RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 KRTAP6-3Q3LI67 103 aa7.04□□□□□ -1.28
SS18L1-202ENST00000370848 LINC00208Q96KT6 92 aa7.04□□□□□ -1.28
SS18L1-202ENST00000370848 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
SS18L1-202ENST00000370848 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
SS18L1-202ENST00000370848 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
SS18L1-202ENST00000370848 MP68P56378 58 aa6.99□□□□□ -1.29
SS18L1-202ENST00000370848 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
SS18L1-202ENST00000370848 SMIM20Q8N5G0 67 aa6.98□□□□□ -1.29
SS18L1-202ENST00000370848 H3BPC8 53 aa6.96□□□□□ -1.3
SS18L1-202ENST00000370848 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
SS18L1-202ENST00000370848 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
SS18L1-202ENST00000370848 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
SS18L1-202ENST00000370848 TRAV7A0A075B6U4 112 aa6.89□□□□□ -1.31
SS18L1-202ENST00000370848 A8MUN3 132 aa6.87□□□□□ -1.31
SS18L1-202ENST00000370848 NDUFC1O43677 76 aa6.84□□□□□ -1.31
SS18L1-202ENST00000370848 NEBP20929 6669 aa6.82□□□□□ -1.32
SS18L1-202ENST00000370848 MT1BP07438 61 aa6.81□□□□□ -1.32
SS18L1-202ENST00000370848 MUC12Q9UKN1 5478 aa6.8□□□□□ -1.32
SS18L1-202ENST00000370848 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
SS18L1-202ENST00000370848 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
SS18L1-202ENST00000370848 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
SS18L1-202ENST00000370848 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
SS18L1-202ENST00000370848 A6NN06 94 aa6.74□□□□□ -1.33
SS18L1-202ENST00000370848 H0YAA0 97 aa6.73□□□□□ -1.33
SS18L1-202ENST00000370848 Q5VV11 94 aa6.72□□□□□ -1.33
SS18L1-202ENST00000370848 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
SS18L1-202ENST00000370848 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
SS18L1-202ENST00000370848 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
SS18L1-202ENST00000370848 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
SS18L1-202ENST00000370848 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
SS18L1-202ENST00000370848 COX7CP15954 63 aa6.66□□□□□ -1.34
SS18L1-202ENST00000370848 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
SS18L1-202ENST00000370848 SPANXA2-OT1Q8N9U9 137 aa6.63□□□□□ -1.35
SS18L1-202ENST00000370848 P0C880 135 aa6.62□□□□□ -1.35
SS18L1-202ENST00000370848 KMT2DO14686 5537 aa6.62□□□□□ -1.35
SS18L1-202ENST00000370848 ACYP2P14621 99 aa6.61□□□□□ -1.35
SS18L1-202ENST00000370848 MDN1Q9NU22 5596 aa6.59□□□□□ -1.35
SS18L1-202ENST00000370848 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
SS18L1-202ENST00000370848 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
SS18L1-202ENST00000370848 CHKB-CPT1BH3BT56 60 aa6.51□□□□□ -1.37
SS18L1-202ENST00000370848 R4GN34 69 aa6.49□□□□□ -1.37
SS18L1-202ENST00000370848 M0QZ58 72 aa6.48□□□□□ -1.37
SS18L1-202ENST00000370848 H7BZZ5 65 aa6.47□□□□□ -1.37
SS18L1-202ENST00000370848 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
SS18L1-202ENST00000370848 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.38
SS18L1-202ENST00000370848 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
SS18L1-202ENST00000370848 COA5Q86WW8 74 aa6.39□□□□□ -1.39
SS18L1-202ENST00000370848 CCDC179H3BU77 68 aa6.37□□□□□ -1.39
SS18L1-202ENST00000370848 MT1XP80297 61 aa6.37□□□□□ -1.39
SS18L1-202ENST00000370848 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
SS18L1-202ENST00000370848 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
SS18L1-202ENST00000370848 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
SS18L1-202ENST00000370848 ATP5EP56381 51 aaPredicted RBP6.33□□□□□ -1.4
SS18L1-202ENST00000370848 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
SS18L1-202ENST00000370848 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
SS18L1-202ENST00000370848 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
SS18L1-202ENST00000370848 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
SS18L1-202ENST00000370848 TMEM258P61165 79 aa6.25□□□□□ -1.41
SS18L1-202ENST00000370848 SPRR2EP22531 72 aa6.24□□□□□ -1.41
SS18L1-202ENST00000370848 SPRR2BP35325 72 aa6.24□□□□□ -1.41
SS18L1-202ENST00000370848 SPRR2AP35326 72 aa6.24□□□□□ -1.41
SS18L1-202ENST00000370848 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.42
SS18L1-202ENST00000370848 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
SS18L1-202ENST00000370848 SEC61GP60059 68 aa6.15□□□□□ -1.42
SS18L1-202ENST00000370848 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
SS18L1-202ENST00000370848 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
SS18L1-202ENST00000370848 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
SS18L1-202ENST00000370848 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
SS18L1-202ENST00000370848 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
SS18L1-202ENST00000370848 A0A0D9SG42 100 aa6.07□□□□□ -1.44
SS18L1-202ENST00000370848 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
SS18L1-202ENST00000370848 A0A1B0GU33 70 aa6.06□□□□□ -1.44
SS18L1-202ENST00000370848 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
SS18L1-202ENST00000370848 SPRR2DP22532 72 aa6.04□□□□□ -1.44
SS18L1-202ENST00000370848 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
SS18L1-202ENST00000370848 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
SS18L1-202ENST00000370848 A0A1B0GU69 56 aa6.02□□□□□ -1.45
SS18L1-202ENST00000370848 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
SS18L1-202ENST00000370848 PCP4P48539 62 aa6.01□□□□□ -1.45
SS18L1-202ENST00000370848 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
SS18L1-202ENST00000370848 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
SS18L1-202ENST00000370848 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
SS18L1-202ENST00000370848 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
SS18L1-202ENST00000370848 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
SS18L1-202ENST00000370848 A8MU10 97 aa5.92□□□□□ -1.46
SS18L1-202ENST00000370848 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
SS18L1-202ENST00000370848 V9GYY9 64 aa5.89□□□□□ -1.47
SS18L1-202ENST00000370848 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
SS18L1-202ENST00000370848 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
SS18L1-202ENST00000370848 Q1T7F1 81 aa5.83□□□□□ -1.48
SS18L1-202ENST00000370848 UQCR11O14957 56 aa5.79□□□□□ -1.48
SS18L1-202ENST00000370848 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
SS18L1-202ENST00000370848 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
SS18L1-202ENST00000370848 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
SS18L1-202ENST00000370848 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
SS18L1-202ENST00000370848 PSPHP1O15172 72 aa5.66□□□□□ -1.5
SS18L1-202ENST00000370848 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.51
SS18L1-202ENST00000370848 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
SS18L1-202ENST00000370848 MT1EP04732 61 aa5.63□□□□□ -1.51
SS18L1-202ENST00000370848 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms