RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
SHOC2-202ENST00000369452 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
SHOC2-202ENST00000369452 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
SHOC2-202ENST00000369452 LCA10Q71F78 164 aa6.6□□□□□ -1.35
SHOC2-202ENST00000369452 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
SHOC2-202ENST00000369452 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
SHOC2-202ENST00000369452 J3QL48 77 aa6.57□□□□□ -1.36
SHOC2-202ENST00000369452 V9GYY9 64 aa6.54□□□□□ -1.36
SHOC2-202ENST00000369452 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
SHOC2-202ENST00000369452 PRO0628Q9UI54 55 aa6.47□□□□□ -1.37
SHOC2-202ENST00000369452 A0A1B0GU69 56 aa6.47□□□□□ -1.37
SHOC2-202ENST00000369452 A6NED7 52 aa6.46□□□□□ -1.38
SHOC2-202ENST00000369452 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
SHOC2-202ENST00000369452 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
SHOC2-202ENST00000369452 SVIPQ8NHG7 77 aa6.4□□□□□ -1.39
SHOC2-202ENST00000369452 H0YAA0 97 aa6.39□□□□□ -1.39
SHOC2-202ENST00000369452 S4R3F8 94 aa6.39□□□□□ -1.39
SHOC2-202ENST00000369452 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
SHOC2-202ENST00000369452 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
SHOC2-202ENST00000369452 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
SHOC2-202ENST00000369452 P0C880 135 aa6.35□□□□□ -1.39
SHOC2-202ENST00000369452 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
SHOC2-202ENST00000369452 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
SHOC2-202ENST00000369452 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
SHOC2-202ENST00000369452 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
SHOC2-202ENST00000369452 RBM12B-AS1Q9P1G2 102 aa6.26□□□□□ -1.41
SHOC2-202ENST00000369452 UQCR11O14957 56 aa6.26□□□□□ -1.41
SHOC2-202ENST00000369452 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
SHOC2-202ENST00000369452 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
SHOC2-202ENST00000369452 A6NN06 94 aa6.25□□□□□ -1.41
SHOC2-202ENST00000369452 A0A1B0GU33 70 aa6.25□□□□□ -1.41
SHOC2-202ENST00000369452 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
SHOC2-202ENST00000369452 SEC61GP60059 68 aa6.19□□□□□ -1.42
SHOC2-202ENST00000369452 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
SHOC2-202ENST00000369452 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
SHOC2-202ENST00000369452 A0A0D9SG42 100 aa6.1□□□□□ -1.43
SHOC2-202ENST00000369452 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
SHOC2-202ENST00000369452 MT1HP80294 61 aa6.02□□□□□ -1.45
SHOC2-202ENST00000369452 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
SHOC2-202ENST00000369452 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
SHOC2-202ENST00000369452 KTN1-AS1Q86SY8 53 aa5.96□□□□□ -1.46
SHOC2-202ENST00000369452 M0QZ58 72 aa5.93□□□□□ -1.46
SHOC2-202ENST00000369452 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
SHOC2-202ENST00000369452 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
SHOC2-202ENST00000369452 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
SHOC2-202ENST00000369452 R4GN34 69 aa5.87□□□□□ -1.47
SHOC2-202ENST00000369452 SPINT4Q6UDR6 99 aa5.86□□□□□ -1.47
SHOC2-202ENST00000369452 MT1FP04733 61 aa5.85□□□□□ -1.47
SHOC2-202ENST00000369452 USH2AO75445 5202 aa5.82□□□□□ -1.48
SHOC2-202ENST00000369452 MT2AP02795 61 aa5.82□□□□□ -1.48
SHOC2-202ENST00000369452 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
SHOC2-202ENST00000369452 M0R2T5 61 aa5.77□□□□□ -1.49
SHOC2-202ENST00000369452 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
SHOC2-202ENST00000369452 ROMO1P60602 79 aa5.71□□□□□ -1.49
SHOC2-202ENST00000369452 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
SHOC2-202ENST00000369452 K7ERS5 55 aa5.67□□□□□ -1.5
SHOC2-202ENST00000369452 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
SHOC2-202ENST00000369452 KRTAP10-10P60014 251 aa5.65□□□□□ -1.5
SHOC2-202ENST00000369452 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
SHOC2-202ENST00000369452 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
SHOC2-202ENST00000369452 MT1BP07438 61 aa5.57□□□□□ -1.52
SHOC2-202ENST00000369452 LCE2BO14633 110 aa5.53□□□□□ -1.52
SHOC2-202ENST00000369452 KMT2DO14686 5537 aa5.52□□□□□ -1.53
SHOC2-202ENST00000369452 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
SHOC2-202ENST00000369452 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
SHOC2-202ENST00000369452 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
SHOC2-202ENST00000369452 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
SHOC2-202ENST00000369452 MT1XP80297 61 aa5.43□□□□□ -1.54
SHOC2-202ENST00000369452 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
SHOC2-202ENST00000369452 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
SHOC2-202ENST00000369452 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
SHOC2-202ENST00000369452 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
SHOC2-202ENST00000369452 TNP1P09430 55 aa5.21□□□□□ -1.58
SHOC2-202ENST00000369452 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
SHOC2-202ENST00000369452 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
SHOC2-202ENST00000369452 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
SHOC2-202ENST00000369452 FCGBPQ9Y6R7 5405 aaPredicted RBP5.06□□□□□ -1.6
SHOC2-202ENST00000369452 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
SHOC2-202ENST00000369452 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
SHOC2-202ENST00000369452 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
SHOC2-202ENST00000369452 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
SHOC2-202ENST00000369452 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
SHOC2-202ENST00000369452 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
SHOC2-202ENST00000369452 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
SHOC2-202ENST00000369452 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
SHOC2-202ENST00000369452 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
SHOC2-202ENST00000369452 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
SHOC2-202ENST00000369452 LCE2DQ5TA82 110 aaPredicted RBP4.87□□□□□ -1.63
SHOC2-202ENST00000369452 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
SHOC2-202ENST00000369452 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
SHOC2-202ENST00000369452 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
SHOC2-202ENST00000369452 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
SHOC2-202ENST00000369452 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
SHOC2-202ENST00000369452 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
SHOC2-202ENST00000369452 MT1EP04732 61 aa4.69□□□□□ -1.66
SHOC2-202ENST00000369452 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
SHOC2-202ENST00000369452 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
SHOC2-202ENST00000369452 MT1LQ93083 61 aa4.63□□□□□ -1.67
SHOC2-202ENST00000369452 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
SHOC2-202ENST00000369452 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 684.6 ms