RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
SNX11-201ENST00000359238 BIRC6Q9NR09 4857 aa10.16□□□□□ -0.78
SNX11-201ENST00000359238 A8MUU9 505 aa10.15□□□□□ -0.78
SNX11-201ENST00000359238 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
SNX11-201ENST00000359238 KRTAP25-1Q3LHN0 102 aa10.13□□□□□ -0.79
SNX11-201ENST00000359238 C9orf92A6NGG3 77 aa10.12□□□□□ -0.79
SNX11-201ENST00000359238 ABCA13Q86UQ4 5058 aa10.11□□□□□ -0.79
SNX11-201ENST00000359238 H0YAA0 97 aa10.09□□□□□ -0.79
SNX11-201ENST00000359238 HERC2O95714 4834 aa10.06□□□□□ -0.8
SNX11-201ENST00000359238 ROMO1P60602 79 aa10.04□□□□□ -0.8
SNX11-201ENST00000359238 A0A1B0GU33 70 aa9.96□□□□□ -0.81
SNX11-201ENST00000359238 LPAP08519 4548 aa9.92□□□□□ -0.82
SNX11-201ENST00000359238 H1FX-AS1Q4G0G2 97 aa9.91□□□□□ -0.82
SNX11-201ENST00000359238 C20orf166-AS1Q96NR2 134 aa9.89□□□□□ -0.83
SNX11-201ENST00000359238 LRP2P98164 4655 aa9.85□□□□□ -0.83
SNX11-201ENST00000359238 J3QL48 77 aa9.83□□□□□ -0.84
SNX11-201ENST00000359238 K7ERS5 55 aa9.81□□□□□ -0.84
SNX11-201ENST00000359238 KRTAP3-1Q9BYR8 98 aa9.77□□□□□ -0.85
SNX11-201ENST00000359238 PCLOQ9Y6V0 5065 aa9.75□□□□□ -0.85
SNX11-201ENST00000359238 XP32Q5T750 250 aa9.74□□□□□ -0.85
SNX11-201ENST00000359238 P0C880 135 aa9.74□□□□□ -0.85
SNX11-201ENST00000359238 CRIPTQ9P021 101 aa9.73□□□□□ -0.85
SNX11-201ENST00000359238 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
SNX11-201ENST00000359238 RPL37P61927 97 aaKnown RBP9.66□□□□□ -0.86
SNX11-201ENST00000359238 TPRXLQ17RH7 258 aa9.65□□□□□ -0.86
SNX11-201ENST00000359238 HERC1Q15751 4861 aa9.6□□□□□ -0.87
SNX11-201ENST00000359238 SPINT4Q6UDR6 99 aa9.5□□□□□ -0.89
SNX11-201ENST00000359238 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
SNX11-201ENST00000359238 MUC17Q685J3 4493 aa9.41□□□□□ -0.9
SNX11-201ENST00000359238 KRTAP13-4Q3LI77 160 aa9.4□□□□□ -0.9
SNX11-201ENST00000359238 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.91
SNX11-201ENST00000359238 KRTAP15-1Q3LI76 137 aa9.38□□□□□ -0.91
SNX11-201ENST00000359238 MUC2Q02817 5179 aa9.37□□□□□ -0.91
SNX11-201ENST00000359238 A0A0D9SG42 100 aa9.36□□□□□ -0.91
SNX11-201ENST00000359238 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
SNX11-201ENST00000359238 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
SNX11-201ENST00000359238 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
SNX11-201ENST00000359238 NDUFAF8A1L188 74 aa9.31□□□□□ -0.92
SNX11-201ENST00000359238 SEC61BP60468 96 aaKnown RBP9.31□□□□□ -0.92
SNX11-201ENST00000359238 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
SNX11-201ENST00000359238 S4R3F8 94 aa9.22□□□□□ -0.93
SNX11-201ENST00000359238 KRTAP12-2P59991 146 aa9.15□□□□□ -0.95
SNX11-201ENST00000359238 UBR4Q5T4S7 5183 aa9.07□□□□□ -0.96
SNX11-201ENST00000359238 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
SNX11-201ENST00000359238 RNF213Q63HN8 5207 aa9.02□□□□□ -0.97
SNX11-201ENST00000359238 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
SNX11-201ENST00000359238 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
SNX11-201ENST00000359238 M0QZ58 72 aa8.89□□□□□ -0.99
SNX11-201ENST00000359238 FLGP20930 4061 aaPredicted RBP8.87□□□□□ -0.99
SNX11-201ENST00000359238 LCE2CQ5TA81 110 aa8.71□□□□□ -1.01
SNX11-201ENST00000359238 A0A0A0MQY5 61 aa8.7□□□□□ -1.02
SNX11-201ENST00000359238 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
SNX11-201ENST00000359238 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
SNX11-201ENST00000359238 LUZP6Q538Z0 58 aa8.62□□□□□ -1.03
SNX11-201ENST00000359238 MT1HP80294 61 aa8.54□□□□□ -1.04
SNX11-201ENST00000359238 R4GN34 69 aa8.51□□□□□ -1.05
SNX11-201ENST00000359238 M0R2T5 61 aa8.5□□□□□ -1.05
SNX11-201ENST00000359238 PP632Q6XCG6 107 aa8.4□□□□□ -1.06
SNX11-201ENST00000359238 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
SNX11-201ENST00000359238 MT2AP02795 61 aa8.21□□□□□ -1.09
SNX11-201ENST00000359238 MT1FP04733 61 aa8.19□□□□□ -1.1
SNX11-201ENST00000359238 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
SNX11-201ENST00000359238 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
SNX11-201ENST00000359238 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
SNX11-201ENST00000359238 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
SNX11-201ENST00000359238 SPRR5A0A1B0GTR4 108 aa8.05□□□□□ -1.12
SNX11-201ENST00000359238 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
SNX11-201ENST00000359238 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
SNX11-201ENST00000359238 TNP1P09430 55 aa7.94□□□□□ -1.14
SNX11-201ENST00000359238 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
SNX11-201ENST00000359238 USH2AO75445 5202 aa7.81□□□□□ -1.16
SNX11-201ENST00000359238 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
SNX11-201ENST00000359238 MT1BP07438 61 aa7.78□□□□□ -1.16
SNX11-201ENST00000359238 LCE2BO14633 110 aa7.73□□□□□ -1.17
SNX11-201ENST00000359238 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
SNX11-201ENST00000359238 MT1XP80297 61 aa7.57□□□□□ -1.2
SNX11-201ENST00000359238 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
SNX11-201ENST00000359238 INE1O15225 51 aa7.53□□□□□ -1.2
SNX11-201ENST00000359238 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
SNX11-201ENST00000359238 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
SNX11-201ENST00000359238 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
SNX11-201ENST00000359238 KMT2DO14686 5537 aa7.36□□□□□ -1.23
SNX11-201ENST00000359238 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
SNX11-201ENST00000359238 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
SNX11-201ENST00000359238 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
SNX11-201ENST00000359238 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
SNX11-201ENST00000359238 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
SNX11-201ENST00000359238 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.28
SNX11-201ENST00000359238 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.28
SNX11-201ENST00000359238 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
SNX11-201ENST00000359238 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
SNX11-201ENST00000359238 FCGBPQ9Y6R7 5405 aaPredicted RBP7.02□□□□□ -1.29
SNX11-201ENST00000359238 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
SNX11-201ENST00000359238 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
SNX11-201ENST00000359238 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
SNX11-201ENST00000359238 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
SNX11-201ENST00000359238 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
SNX11-201ENST00000359238 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
SNX11-201ENST00000359238 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
SNX11-201ENST00000359238 MT1EP04732 61 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms