RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ACYP2P14621 99 aa8.53□□□□□ -1.04
LMO4-201ENST00000370542 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
LMO4-201ENST00000370542 C8orf87E5RJ46 101 aa8.49□□□□□ -1.05
LMO4-201ENST00000370542 IGHV6-1A0A0B4J1U7 121 aa8.47□□□□□ -1.05
LMO4-201ENST00000370542 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
LMO4-201ENST00000370542 SPINK7P58062 85 aa8.46□□□□□ -1.06
LMO4-201ENST00000370542 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
LMO4-201ENST00000370542 IGLV9-49A0A0B4J1Y8 123 aa8.42□□□□□ -1.06
LMO4-201ENST00000370542 DMAC1Q96GE9 116 aa8.4□□□□□ -1.06
LMO4-201ENST00000370542 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
LMO4-201ENST00000370542 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
LMO4-201ENST00000370542 A0A1B0GU69 56 aa8.35□□□□□ -1.07
LMO4-201ENST00000370542 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
LMO4-201ENST00000370542 LINC00313P59037 77 aa8.32□□□□□ -1.08
LMO4-201ENST00000370542 SPINK1P00995 79 aa8.31□□□□□ -1.08
LMO4-201ENST00000370542 SSBP3-AS1Q7Z2R9 100 aa8.31□□□□□ -1.08
LMO4-201ENST00000370542 UQCR11O14957 56 aa8.3□□□□□ -1.08
LMO4-201ENST00000370542 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
LMO4-201ENST00000370542 Q5W150 140 aa8.26□□□□□ -1.09
LMO4-201ENST00000370542 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
LMO4-201ENST00000370542 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
LMO4-201ENST00000370542 LINC01554Q52M75 96 aa8.24□□□□□ -1.09
LMO4-201ENST00000370542 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
LMO4-201ENST00000370542 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.1
LMO4-201ENST00000370542 KRTAP4-1Q9BYQ7 146 aa8.18□□□□□ -1.1
LMO4-201ENST00000370542 SEC61BP60468 96 aaKnown RBP8.15□□□□□ -1.1
LMO4-201ENST00000370542 XP32Q5T750 250 aa8.15□□□□□ -1.1
LMO4-201ENST00000370542 PRAC1Q96KF2 57 aa8.12□□□□□ -1.11
LMO4-201ENST00000370542 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
LMO4-201ENST00000370542 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
LMO4-201ENST00000370542 KRTAP19-2Q3LHN2 52 aa8.03□□□□□ -1.12
LMO4-201ENST00000370542 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
LMO4-201ENST00000370542 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
LMO4-201ENST00000370542 C9orf92A6NGG3 77 aa7.91□□□□□ -1.14
LMO4-201ENST00000370542 MT1HP80294 61 aa7.91□□□□□ -1.14
LMO4-201ENST00000370542 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
LMO4-201ENST00000370542 A8MUU9 505 aa7.85□□□□□ -1.15
LMO4-201ENST00000370542 K7ERS5 55 aa7.85□□□□□ -1.15
LMO4-201ENST00000370542 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
LMO4-201ENST00000370542 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
LMO4-201ENST00000370542 H3BS24 57 aa7.83□□□□□ -1.16
LMO4-201ENST00000370542 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
LMO4-201ENST00000370542 A0A1B0GU33 70 aa7.79□□□□□ -1.16
LMO4-201ENST00000370542 SSPOA2VEC9 5147 aa7.79□□□□□ -1.16
LMO4-201ENST00000370542 SYNE2Q8WXH0 6885 aaKnown RBP7.78□□□□□ -1.16
LMO4-201ENST00000370542 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
LMO4-201ENST00000370542 USH2AO75445 5202 aa7.75□□□□□ -1.17
LMO4-201ENST00000370542 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
LMO4-201ENST00000370542 H0YAA0 97 aa7.74□□□□□ -1.17
LMO4-201ENST00000370542 MACF1Q9UPN3 7388 aaKnown RBP7.7□□□□□ -1.18
LMO4-201ENST00000370542 ROMO1P60602 79 aa7.68□□□□□ -1.18
LMO4-201ENST00000370542 C20orf166-AS1Q96NR2 134 aa7.67□□□□□ -1.18
LMO4-201ENST00000370542 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
LMO4-201ENST00000370542 M0R2T5 61 aa7.63□□□□□ -1.19
LMO4-201ENST00000370542 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
LMO4-201ENST00000370542 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
LMO4-201ENST00000370542 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
LMO4-201ENST00000370542 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.22
LMO4-201ENST00000370542 NEBP20929 6669 aa7.37□□□□□ -1.23
LMO4-201ENST00000370542 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
LMO4-201ENST00000370542 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
LMO4-201ENST00000370542 MT2AP02795 61 aa7.33□□□□□ -1.24
LMO4-201ENST00000370542 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
LMO4-201ENST00000370542 P0C880 135 aa7.3□□□□□ -1.24
LMO4-201ENST00000370542 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
LMO4-201ENST00000370542 MT1FP04733 61 aa7.27□□□□□ -1.25
LMO4-201ENST00000370542 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
LMO4-201ENST00000370542 S4R3F8 94 aa7.24□□□□□ -1.25
LMO4-201ENST00000370542 KRTAP20-1Q3LI63 56 aa7.22□□□□□ -1.25
LMO4-201ENST00000370542 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
LMO4-201ENST00000370542 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
LMO4-201ENST00000370542 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
LMO4-201ENST00000370542 A0A0D9SG42 100 aa7.16□□□□□ -1.26
LMO4-201ENST00000370542 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.26
LMO4-201ENST00000370542 M0QZ58 72 aa7.13□□□□□ -1.27
LMO4-201ENST00000370542 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
LMO4-201ENST00000370542 NDUFAF8A1L188 74 aa7.03□□□□□ -1.28
LMO4-201ENST00000370542 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
LMO4-201ENST00000370542 KRTAP12-2P59991 146 aa7□□□□□ -1.29
LMO4-201ENST00000370542 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
LMO4-201ENST00000370542 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
LMO4-201ENST00000370542 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.31
LMO4-201ENST00000370542 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
LMO4-201ENST00000370542 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
LMO4-201ENST00000370542 KMT2DO14686 5537 aa6.8□□□□□ -1.32
LMO4-201ENST00000370542 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
LMO4-201ENST00000370542 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
LMO4-201ENST00000370542 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
LMO4-201ENST00000370542 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
LMO4-201ENST00000370542 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
LMO4-201ENST00000370542 R4GN34 69 aa6.71□□□□□ -1.34
LMO4-201ENST00000370542 MT1BP07438 61 aa6.66□□□□□ -1.34
LMO4-201ENST00000370542 LUZP6Q538Z0 58 aa6.65□□□□□ -1.34
LMO4-201ENST00000370542 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
LMO4-201ENST00000370542 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
LMO4-201ENST00000370542 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
LMO4-201ENST00000370542 A0A0A0MQY5 61 aa6.61□□□□□ -1.35
LMO4-201ENST00000370542 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
LMO4-201ENST00000370542 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
LMO4-201ENST00000370542 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms