RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
LCA5-201ENST00000369846 DNAH11Q96DT5 4516 aa4.34□□□□□ -1.71
LCA5-201ENST00000369846 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
LCA5-201ENST00000369846 A0A1B0GVY2 172 aa4.32□□□□□ -1.72
LCA5-201ENST00000369846 XP32Q5T750 250 aa4.32□□□□□ -1.72
LCA5-201ENST00000369846 LRP1BQ9NZR2 4599 aa4.3□□□□□ -1.72
LCA5-201ENST00000369846 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
LCA5-201ENST00000369846 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
LCA5-201ENST00000369846 DYNC2H1Q8NCM8 4307 aaKnown RBP4.27□□□□□ -1.73
LCA5-201ENST00000369846 FAT2Q9NYQ8 4349 aa4.25□□□□□ -1.73
LCA5-201ENST00000369846 DNAH5Q8TE73 4624 aa4.24□□□□□ -1.73
LCA5-201ENST00000369846 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
LCA5-201ENST00000369846 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
LCA5-201ENST00000369846 HYDINQ4G0P3 5121 aa4.2□□□□□ -1.74
LCA5-201ENST00000369846 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
LCA5-201ENST00000369846 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
LCA5-201ENST00000369846 INE1O15225 51 aa4.15□□□□□ -1.74
LCA5-201ENST00000369846 PKHD1P08F94 4074 aa4.15□□□□□ -1.74
LCA5-201ENST00000369846 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
LCA5-201ENST00000369846 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
LCA5-201ENST00000369846 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
LCA5-201ENST00000369846 PKD1P98161 4303 aa4.1□□□□□ -1.75
LCA5-201ENST00000369846 FAT1Q14517 4588 aa4.1□□□□□ -1.75
LCA5-201ENST00000369846 MYCBP2O75592 4640 aa4.05□□□□□ -1.76
LCA5-201ENST00000369846 DYNC1H1Q14204 4646 aaKnown RBP3.99□□□□□ -1.77
LCA5-201ENST00000369846 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
LCA5-201ENST00000369846 HSPG2P98160 4391 aa3.97□□□□□ -1.77
LCA5-201ENST00000369846 KRTAP3-2Q9BYR7 98 aa3.94□□□□□ -1.78
LCA5-201ENST00000369846 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
LCA5-201ENST00000369846 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
LCA5-201ENST00000369846 LPAP08519 4548 aa3.91□□□□□ -1.78
LCA5-201ENST00000369846 KRTAP3-3Q9BYR6 98 aa3.9□□□□□ -1.79
LCA5-201ENST00000369846 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
LCA5-201ENST00000369846 FAT3Q8TDW7 4589 aa3.88□□□□□ -1.79
LCA5-201ENST00000369846 KMT2CQ8NEZ4 4911 aaKnown RBP3.82□□□□□ -1.8
LCA5-201ENST00000369846 LRP2P98164 4655 aa3.8□□□□□ -1.8
LCA5-201ENST00000369846 KRTAP10-4P60372 401 aaPredicted RBP3.79□□□□□ -1.8
LCA5-201ENST00000369846 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.81
LCA5-201ENST00000369846 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
LCA5-201ENST00000369846 TNXBP22105 4242 aa3.75□□□□□ -1.81
LCA5-201ENST00000369846 RYR1P21817 5038 aa3.74□□□□□ -1.81
LCA5-201ENST00000369846 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
LCA5-201ENST00000369846 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
LCA5-201ENST00000369846 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
LCA5-201ENST00000369846 KIAA1109Q2LD37 5005 aa3.68□□□□□ -1.82
LCA5-201ENST00000369846 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
LCA5-201ENST00000369846 KRTAP17-1Q9BYP8 105 aa3.67□□□□□ -1.82
LCA5-201ENST00000369846 RYR2Q92736 4967 aa3.67□□□□□ -1.82
LCA5-201ENST00000369846 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
LCA5-201ENST00000369846 LORP23490 312 aaPredicted RBP3.64□□□□□ -1.83
LCA5-201ENST00000369846 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
LCA5-201ENST00000369846 MUC2Q02817 5179 aa3.61□□□□□ -1.83
LCA5-201ENST00000369846 RYR3Q15413 4870 aa3.6□□□□□ -1.83
LCA5-201ENST00000369846 EPPK1P58107 5090 aaKnown RBP3.56□□□□□ -1.84
LCA5-201ENST00000369846 MT1HL1P0DM35 61 aa3.52□□□□□ -1.85
LCA5-201ENST00000369846 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
LCA5-201ENST00000369846 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
LCA5-201ENST00000369846 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.87
LCA5-201ENST00000369846 PCLOQ9Y6V0 5065 aa3.38□□□□□ -1.87
LCA5-201ENST00000369846 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
LCA5-201ENST00000369846 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
LCA5-201ENST00000369846 HERC2O95714 4834 aa3.27□□□□□ -1.89
LCA5-201ENST00000369846 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
LCA5-201ENST00000369846 HERC1Q15751 4861 aa3.25□□□□□ -1.89
LCA5-201ENST00000369846 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
LCA5-201ENST00000369846 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
LCA5-201ENST00000369846 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
LCA5-201ENST00000369846 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
LCA5-201ENST00000369846 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
LCA5-201ENST00000369846 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
LCA5-201ENST00000369846 BIRC6Q9NR09 4857 aa3.18□□□□□ -1.9
LCA5-201ENST00000369846 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
LCA5-201ENST00000369846 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
LCA5-201ENST00000369846 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
LCA5-201ENST00000369846 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
LCA5-201ENST00000369846 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.9
LCA5-201ENST00000369846 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
LCA5-201ENST00000369846 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
LCA5-201ENST00000369846 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
LCA5-201ENST00000369846 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
LCA5-201ENST00000369846 MT2AP02795 61 aa3.07□□□□□ -1.92
LCA5-201ENST00000369846 KMT2DO14686 5537 aa3.06□□□□□ -1.92
LCA5-201ENST00000369846 MT1HP80294 61 aa3.06□□□□□ -1.92
LCA5-201ENST00000369846 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
LCA5-201ENST00000369846 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
LCA5-201ENST00000369846 LCE2CQ5TA81 110 aa3.03□□□□□ -1.92
LCA5-201ENST00000369846 USH2AO75445 5202 aa3.03□□□□□ -1.92
LCA5-201ENST00000369846 MT1FP04733 61 aa3.02□□□□□ -1.93
LCA5-201ENST00000369846 SPRR2EP22531 72 aa3.02□□□□□ -1.93
LCA5-201ENST00000369846 SPRR2BP35325 72 aa3.02□□□□□ -1.93
LCA5-201ENST00000369846 SPRR2AP35326 72 aa3.02□□□□□ -1.93
LCA5-201ENST00000369846 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
LCA5-201ENST00000369846 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
LCA5-201ENST00000369846 LCE2DQ5TA82 110 aaPredicted RBP2.96□□□□□ -1.94
LCA5-201ENST00000369846 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
LCA5-201ENST00000369846 MT1GP13640 62 aa2.93□□□□□ -1.94
LCA5-201ENST00000369846 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
LCA5-201ENST00000369846 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
LCA5-201ENST00000369846 SPRR2DP22532 72 aa2.92□□□□□ -1.94
LCA5-201ENST00000369846 MT1XP80297 61 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms