RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 PKHD1P08F94 4074 aa5.08□□□□□ -1.6
GTF3C2-202ENST00000359541 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
GTF3C2-202ENST00000359541 A0A1B0GU33 70 aa5.07□□□□□ -1.6
GTF3C2-202ENST00000359541 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
GTF3C2-202ENST00000359541 M0R2T5 61 aa5.05□□□□□ -1.6
GTF3C2-202ENST00000359541 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
GTF3C2-202ENST00000359541 DYNC1H1Q14204 4646 aaKnown RBP5.01□□□□□ -1.61
GTF3C2-202ENST00000359541 KRTAP10-8P60410 259 aa4.97□□□□□ -1.61
GTF3C2-202ENST00000359541 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
GTF3C2-202ENST00000359541 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
GTF3C2-202ENST00000359541 P0C880 135 aa4.94□□□□□ -1.62
GTF3C2-202ENST00000359541 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
GTF3C2-202ENST00000359541 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
GTF3C2-202ENST00000359541 APOBP04114 4563 aaKnown RBP4.92□□□□□ -1.62
GTF3C2-202ENST00000359541 FAT1Q14517 4588 aa4.92□□□□□ -1.62
GTF3C2-202ENST00000359541 TNXBP22105 4242 aa4.91□□□□□ -1.62
GTF3C2-202ENST00000359541 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
GTF3C2-202ENST00000359541 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
GTF3C2-202ENST00000359541 XP32Q5T750 250 aa4.88□□□□□ -1.63
GTF3C2-202ENST00000359541 S4R3F8 94 aa4.86□□□□□ -1.63
GTF3C2-202ENST00000359541 HSPG2P98160 4391 aa4.83□□□□□ -1.64
GTF3C2-202ENST00000359541 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
GTF3C2-202ENST00000359541 H0YAA0 97 aa4.81□□□□□ -1.64
GTF3C2-202ENST00000359541 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
GTF3C2-202ENST00000359541 HERC2O95714 4834 aa4.79□□□□□ -1.64
GTF3C2-202ENST00000359541 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
GTF3C2-202ENST00000359541 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
GTF3C2-202ENST00000359541 R4GN34 69 aa4.78□□□□□ -1.64
GTF3C2-202ENST00000359541 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
GTF3C2-202ENST00000359541 RYR1P21817 5038 aa4.77□□□□□ -1.65
GTF3C2-202ENST00000359541 LCE2CQ5TA81 110 aa4.75□□□□□ -1.65
GTF3C2-202ENST00000359541 FAT3Q8TDW7 4589 aa4.74□□□□□ -1.65
GTF3C2-202ENST00000359541 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
GTF3C2-202ENST00000359541 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
GTF3C2-202ENST00000359541 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
GTF3C2-202ENST00000359541 MYCBP2O75592 4640 aa4.71□□□□□ -1.65
GTF3C2-202ENST00000359541 M0QZ58 72 aa4.71□□□□□ -1.66
GTF3C2-202ENST00000359541 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
GTF3C2-202ENST00000359541 KRTAP17-1Q9BYP8 105 aa4.68□□□□□ -1.66
GTF3C2-202ENST00000359541 LPAP08519 4548 aa4.68□□□□□ -1.66
GTF3C2-202ENST00000359541 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
GTF3C2-202ENST00000359541 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
GTF3C2-202ENST00000359541 LCE2BO14633 110 aa4.61□□□□□ -1.67
GTF3C2-202ENST00000359541 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
GTF3C2-202ENST00000359541 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
GTF3C2-202ENST00000359541 HERC1Q15751 4861 aa4.52□□□□□ -1.69
GTF3C2-202ENST00000359541 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
GTF3C2-202ENST00000359541 KRTAP12-2P59991 146 aa4.47□□□□□ -1.69
GTF3C2-202ENST00000359541 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
GTF3C2-202ENST00000359541 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
GTF3C2-202ENST00000359541 LRP2P98164 4655 aa4.43□□□□□ -1.7
GTF3C2-202ENST00000359541 PP632Q6XCG6 107 aa4.4□□□□□ -1.7
GTF3C2-202ENST00000359541 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
GTF3C2-202ENST00000359541 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
GTF3C2-202ENST00000359541 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
GTF3C2-202ENST00000359541 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.71
GTF3C2-202ENST00000359541 TNP1P09430 55 aa4.3□□□□□ -1.72
GTF3C2-202ENST00000359541 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
GTF3C2-202ENST00000359541 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
GTF3C2-202ENST00000359541 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
GTF3C2-202ENST00000359541 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
GTF3C2-202ENST00000359541 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
GTF3C2-202ENST00000359541 MUC2Q02817 5179 aa4.08□□□□□ -1.76
GTF3C2-202ENST00000359541 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
GTF3C2-202ENST00000359541 MT1HP80294 61 aa4.01□□□□□ -1.77
GTF3C2-202ENST00000359541 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
GTF3C2-202ENST00000359541 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
GTF3C2-202ENST00000359541 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
GTF3C2-202ENST00000359541 MT2AP02795 61 aa3.93□□□□□ -1.78
GTF3C2-202ENST00000359541 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
GTF3C2-202ENST00000359541 MT1FP04733 61 aa3.91□□□□□ -1.78
GTF3C2-202ENST00000359541 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
GTF3C2-202ENST00000359541 KRTAP19-8Q3LI54 63 aa3.86□□□□□ -1.79
GTF3C2-202ENST00000359541 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
GTF3C2-202ENST00000359541 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
GTF3C2-202ENST00000359541 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
GTF3C2-202ENST00000359541 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
GTF3C2-202ENST00000359541 MT1BP07438 61 aa3.76□□□□□ -1.81
GTF3C2-202ENST00000359541 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
GTF3C2-202ENST00000359541 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
GTF3C2-202ENST00000359541 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
GTF3C2-202ENST00000359541 MT1XP80297 61 aa3.72□□□□□ -1.81
GTF3C2-202ENST00000359541 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
GTF3C2-202ENST00000359541 INE1O15225 51 aa3.7□□□□□ -1.82
GTF3C2-202ENST00000359541 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
GTF3C2-202ENST00000359541 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
GTF3C2-202ENST00000359541 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
GTF3C2-202ENST00000359541 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
GTF3C2-202ENST00000359541 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
GTF3C2-202ENST00000359541 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
GTF3C2-202ENST00000359541 USH2AO75445 5202 aa3.43□□□□□ -1.86
GTF3C2-202ENST00000359541 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
GTF3C2-202ENST00000359541 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
GTF3C2-202ENST00000359541 SSPOA2VEC9 5147 aa3.4□□□□□ -1.86
GTF3C2-202ENST00000359541 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
GTF3C2-202ENST00000359541 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
GTF3C2-202ENST00000359541 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
GTF3C2-202ENST00000359541 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
GTF3C2-202ENST00000359541 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
GTF3C2-202ENST00000359541 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms