RNA–Protein interactions for RNA: ENST00000370691.6

LAMA5-203, Transcript of laminin subunit alpha 5, humanhuman

TSL 1 (best)

Gene LAMA5, Length 3,160 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-203ENST00000370691 TYMSOSQ8TAI1 123 aa7.69□□□□□ -1.18
LAMA5-203ENST00000370691 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
LAMA5-203ENST00000370691 DMBT1Q9UGM3 2413 aaPredicted RBP7.66□□□□□ -1.18
LAMA5-203ENST00000370691 A0A1B0GU33 70 aa7.66□□□□□ -1.18
LAMA5-203ENST00000370691 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
LAMA5-203ENST00000370691 RYR1P21817 5038 aa7.64□□□□□ -1.19
LAMA5-203ENST00000370691 Q5VSD8 79 aa7.64□□□□□ -1.19
LAMA5-203ENST00000370691 Q8N1X5 172 aa7.62□□□□□ -1.19
LAMA5-203ENST00000370691 PKHD1L1Q86WI1 4243 aa7.57□□□□□ -1.2
LAMA5-203ENST00000370691 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
LAMA5-203ENST00000370691 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
LAMA5-203ENST00000370691 LUZP6Q538Z0 58 aa7.49□□□□□ -1.21
LAMA5-203ENST00000370691 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
LAMA5-203ENST00000370691 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
LAMA5-203ENST00000370691 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
LAMA5-203ENST00000370691 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
LAMA5-203ENST00000370691 C9orf92A6NGG3 77 aa7.44□□□□□ -1.22
LAMA5-203ENST00000370691 TNXBP22105 4242 aa7.44□□□□□ -1.22
LAMA5-203ENST00000370691 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
LAMA5-203ENST00000370691 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
LAMA5-203ENST00000370691 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
LAMA5-203ENST00000370691 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
LAMA5-203ENST00000370691 A0A0D9SG42 100 aa7.32□□□□□ -1.24
LAMA5-203ENST00000370691 HERC2O95714 4834 aa7.31□□□□□ -1.24
LAMA5-203ENST00000370691 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
LAMA5-203ENST00000370691 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
LAMA5-203ENST00000370691 BIRC6Q9NR09 4857 aa7.24□□□□□ -1.25
LAMA5-203ENST00000370691 LPAP08519 4548 aa7.22□□□□□ -1.25
LAMA5-203ENST00000370691 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
LAMA5-203ENST00000370691 PCLOQ9Y6V0 5065 aa7.16□□□□□ -1.26
LAMA5-203ENST00000370691 LRP2P98164 4655 aa7.16□□□□□ -1.26
LAMA5-203ENST00000370691 J3QL48 77 aa7.14□□□□□ -1.27
LAMA5-203ENST00000370691 HERC1Q15751 4861 aa7.12□□□□□ -1.27
LAMA5-203ENST00000370691 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
LAMA5-203ENST00000370691 XP32Q5T750 250 aa7.06□□□□□ -1.28
LAMA5-203ENST00000370691 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
LAMA5-203ENST00000370691 S4R3F8 94 aa7.04□□□□□ -1.28
LAMA5-203ENST00000370691 MUC2Q02817 5179 aa6.99□□□□□ -1.29
LAMA5-203ENST00000370691 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
LAMA5-203ENST00000370691 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
LAMA5-203ENST00000370691 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
LAMA5-203ENST00000370691 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
LAMA5-203ENST00000370691 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
LAMA5-203ENST00000370691 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
LAMA5-203ENST00000370691 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
LAMA5-203ENST00000370691 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
LAMA5-203ENST00000370691 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
LAMA5-203ENST00000370691 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
LAMA5-203ENST00000370691 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.34
LAMA5-203ENST00000370691 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
LAMA5-203ENST00000370691 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
LAMA5-203ENST00000370691 M0QZ58 72 aa6.55□□□□□ -1.36
LAMA5-203ENST00000370691 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
LAMA5-203ENST00000370691 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
LAMA5-203ENST00000370691 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
LAMA5-203ENST00000370691 R4GN34 69 aa6.35□□□□□ -1.39
LAMA5-203ENST00000370691 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
LAMA5-203ENST00000370691 M0R2T5 61 aa6.26□□□□□ -1.41
LAMA5-203ENST00000370691 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
LAMA5-203ENST00000370691 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
LAMA5-203ENST00000370691 MT1HP80294 61 aa6.15□□□□□ -1.42
LAMA5-203ENST00000370691 INE1O15225 51 aa6.1□□□□□ -1.43
LAMA5-203ENST00000370691 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
LAMA5-203ENST00000370691 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
LAMA5-203ENST00000370691 TNP1P09430 55 aa5.95□□□□□ -1.46
LAMA5-203ENST00000370691 MT1FP04733 61 aa5.94□□□□□ -1.46
LAMA5-203ENST00000370691 MT2AP02795 61 aa5.93□□□□□ -1.46
LAMA5-203ENST00000370691 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
LAMA5-203ENST00000370691 USH2AO75445 5202 aa5.87□□□□□ -1.47
LAMA5-203ENST00000370691 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
LAMA5-203ENST00000370691 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
LAMA5-203ENST00000370691 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
LAMA5-203ENST00000370691 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
LAMA5-203ENST00000370691 SPRR2GQ9BYE4 73 aa5.73□□□□□ -1.49
LAMA5-203ENST00000370691 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
LAMA5-203ENST00000370691 LCE2BO14633 110 aa5.59□□□□□ -1.51
LAMA5-203ENST00000370691 MT1BP07438 61 aa5.58□□□□□ -1.52
LAMA5-203ENST00000370691 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
LAMA5-203ENST00000370691 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
LAMA5-203ENST00000370691 KMT2DO14686 5537 aa5.46□□□□□ -1.54
LAMA5-203ENST00000370691 MT1XP80297 61 aa5.44□□□□□ -1.54
LAMA5-203ENST00000370691 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
LAMA5-203ENST00000370691 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
LAMA5-203ENST00000370691 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
LAMA5-203ENST00000370691 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
LAMA5-203ENST00000370691 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
LAMA5-203ENST00000370691 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
LAMA5-203ENST00000370691 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
LAMA5-203ENST00000370691 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
LAMA5-203ENST00000370691 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
LAMA5-203ENST00000370691 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
LAMA5-203ENST00000370691 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
LAMA5-203ENST00000370691 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
LAMA5-203ENST00000370691 MACF1Q9UPN3 7388 aaKnown RBP5.01□□□□□ -1.61
LAMA5-203ENST00000370691 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
LAMA5-203ENST00000370691 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
LAMA5-203ENST00000370691 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
LAMA5-203ENST00000370691 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
LAMA5-203ENST00000370691 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
LAMA5-203ENST00000370691 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms