RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 DNAH8Q96JB1 4490 aa2.92□□□□□ -1.94
UBE3D-202ENST00000369746 HTN1P15515 57 aa2.92□□□□□ -1.94
UBE3D-202ENST00000369746 PCOTHQ58A44 107 aa2.92□□□□□ -1.94
UBE3D-202ENST00000369746 CRCT1Q9UGL9 99 aa2.92□□□□□ -1.94
UBE3D-202ENST00000369746 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
UBE3D-202ENST00000369746 FAM168BA1KXE4 195 aa2.91□□□□□ -1.94
UBE3D-202ENST00000369746 HERC1Q15751 4861 aa2.91□□□□□ -1.94
UBE3D-202ENST00000369746 MT1HL1P0DM35 61 aa2.91□□□□□ -1.94
UBE3D-202ENST00000369746 IGFL1Q6UW32 110 aa2.9□□□□□ -1.95
UBE3D-202ENST00000369746 DNAH5Q8TE73 4624 aa2.9□□□□□ -1.95
UBE3D-202ENST00000369746 KRTAP10-2P60368 255 aa2.9□□□□□ -1.95
UBE3D-202ENST00000369746 Q96NJ1 140 aa2.9□□□□□ -1.95
UBE3D-202ENST00000369746 TNXBP22105 4242 aa2.9□□□□□ -1.95
UBE3D-202ENST00000369746 R4GN34 69 aa2.89□□□□□ -1.95
UBE3D-202ENST00000369746 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
UBE3D-202ENST00000369746 DEFB105AQ8NG35 78 aa2.88□□□□□ -1.95
UBE3D-202ENST00000369746 DMBT1Q9UGM3 2413 aaPredicted RBP2.88□□□□□ -1.95
UBE3D-202ENST00000369746 SPRR1BP22528 89 aa2.88□□□□□ -1.95
UBE3D-202ENST00000369746 LELP1Q5T871 98 aa2.88□□□□□ -1.95
UBE3D-202ENST00000369746 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
UBE3D-202ENST00000369746 KRTAP3-1Q9BYR8 98 aa2.87□□□□□ -1.95
UBE3D-202ENST00000369746 NOP10Q9NPE3 64 aaKnown RBP2.87□□□□□ -1.95
UBE3D-202ENST00000369746 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
UBE3D-202ENST00000369746 KRTAP11-1Q8IUC1 163 aa2.86□□□□□ -1.95
UBE3D-202ENST00000369746 C14orf177Q52M58 125 aa2.86□□□□□ -1.95
UBE3D-202ENST00000369746 PRO0255Q9UI72 69 aa2.86□□□□□ -1.95
UBE3D-202ENST00000369746 A0A0G2JQZ4 141 aa2.85□□□□□ -1.95
UBE3D-202ENST00000369746 RPL37AP61513 92 aaKnown RBP2.85□□□□□ -1.95
UBE3D-202ENST00000369746 MRPL34Q9BQ48 92 aaKnown RBP2.85□□□□□ -1.95
UBE3D-202ENST00000369746 KRTAP10-8P60410 259 aa2.84□□□□□ -1.95
UBE3D-202ENST00000369746 CRIPTQ9P021 101 aa2.84□□□□□ -1.95
UBE3D-202ENST00000369746 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
UBE3D-202ENST00000369746 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
UBE3D-202ENST00000369746 SPACA4Q8TDM5 124 aa2.83□□□□□ -1.96
UBE3D-202ENST00000369746 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
UBE3D-202ENST00000369746 TPRXLQ17RH7 258 aa2.81□□□□□ -1.96
UBE3D-202ENST00000369746 A0A1W2PNN7 141 aa2.81□□□□□ -1.96
UBE3D-202ENST00000369746 KRTAP19-1Q8IUB9 90 aa2.8□□□□□ -1.96
UBE3D-202ENST00000369746 SPINK6Q6UWN8 80 aa2.8□□□□□ -1.96
UBE3D-202ENST00000369746 LINC01556Q5JQF7 62 aa2.79□□□□□ -1.96
UBE3D-202ENST00000369746 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
UBE3D-202ENST00000369746 COX6B2Q6YFQ2 88 aa2.79□□□□□ -1.96
UBE3D-202ENST00000369746 SRRM2Q9UQ35 2752 aaKnown RBP2.79□□□□□ -1.96
UBE3D-202ENST00000369746 PSORS1C2Q9UIG4 136 aa2.78□□□□□ -1.96
UBE3D-202ENST00000369746 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
UBE3D-202ENST00000369746 H0YAA0 97 aa2.78□□□□□ -1.96
UBE3D-202ENST00000369746 KRTAP1-5Q9BYS1 174 aa2.78□□□□□ -1.96
UBE3D-202ENST00000369746 IGKV2-30P06310 120 aa2.77□□□□□ -1.97
UBE3D-202ENST00000369746 RNF213Q63HN8 5207 aa2.76□□□□□ -1.97
UBE3D-202ENST00000369746 IGKV2D-30A0A075B6S6 120 aa2.75□□□□□ -1.97
UBE3D-202ENST00000369746 A0A096LPF7 62 aa2.74□□□□□ -1.97
UBE3D-202ENST00000369746 H1FX-AS1Q4G0G2 97 aa2.73□□□□□ -1.97
UBE3D-202ENST00000369746 SMR3BP02814 79 aaPredicted RBP2.72□□□□□ -1.97
UBE3D-202ENST00000369746 DEFB130BP0DP73 79 aa2.71□□□□□ -1.98
UBE3D-202ENST00000369746 DEFB130AP0DP74 79 aa2.71□□□□□ -1.98
UBE3D-202ENST00000369746 KRTAP7-1Q8IUC3 87 aa2.7□□□□□ -1.98
UBE3D-202ENST00000369746 DEFB4AO15263 64 aa2.7□□□□□ -1.98
UBE3D-202ENST00000369746 FLG2Q5D862 2391 aaPredicted RBP2.69□□□□□ -1.98
UBE3D-202ENST00000369746 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
UBE3D-202ENST00000369746 HTN3P15516 51 aa2.64□□□□□ -1.99
UBE3D-202ENST00000369746 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
UBE3D-202ENST00000369746 PRLHP81277 87 aa2.63□□□□□ -1.99
UBE3D-202ENST00000369746 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
UBE3D-202ENST00000369746 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
UBE3D-202ENST00000369746 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
UBE3D-202ENST00000369746 PLAC4Q8WY50 150 aa2.62□□□□□ -1.99
UBE3D-202ENST00000369746 MUC2Q02817 5179 aa2.61□□□□□ -1.99
UBE3D-202ENST00000369746 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
UBE3D-202ENST00000369746 RPS29P62273 56 aaKnown RBP2.56□□□□□ -2
UBE3D-202ENST00000369746 INE1O15225 51 aa2.55□□□□□ -2
UBE3D-202ENST00000369746 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
UBE3D-202ENST00000369746 A0A096LNI7 61 aa2.54□□□□□ -2
UBE3D-202ENST00000369746 SPINK1P00995 79 aa2.53□□□□□ -2
UBE3D-202ENST00000369746 KRTAP10-6P60371 365 aaPredicted RBP2.53□□□□□ -2
UBE3D-202ENST00000369746 LRP2P98164 4655 aa2.51□□□□□ -2.01
UBE3D-202ENST00000369746 S4R3F8 94 aa2.5□□□□□ -2.01
UBE3D-202ENST00000369746 KRTAP1-4P0C5Y4 121 aa2.49□□□□□ -2.01
UBE3D-202ENST00000369746 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
UBE3D-202ENST00000369746 MT1HP80294 61 aa2.48□□□□□ -2.01
UBE3D-202ENST00000369746 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
UBE3D-202ENST00000369746 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
UBE3D-202ENST00000369746 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
UBE3D-202ENST00000369746 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
UBE3D-202ENST00000369746 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
UBE3D-202ENST00000369746 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
UBE3D-202ENST00000369746 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
UBE3D-202ENST00000369746 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
UBE3D-202ENST00000369746 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
UBE3D-202ENST00000369746 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
UBE3D-202ENST00000369746 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
UBE3D-202ENST00000369746 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.03
UBE3D-202ENST00000369746 M0QZ58 72 aa2.4□□□□□ -2.03
UBE3D-202ENST00000369746 A0A0D9SG42 100 aa2.37□□□□□ -2.03
UBE3D-202ENST00000369746 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
UBE3D-202ENST00000369746 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.03
UBE3D-202ENST00000369746 KRTAP4-1Q9BYQ7 146 aa2.32□□□□□ -2.04
UBE3D-202ENST00000369746 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
UBE3D-202ENST00000369746 KRTAP2-1Q9BYU5 128 aa2.3□□□□□ -2.04
UBE3D-202ENST00000369746 NEBP20929 6669 aa2.3□□□□□ -2.04
UBE3D-202ENST00000369746 USH2AO75445 5202 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms