RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 KRTAP6-3Q3LI67 103 aa7.04□□□□□ -1.28
SS18L1-202ENST00000370848 LINC00208Q96KT6 92 aa7.04□□□□□ -1.28
SS18L1-202ENST00000370848 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
SS18L1-202ENST00000370848 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
SS18L1-202ENST00000370848 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
SS18L1-202ENST00000370848 MP68P56378 58 aa6.99□□□□□ -1.29
SS18L1-202ENST00000370848 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
SS18L1-202ENST00000370848 SMIM20Q8N5G0 67 aa6.98□□□□□ -1.29
SS18L1-202ENST00000370848 H3BPC8 53 aa6.96□□□□□ -1.3
SS18L1-202ENST00000370848 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
SS18L1-202ENST00000370848 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
SS18L1-202ENST00000370848 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
SS18L1-202ENST00000370848 TRAV7A0A075B6U4 112 aa6.89□□□□□ -1.31
SS18L1-202ENST00000370848 A8MUN3 132 aa6.87□□□□□ -1.31
SS18L1-202ENST00000370848 NDUFC1O43677 76 aa6.84□□□□□ -1.31
SS18L1-202ENST00000370848 NEBP20929 6669 aa6.82□□□□□ -1.32
SS18L1-202ENST00000370848 MT1BP07438 61 aa6.81□□□□□ -1.32
SS18L1-202ENST00000370848 MUC12Q9UKN1 5478 aa6.8□□□□□ -1.32
SS18L1-202ENST00000370848 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
SS18L1-202ENST00000370848 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
SS18L1-202ENST00000370848 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
SS18L1-202ENST00000370848 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
SS18L1-202ENST00000370848 A6NN06 94 aa6.74□□□□□ -1.33
SS18L1-202ENST00000370848 H0YAA0 97 aa6.73□□□□□ -1.33
SS18L1-202ENST00000370848 Q5VV11 94 aa6.72□□□□□ -1.33
SS18L1-202ENST00000370848 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
SS18L1-202ENST00000370848 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
SS18L1-202ENST00000370848 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
SS18L1-202ENST00000370848 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
SS18L1-202ENST00000370848 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
SS18L1-202ENST00000370848 COX7CP15954 63 aa6.66□□□□□ -1.34
SS18L1-202ENST00000370848 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
SS18L1-202ENST00000370848 SPANXA2-OT1Q8N9U9 137 aa6.63□□□□□ -1.35
SS18L1-202ENST00000370848 P0C880 135 aa6.62□□□□□ -1.35
SS18L1-202ENST00000370848 KMT2DO14686 5537 aa6.62□□□□□ -1.35
SS18L1-202ENST00000370848 ACYP2P14621 99 aa6.61□□□□□ -1.35
SS18L1-202ENST00000370848 MDN1Q9NU22 5596 aa6.59□□□□□ -1.35
SS18L1-202ENST00000370848 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
SS18L1-202ENST00000370848 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
SS18L1-202ENST00000370848 CHKB-CPT1BH3BT56 60 aa6.51□□□□□ -1.37
SS18L1-202ENST00000370848 R4GN34 69 aa6.49□□□□□ -1.37
SS18L1-202ENST00000370848 M0QZ58 72 aa6.48□□□□□ -1.37
SS18L1-202ENST00000370848 H7BZZ5 65 aa6.47□□□□□ -1.37
SS18L1-202ENST00000370848 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
SS18L1-202ENST00000370848 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.38
SS18L1-202ENST00000370848 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
SS18L1-202ENST00000370848 COA5Q86WW8 74 aa6.39□□□□□ -1.39
SS18L1-202ENST00000370848 CCDC179H3BU77 68 aa6.37□□□□□ -1.39
SS18L1-202ENST00000370848 MT1XP80297 61 aa6.37□□□□□ -1.39
SS18L1-202ENST00000370848 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
SS18L1-202ENST00000370848 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
SS18L1-202ENST00000370848 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
SS18L1-202ENST00000370848 ATP5EP56381 51 aaPredicted RBP6.33□□□□□ -1.4
SS18L1-202ENST00000370848 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
SS18L1-202ENST00000370848 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
SS18L1-202ENST00000370848 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
SS18L1-202ENST00000370848 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
SS18L1-202ENST00000370848 TMEM258P61165 79 aa6.25□□□□□ -1.41
SS18L1-202ENST00000370848 SPRR2EP22531 72 aa6.24□□□□□ -1.41
SS18L1-202ENST00000370848 SPRR2BP35325 72 aa6.24□□□□□ -1.41
SS18L1-202ENST00000370848 SPRR2AP35326 72 aa6.24□□□□□ -1.41
SS18L1-202ENST00000370848 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.42
SS18L1-202ENST00000370848 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
SS18L1-202ENST00000370848 SEC61GP60059 68 aa6.15□□□□□ -1.42
SS18L1-202ENST00000370848 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
SS18L1-202ENST00000370848 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
SS18L1-202ENST00000370848 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
SS18L1-202ENST00000370848 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
SS18L1-202ENST00000370848 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
SS18L1-202ENST00000370848 A0A0D9SG42 100 aa6.07□□□□□ -1.44
SS18L1-202ENST00000370848 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
SS18L1-202ENST00000370848 A0A1B0GU33 70 aa6.06□□□□□ -1.44
SS18L1-202ENST00000370848 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
SS18L1-202ENST00000370848 SPRR2DP22532 72 aa6.04□□□□□ -1.44
SS18L1-202ENST00000370848 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
SS18L1-202ENST00000370848 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
SS18L1-202ENST00000370848 A0A1B0GU69 56 aa6.02□□□□□ -1.45
SS18L1-202ENST00000370848 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
SS18L1-202ENST00000370848 PCP4P48539 62 aa6.01□□□□□ -1.45
SS18L1-202ENST00000370848 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
SS18L1-202ENST00000370848 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
SS18L1-202ENST00000370848 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
SS18L1-202ENST00000370848 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
SS18L1-202ENST00000370848 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
SS18L1-202ENST00000370848 A8MU10 97 aa5.92□□□□□ -1.46
SS18L1-202ENST00000370848 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
SS18L1-202ENST00000370848 V9GYY9 64 aa5.89□□□□□ -1.47
SS18L1-202ENST00000370848 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
SS18L1-202ENST00000370848 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
SS18L1-202ENST00000370848 Q1T7F1 81 aa5.83□□□□□ -1.48
SS18L1-202ENST00000370848 UQCR11O14957 56 aa5.79□□□□□ -1.48
SS18L1-202ENST00000370848 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
SS18L1-202ENST00000370848 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
SS18L1-202ENST00000370848 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
SS18L1-202ENST00000370848 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
SS18L1-202ENST00000370848 PSPHP1O15172 72 aa5.66□□□□□ -1.5
SS18L1-202ENST00000370848 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.51
SS18L1-202ENST00000370848 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
SS18L1-202ENST00000370848 MT1EP04732 61 aa5.63□□□□□ -1.51
SS18L1-202ENST00000370848 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms