RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 RYR3Q15413 4870 aa2.53□□□□□ -2
RC3H1-202ENST00000367694 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
RC3H1-202ENST00000367694 CSMD3Q7Z407 3707 aa2.52□□□□□ -2.01
RC3H1-202ENST00000367694 LYSTQ99698 3801 aa2.52□□□□□ -2.01
RC3H1-202ENST00000367694 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
RC3H1-202ENST00000367694 KRTAP13-1Q8IUC0 172 aa2.51□□□□□ -2.01
RC3H1-202ENST00000367694 KRTAP9-2Q9BYQ4 174 aa2.51□□□□□ -2.01
RC3H1-202ENST00000367694 APLNQ9ULZ1 77 aa2.49□□□□□ -2.01
RC3H1-202ENST00000367694 KIAA1109Q2LD37 5005 aa2.49□□□□□ -2.01
RC3H1-202ENST00000367694 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
RC3H1-202ENST00000367694 RYR2Q92736 4967 aa2.48□□□□□ -2.01
RC3H1-202ENST00000367694 HERC2O95714 4834 aa2.47□□□□□ -2.01
RC3H1-202ENST00000367694 PRKDCP78527 4128 aaKnown RBP2.47□□□□□ -2.01
RC3H1-202ENST00000367694 HECTD4Q9Y4D8 3996 aa2.46□□□□□ -2.02
RC3H1-202ENST00000367694 DNAH11Q96DT5 4516 aa2.46□□□□□ -2.02
RC3H1-202ENST00000367694 SPINK1P00995 79 aa2.45□□□□□ -2.02
RC3H1-202ENST00000367694 KRTAP10-6P60371 365 aaPredicted RBP2.45□□□□□ -2.02
RC3H1-202ENST00000367694 KRTAP13-4Q3LI77 160 aa2.44□□□□□ -2.02
RC3H1-202ENST00000367694 KRTAP3-1Q9BYR8 98 aa2.44□□□□□ -2.02
RC3H1-202ENST00000367694 DNAH9Q9NYC9 4486 aa2.43□□□□□ -2.02
RC3H1-202ENST00000367694 S4R3F8 94 aa2.43□□□□□ -2.02
RC3H1-202ENST00000367694 DNAH8Q96JB1 4490 aa2.42□□□□□ -2.02
RC3H1-202ENST00000367694 DNAH10Q8IVF4 4471 aa2.4□□□□□ -2.03
RC3H1-202ENST00000367694 FAT2Q9NYQ8 4349 aa2.4□□□□□ -2.03
RC3H1-202ENST00000367694 DNAH17Q9UFH2 4485 aa2.39□□□□□ -2.03
RC3H1-202ENST00000367694 KRTAP4-8Q9BYQ9 185 aa2.39□□□□□ -2.03
RC3H1-202ENST00000367694 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
RC3H1-202ENST00000367694 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
RC3H1-202ENST00000367694 HERC1Q15751 4861 aa2.37□□□□□ -2.03
RC3H1-202ENST00000367694 KRTAP13-2Q52LG2 175 aa2.36□□□□□ -2.03
RC3H1-202ENST00000367694 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
RC3H1-202ENST00000367694 SACSQ9NZJ4 4579 aa2.36□□□□□ -2.03
RC3H1-202ENST00000367694 A0A1B0GVY2 172 aa2.35□□□□□ -2.03
RC3H1-202ENST00000367694 M0R2T5 61 aa2.34□□□□□ -2.03
RC3H1-202ENST00000367694 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
RC3H1-202ENST00000367694 KMT2AQ03164 3969 aa2.34□□□□□ -2.03
RC3H1-202ENST00000367694 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.03
RC3H1-202ENST00000367694 KRTAP10-2P60368 255 aa2.34□□□□□ -2.03
RC3H1-202ENST00000367694 PKHD1L1Q86WI1 4243 aa2.34□□□□□ -2.04
RC3H1-202ENST00000367694 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
RC3H1-202ENST00000367694 KRTAP9-8Q9BYQ0 159 aa2.33□□□□□ -2.04
RC3H1-202ENST00000367694 DNAH2Q9P225 4427 aa2.33□□□□□ -2.04
RC3H1-202ENST00000367694 ABCA13Q86UQ4 5058 aa2.33□□□□□ -2.04
RC3H1-202ENST00000367694 C9orf92A6NGG3 77 aa2.31□□□□□ -2.04
RC3H1-202ENST00000367694 KRTAP9-7A8MTY7 169 aa2.31□□□□□ -2.04
RC3H1-202ENST00000367694 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
RC3H1-202ENST00000367694 KRTAP1-4P0C5Y4 121 aa2.3□□□□□ -2.04
RC3H1-202ENST00000367694 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
RC3H1-202ENST00000367694 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
RC3H1-202ENST00000367694 PLECQ15149 4684 aaKnown RBP2.3□□□□□ -2.04
RC3H1-202ENST00000367694 PKHD1P08F94 4074 aa2.29□□□□□ -2.04
RC3H1-202ENST00000367694 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
RC3H1-202ENST00000367694 KRTAP4-8A0A0G2JLE6 195 aa2.27□□□□□ -2.05
RC3H1-202ENST00000367694 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
RC3H1-202ENST00000367694 PKD1P98161 4303 aa2.27□□□□□ -2.05
RC3H1-202ENST00000367694 A0A0D9SG42 100 aa2.26□□□□□ -2.05
RC3H1-202ENST00000367694 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
RC3H1-202ENST00000367694 RPS29P62273 56 aaKnown RBP2.25□□□□□ -2.05
RC3H1-202ENST00000367694 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.21□□□□□ -2.06
RC3H1-202ENST00000367694 M0QZ58 72 aa2.21□□□□□ -2.06
RC3H1-202ENST00000367694 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
RC3H1-202ENST00000367694 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
RC3H1-202ENST00000367694 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
RC3H1-202ENST00000367694 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
RC3H1-202ENST00000367694 FAT3Q8TDW7 4589 aa2.18□□□□□ -2.06
RC3H1-202ENST00000367694 LRP1BQ9NZR2 4599 aa2.16□□□□□ -2.06
RC3H1-202ENST00000367694 DNAH5Q8TE73 4624 aa2.16□□□□□ -2.06
RC3H1-202ENST00000367694 HSPG2P98160 4391 aa2.16□□□□□ -2.06
RC3H1-202ENST00000367694 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
RC3H1-202ENST00000367694 LRP2P98164 4655 aa2.14□□□□□ -2.07
RC3H1-202ENST00000367694 KRTAP4-9Q9BYQ8 210 aa2.13□□□□□ -2.07
RC3H1-202ENST00000367694 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
RC3H1-202ENST00000367694 APOBP04114 4563 aaKnown RBP2.13□□□□□ -2.07
RC3H1-202ENST00000367694 TNXBP22105 4242 aa2.13□□□□□ -2.07
RC3H1-202ENST00000367694 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
RC3H1-202ENST00000367694 FAT1Q14517 4588 aa2.13□□□□□ -2.07
RC3H1-202ENST00000367694 MUC2Q02817 5179 aa2.11□□□□□ -2.07
RC3H1-202ENST00000367694 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
RC3H1-202ENST00000367694 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
RC3H1-202ENST00000367694 KRTAP10-4P60372 401 aaPredicted RBP2.08□□□□□ -2.08
RC3H1-202ENST00000367694 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
RC3H1-202ENST00000367694 KRTAP19-1Q8IUB9 90 aa2.07□□□□□ -2.08
RC3H1-202ENST00000367694 MT1HL1P0DM35 61 aa2.05□□□□□ -2.08
RC3H1-202ENST00000367694 LRP1Q07954 4544 aaKnown RBP2.05□□□□□ -2.08
RC3H1-202ENST00000367694 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
RC3H1-202ENST00000367694 LCE5AQ5TCM9 118 aa2.03□□□□□ -2.08
RC3H1-202ENST00000367694 HMCN2Q8NDA2 5059 aa2.03□□□□□ -2.08
RC3H1-202ENST00000367694 LCE3BQ5TA77 95 aa2.02□□□□□ -2.09
RC3H1-202ENST00000367694 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
RC3H1-202ENST00000367694 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
RC3H1-202ENST00000367694 NEBP20929 6669 aa2□□□□□ -2.09
RC3H1-202ENST00000367694 KMT2DO14686 5537 aa2□□□□□ -2.09
RC3H1-202ENST00000367694 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
RC3H1-202ENST00000367694 LCE1DQ5T752 114 aa1.97□□□□□ -2.09
RC3H1-202ENST00000367694 KRTAP10-12P60413 245 aa1.94□□□□□ -2.1
RC3H1-202ENST00000367694 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
RC3H1-202ENST00000367694 KRTAP19-4Q3LI73 84 aa1.93□□□□□ -2.1
RC3H1-202ENST00000367694 KRTAP9-3Q9BYQ3 159 aa1.93□□□□□ -2.1
RC3H1-202ENST00000367694 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
RC3H1-202ENST00000367694 TNP1P09430 55 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms