RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 A8MUU9 505 aa6.97□□□□□ -1.29
GGPS1-202ENST00000358966 DMAC1Q96GE9 116 aa6.97□□□□□ -1.29
GGPS1-202ENST00000358966 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
GGPS1-202ENST00000358966 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.29
GGPS1-202ENST00000358966 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.3
GGPS1-202ENST00000358966 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
GGPS1-202ENST00000358966 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
GGPS1-202ENST00000358966 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
GGPS1-202ENST00000358966 HERC2O95714 4834 aa6.88□□□□□ -1.31
GGPS1-202ENST00000358966 IGKV2D-30A0A075B6S6 120 aa6.87□□□□□ -1.31
GGPS1-202ENST00000358966 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
GGPS1-202ENST00000358966 LPAP08519 4548 aa6.87□□□□□ -1.31
GGPS1-202ENST00000358966 NDUFAF8A1L188 74 aa6.85□□□□□ -1.31
GGPS1-202ENST00000358966 LRP2P98164 4655 aa6.82□□□□□ -1.32
GGPS1-202ENST00000358966 BIRC6Q9NR09 4857 aa6.82□□□□□ -1.32
GGPS1-202ENST00000358966 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
GGPS1-202ENST00000358966 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
GGPS1-202ENST00000358966 H0YAA0 97 aa6.75□□□□□ -1.33
GGPS1-202ENST00000358966 XP32Q5T750 250 aa6.71□□□□□ -1.34
GGPS1-202ENST00000358966 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.34
GGPS1-202ENST00000358966 HERC1Q15751 4861 aa6.68□□□□□ -1.34
GGPS1-202ENST00000358966 J3QL48 77 aa6.64□□□□□ -1.35
GGPS1-202ENST00000358966 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
GGPS1-202ENST00000358966 RPL37P61927 97 aaKnown RBP6.63□□□□□ -1.35
GGPS1-202ENST00000358966 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
GGPS1-202ENST00000358966 A0A1B0GU33 70 aa6.56□□□□□ -1.36
GGPS1-202ENST00000358966 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
GGPS1-202ENST00000358966 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
GGPS1-202ENST00000358966 MUC2Q02817 5179 aa6.55□□□□□ -1.36
GGPS1-202ENST00000358966 K7ERS5 55 aa6.53□□□□□ -1.36
GGPS1-202ENST00000358966 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
GGPS1-202ENST00000358966 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
GGPS1-202ENST00000358966 COX6B2Q6YFQ2 88 aa6.45□□□□□ -1.38
GGPS1-202ENST00000358966 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
GGPS1-202ENST00000358966 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
GGPS1-202ENST00000358966 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
GGPS1-202ENST00000358966 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
GGPS1-202ENST00000358966 SEC61BP60468 96 aaKnown RBP6.3□□□□□ -1.4
GGPS1-202ENST00000358966 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
GGPS1-202ENST00000358966 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
GGPS1-202ENST00000358966 S4R3F8 94 aa6.27□□□□□ -1.41
GGPS1-202ENST00000358966 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
GGPS1-202ENST00000358966 A0A0D9SG42 100 aa6.23□□□□□ -1.41
GGPS1-202ENST00000358966 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
GGPS1-202ENST00000358966 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
GGPS1-202ENST00000358966 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
GGPS1-202ENST00000358966 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
GGPS1-202ENST00000358966 FLGP20930 4061 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-202ENST00000358966 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
GGPS1-202ENST00000358966 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
GGPS1-202ENST00000358966 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
GGPS1-202ENST00000358966 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
GGPS1-202ENST00000358966 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
GGPS1-202ENST00000358966 M0QZ58 72 aa5.84□□□□□ -1.47
GGPS1-202ENST00000358966 MT1HP80294 61 aa5.83□□□□□ -1.48
GGPS1-202ENST00000358966 M0R2T5 61 aa5.83□□□□□ -1.48
GGPS1-202ENST00000358966 R4GN34 69 aa5.82□□□□□ -1.48
GGPS1-202ENST00000358966 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
GGPS1-202ENST00000358966 MT1FP04733 61 aa5.64□□□□□ -1.51
GGPS1-202ENST00000358966 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
GGPS1-202ENST00000358966 MT2AP02795 61 aa5.63□□□□□ -1.51
GGPS1-202ENST00000358966 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
GGPS1-202ENST00000358966 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
GGPS1-202ENST00000358966 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
GGPS1-202ENST00000358966 SPRR2GQ9BYE4 73 aa5.49□□□□□ -1.53
GGPS1-202ENST00000358966 USH2AO75445 5202 aa5.47□□□□□ -1.53
GGPS1-202ENST00000358966 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.54
GGPS1-202ENST00000358966 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
GGPS1-202ENST00000358966 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
GGPS1-202ENST00000358966 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
GGPS1-202ENST00000358966 INE1O15225 51 aa5.34□□□□□ -1.55
GGPS1-202ENST00000358966 MT1BP07438 61 aa5.33□□□□□ -1.56
GGPS1-202ENST00000358966 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
GGPS1-202ENST00000358966 LCE2BO14633 110 aa5.3□□□□□ -1.56
GGPS1-202ENST00000358966 KRTAP19-8Q3LI54 63 aa5.3□□□□□ -1.56
GGPS1-202ENST00000358966 MT1XP80297 61 aa5.2□□□□□ -1.58
GGPS1-202ENST00000358966 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
GGPS1-202ENST00000358966 TNP1P09430 55 aa5.16□□□□□ -1.58
GGPS1-202ENST00000358966 KMT2DO14686 5537 aa5.14□□□□□ -1.59
GGPS1-202ENST00000358966 SSPOA2VEC9 5147 aa5.09□□□□□ -1.6
GGPS1-202ENST00000358966 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
GGPS1-202ENST00000358966 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
GGPS1-202ENST00000358966 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
GGPS1-202ENST00000358966 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
GGPS1-202ENST00000358966 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
GGPS1-202ENST00000358966 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.62
GGPS1-202ENST00000358966 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.62
GGPS1-202ENST00000358966 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
GGPS1-202ENST00000358966 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
GGPS1-202ENST00000358966 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
GGPS1-202ENST00000358966 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
GGPS1-202ENST00000358966 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
GGPS1-202ENST00000358966 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
GGPS1-202ENST00000358966 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
GGPS1-202ENST00000358966 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.66
GGPS1-202ENST00000358966 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
GGPS1-202ENST00000358966 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
GGPS1-202ENST00000358966 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
GGPS1-202ENST00000358966 MT1EP04732 61 aa4.52□□□□□ -1.69
GGPS1-202ENST00000358966 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms