RNA–Protein interactions for RNA: ENST00000368926.5

C1orf56-201, Transcript of chromosome 1 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf56, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-201ENST00000368926 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
C1orf56-201ENST00000368926 RPS29P62273 56 aaKnown RBP9.49□□□□□ -0.89
C1orf56-201ENST00000368926 J3QL48 77 aa9.46□□□□□ -0.9
C1orf56-201ENST00000368926 CSAG1Q6PB30 78 aa9.43□□□□□ -0.9
C1orf56-201ENST00000368926 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
C1orf56-201ENST00000368926 H0YAA0 97 aa9.35□□□□□ -0.91
C1orf56-201ENST00000368926 A8MUU9 505 aa9.35□□□□□ -0.91
C1orf56-201ENST00000368926 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
C1orf56-201ENST00000368926 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
C1orf56-201ENST00000368926 A0A1B0GU33 70 aa9.32□□□□□ -0.92
C1orf56-201ENST00000368926 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
C1orf56-201ENST00000368926 KRTAP3-1Q9BYR8 98 aa9.26□□□□□ -0.93
C1orf56-201ENST00000368926 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
C1orf56-201ENST00000368926 HERC1Q15751 4861 aa9.24□□□□□ -0.93
C1orf56-201ENST00000368926 KRTAP25-1Q3LHN0 102 aa9.2□□□□□ -0.94
C1orf56-201ENST00000368926 K7ERS5 55 aa9.16□□□□□ -0.94
C1orf56-201ENST00000368926 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
C1orf56-201ENST00000368926 HMCN2Q8NDA2 5059 aa9.06□□□□□ -0.96
C1orf56-201ENST00000368926 H3BS24 57 aa8.99□□□□□ -0.97
C1orf56-201ENST00000368926 ROMO1P60602 79 aa8.97□□□□□ -0.97
C1orf56-201ENST00000368926 LPAP08519 4548 aa8.95□□□□□ -0.98
C1orf56-201ENST00000368926 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
C1orf56-201ENST00000368926 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
C1orf56-201ENST00000368926 KRTAP10-6P60371 365 aaPredicted RBP8.89□□□□□ -0.99
C1orf56-201ENST00000368926 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
C1orf56-201ENST00000368926 LRP2P98164 4655 aa8.85□□□□□ -0.99
C1orf56-201ENST00000368926 CRIPTQ9P021 101 aa8.85□□□□□ -0.99
C1orf56-201ENST00000368926 XP32Q5T750 250 aa8.81□□□□□ -1
C1orf56-201ENST00000368926 S4R3F8 94 aa8.81□□□□□ -1
C1orf56-201ENST00000368926 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
C1orf56-201ENST00000368926 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
C1orf56-201ENST00000368926 A0A0D9SG42 100 aa8.76□□□□□ -1.01
C1orf56-201ENST00000368926 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
C1orf56-201ENST00000368926 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
C1orf56-201ENST00000368926 P0C880 135 aa8.65□□□□□ -1.02
C1orf56-201ENST00000368926 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
C1orf56-201ENST00000368926 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
C1orf56-201ENST00000368926 RNF213Q63HN8 5207 aa8.59□□□□□ -1.03
C1orf56-201ENST00000368926 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
C1orf56-201ENST00000368926 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
C1orf56-201ENST00000368926 C10orf95Q9H7T3 257 aa8.53□□□□□ -1.04
C1orf56-201ENST00000368926 KRTAP12-1P59990 96 aa8.51□□□□□ -1.05
C1orf56-201ENST00000368926 M0QZ58 72 aa8.49□□□□□ -1.05
C1orf56-201ENST00000368926 MUC2Q02817 5179 aa8.48□□□□□ -1.05
C1orf56-201ENST00000368926 KRTAP15-1Q3LI76 137 aa8.43□□□□□ -1.06
C1orf56-201ENST00000368926 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
C1orf56-201ENST00000368926 NDUFAF8A1L188 74 aa8.27□□□□□ -1.09
C1orf56-201ENST00000368926 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
C1orf56-201ENST00000368926 FAT4Q6V0I7 4981 aa8.19□□□□□ -1.1
C1orf56-201ENST00000368926 R4GN34 69 aa8.17□□□□□ -1.1
C1orf56-201ENST00000368926 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
C1orf56-201ENST00000368926 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
C1orf56-201ENST00000368926 MT1HP80294 61 aa8.07□□□□□ -1.12
C1orf56-201ENST00000368926 PLAC4Q8WY50 150 aa7.96□□□□□ -1.13
C1orf56-201ENST00000368926 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
C1orf56-201ENST00000368926 M0R2T5 61 aa7.91□□□□□ -1.14
C1orf56-201ENST00000368926 PP632Q6XCG6 107 aa7.9□□□□□ -1.14
C1orf56-201ENST00000368926 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
C1orf56-201ENST00000368926 KRTAP9-8Q9BYQ0 159 aa7.71□□□□□ -1.17
C1orf56-201ENST00000368926 LUZP6Q538Z0 58 aa7.7□□□□□ -1.18
C1orf56-201ENST00000368926 MT2AP02795 61 aa7.64□□□□□ -1.19
C1orf56-201ENST00000368926 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
C1orf56-201ENST00000368926 MT1FP04733 61 aa7.59□□□□□ -1.19
C1orf56-201ENST00000368926 TNP1P09430 55 aa7.56□□□□□ -1.2
C1orf56-201ENST00000368926 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
C1orf56-201ENST00000368926 A0A0A0MQY5 61 aa7.49□□□□□ -1.21
C1orf56-201ENST00000368926 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
C1orf56-201ENST00000368926 KRTAP9-3Q9BYQ3 159 aa7.45□□□□□ -1.22
C1orf56-201ENST00000368926 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
C1orf56-201ENST00000368926 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.22
C1orf56-201ENST00000368926 LCE2BO14633 110 aa7.32□□□□□ -1.24
C1orf56-201ENST00000368926 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
C1orf56-201ENST00000368926 SPRR2GQ9BYE4 73 aa7.26□□□□□ -1.25
C1orf56-201ENST00000368926 USH2AO75445 5202 aa7.23□□□□□ -1.25
C1orf56-201ENST00000368926 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
C1orf56-201ENST00000368926 KRTAP19-8Q3LI54 63 aa7.15□□□□□ -1.27
C1orf56-201ENST00000368926 MT1BP07438 61 aa7.1□□□□□ -1.27
C1orf56-201ENST00000368926 CRCT1Q9UGL9 99 aa7.1□□□□□ -1.27
C1orf56-201ENST00000368926 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
C1orf56-201ENST00000368926 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
C1orf56-201ENST00000368926 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.29
C1orf56-201ENST00000368926 KRTAP19-6Q3LI70 58 aa6.97□□□□□ -1.29
C1orf56-201ENST00000368926 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
C1orf56-201ENST00000368926 FCGBPQ9Y6R7 5405 aaPredicted RBP6.85□□□□□ -1.31
C1orf56-201ENST00000368926 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
C1orf56-201ENST00000368926 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
C1orf56-201ENST00000368926 INE1O15225 51 aa6.78□□□□□ -1.32
C1orf56-201ENST00000368926 MT1XP80297 61 aa6.77□□□□□ -1.33
C1orf56-201ENST00000368926 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
C1orf56-201ENST00000368926 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
C1orf56-201ENST00000368926 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
C1orf56-201ENST00000368926 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
C1orf56-201ENST00000368926 MACF1Q9UPN3 7388 aaKnown RBP6.55□□□□□ -1.36
C1orf56-201ENST00000368926 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
C1orf56-201ENST00000368926 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
C1orf56-201ENST00000368926 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
C1orf56-201ENST00000368926 KMT2DO14686 5537 aa6.35□□□□□ -1.39
C1orf56-201ENST00000368926 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
C1orf56-201ENST00000368926 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
C1orf56-201ENST00000368926 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms