RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 Q6ZSA8 131 aa6.17□□□□□ -1.42
TWNK-202ENST00000370228 PSORS1C2Q9UIG4 136 aa6.17□□□□□ -1.42
TWNK-202ENST00000370228 HERC2O95714 4834 aa6.16□□□□□ -1.42
TWNK-202ENST00000370228 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
TWNK-202ENST00000370228 Q5VSD8 79 aa6.13□□□□□ -1.43
TWNK-202ENST00000370228 TPRXLQ17RH7 258 aa6.08□□□□□ -1.44
TWNK-202ENST00000370228 FAT3Q8TDW7 4589 aa6.08□□□□□ -1.44
TWNK-202ENST00000370228 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
TWNK-202ENST00000370228 HERC1Q15751 4861 aa6.06□□□□□ -1.44
TWNK-202ENST00000370228 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
TWNK-202ENST00000370228 Q8N1X5 172 aa6.02□□□□□ -1.45
TWNK-202ENST00000370228 A0A1B0GU33 70 aa6.01□□□□□ -1.45
TWNK-202ENST00000370228 PKHD1L1Q86WI1 4243 aa6□□□□□ -1.45
TWNK-202ENST00000370228 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
TWNK-202ENST00000370228 SPINK1P00995 79 aa5.98□□□□□ -1.45
TWNK-202ENST00000370228 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
TWNK-202ENST00000370228 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.46
TWNK-202ENST00000370228 TYMSOSQ8TAI1 123 aa5.95□□□□□ -1.46
TWNK-202ENST00000370228 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
TWNK-202ENST00000370228 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.47
TWNK-202ENST00000370228 TNXBP22105 4242 aa5.88□□□□□ -1.47
TWNK-202ENST00000370228 J3QL48 77 aa5.87□□□□□ -1.47
TWNK-202ENST00000370228 KRTAP13-2Q52LG2 175 aa5.87□□□□□ -1.47
TWNK-202ENST00000370228 LPAP08519 4548 aa5.83□□□□□ -1.48
TWNK-202ENST00000370228 LRP2P98164 4655 aa5.82□□□□□ -1.48
TWNK-202ENST00000370228 MT1HL1P0DM35 61 aa5.78□□□□□ -1.48
TWNK-202ENST00000370228 MUC2Q02817 5179 aa5.78□□□□□ -1.48
TWNK-202ENST00000370228 RPL37P61927 97 aaKnown RBP5.77□□□□□ -1.49
TWNK-202ENST00000370228 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
TWNK-202ENST00000370228 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
TWNK-202ENST00000370228 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
TWNK-202ENST00000370228 KRTAP10-8P60410 259 aa5.72□□□□□ -1.49
TWNK-202ENST00000370228 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
TWNK-202ENST00000370228 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
TWNK-202ENST00000370228 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
TWNK-202ENST00000370228 A0A0D9SG42 100 aa5.61□□□□□ -1.51
TWNK-202ENST00000370228 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
TWNK-202ENST00000370228 XP32Q5T750 250 aa5.57□□□□□ -1.52
TWNK-202ENST00000370228 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
TWNK-202ENST00000370228 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
TWNK-202ENST00000370228 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
TWNK-202ENST00000370228 S4R3F8 94 aa5.54□□□□□ -1.52
TWNK-202ENST00000370228 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
TWNK-202ENST00000370228 KRTAP10-6P60371 365 aaPredicted RBP5.5□□□□□ -1.53
TWNK-202ENST00000370228 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
TWNK-202ENST00000370228 KRTAP12-2P59991 146 aa5.48□□□□□ -1.53
TWNK-202ENST00000370228 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
TWNK-202ENST00000370228 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
TWNK-202ENST00000370228 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
TWNK-202ENST00000370228 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
TWNK-202ENST00000370228 R4GN34 69 aa5.26□□□□□ -1.57
TWNK-202ENST00000370228 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
TWNK-202ENST00000370228 INE1O15225 51 aa5.12□□□□□ -1.59
TWNK-202ENST00000370228 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
TWNK-202ENST00000370228 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
TWNK-202ENST00000370228 M0QZ58 72 aa5.07□□□□□ -1.6
TWNK-202ENST00000370228 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
TWNK-202ENST00000370228 M0R2T5 61 aa5.02□□□□□ -1.61
TWNK-202ENST00000370228 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
TWNK-202ENST00000370228 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
TWNK-202ENST00000370228 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
TWNK-202ENST00000370228 MT1HP80294 61 aa4.91□□□□□ -1.62
TWNK-202ENST00000370228 USH2AO75445 5202 aa4.9□□□□□ -1.62
TWNK-202ENST00000370228 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
TWNK-202ENST00000370228 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
TWNK-202ENST00000370228 LORP23490 312 aaPredicted RBP4.74□□□□□ -1.65
TWNK-202ENST00000370228 KRTAP10-10P60014 251 aa4.71□□□□□ -1.66
TWNK-202ENST00000370228 MT1FP04733 61 aa4.67□□□□□ -1.66
TWNK-202ENST00000370228 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
TWNK-202ENST00000370228 MT2AP02795 61 aa4.66□□□□□ -1.66
TWNK-202ENST00000370228 TNP1P09430 55 aa4.59□□□□□ -1.67
TWNK-202ENST00000370228 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
TWNK-202ENST00000370228 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
TWNK-202ENST00000370228 LCE2BO14633 110 aa4.49□□□□□ -1.69
TWNK-202ENST00000370228 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
TWNK-202ENST00000370228 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
TWNK-202ENST00000370228 KMT2DO14686 5537 aa4.41□□□□□ -1.7
TWNK-202ENST00000370228 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
TWNK-202ENST00000370228 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
TWNK-202ENST00000370228 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
TWNK-202ENST00000370228 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
TWNK-202ENST00000370228 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
TWNK-202ENST00000370228 MT1BP07438 61 aa4.3□□□□□ -1.72
TWNK-202ENST00000370228 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
TWNK-202ENST00000370228 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
TWNK-202ENST00000370228 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
TWNK-202ENST00000370228 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
TWNK-202ENST00000370228 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
TWNK-202ENST00000370228 MT1XP80297 61 aa4.13□□□□□ -1.75
TWNK-202ENST00000370228 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
TWNK-202ENST00000370228 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
TWNK-202ENST00000370228 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
TWNK-202ENST00000370228 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
TWNK-202ENST00000370228 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
TWNK-202ENST00000370228 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
TWNK-202ENST00000370228 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
TWNK-202ENST00000370228 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
TWNK-202ENST00000370228 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
TWNK-202ENST00000370228 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
TWNK-202ENST00000370228 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms