84
SMARCA1-203ENST00000371123 INE1O15225 51 aa3.49□□□□□ -1.85
SMARCA1-203ENST00000371123 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
SMARCA1-203ENST00000371123 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
SMARCA1-203ENST00000371123 MT1FP04733 61 aa3.46□□□□□ -1.86
SMARCA1-203ENST00000371123 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
SMARCA1-203ENST00000371123 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
SMARCA1-203ENST00000371123 MT1HP80294 61 aa3.44□□□□□ -1.86
SMARCA1-203ENST00000371123 MT2AP02795 61 aa3.41□□□□□ -1.86
SMARCA1-203ENST00000371123 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
SMARCA1-203ENST00000371123 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
SMARCA1-203ENST00000371123 LCE2DQ5TA82 110 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-203ENST00000371123 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-203ENST00000371123 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
SMARCA1-203ENST00000371123 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP4-8A0A0G2JLE6 195 aa3.32□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
SMARCA1-203ENST00000371123 MT1XP80297 61 aa3.3□□□□□ -1.88
SMARCA1-203ENST00000371123 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
SMARCA1-203ENST00000371123 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
SMARCA1-203ENST00000371123 MT1BP07438 61 aa3.24□□□□□ -1.89
SMARCA1-203ENST00000371123 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
SMARCA1-203ENST00000371123 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-203ENST00000371123 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
SMARCA1-203ENST00000371123 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms