RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 HSPG2P98160 4391 aa4.33□□□□□ -1.72
CD46-205ENST00000358170 PKHD1L1Q86WI1 4243 aa4.33□□□□□ -1.72
CD46-205ENST00000358170 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
CD46-205ENST00000358170 RYR3Q15413 4870 aa4.31□□□□□ -1.72
CD46-205ENST00000358170 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
CD46-205ENST00000358170 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
CD46-205ENST00000358170 XP32Q5T750 250 aa4.28□□□□□ -1.72
CD46-205ENST00000358170 RYR1P21817 5038 aa4.28□□□□□ -1.73
CD46-205ENST00000358170 K7ERS5 55 aa4.26□□□□□ -1.73
CD46-205ENST00000358170 RPL37P61927 97 aaKnown RBP4.26□□□□□ -1.73
CD46-205ENST00000358170 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
CD46-205ENST00000358170 LRP2P98164 4655 aa4.24□□□□□ -1.73
CD46-205ENST00000358170 S4R3F8 94 aa4.23□□□□□ -1.73
CD46-205ENST00000358170 LPAP08519 4548 aa4.23□□□□□ -1.73
CD46-205ENST00000358170 TNXBP22105 4242 aa4.22□□□□□ -1.73
CD46-205ENST00000358170 P0C880 135 aa4.21□□□□□ -1.74
CD46-205ENST00000358170 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
CD46-205ENST00000358170 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
CD46-205ENST00000358170 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
CD46-205ENST00000358170 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
CD46-205ENST00000358170 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
CD46-205ENST00000358170 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
CD46-205ENST00000358170 KRTAP4-5Q9BYR2 181 aa4.14□□□□□ -1.75
CD46-205ENST00000358170 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
CD46-205ENST00000358170 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
CD46-205ENST00000358170 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
CD46-205ENST00000358170 KRTAP3-2Q9BYR7 98 aa4.13□□□□□ -1.75
CD46-205ENST00000358170 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
CD46-205ENST00000358170 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
CD46-205ENST00000358170 ROMO1P60602 79 aa4.1□□□□□ -1.75
CD46-205ENST00000358170 J3QL48 77 aa4.07□□□□□ -1.76
CD46-205ENST00000358170 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
CD46-205ENST00000358170 TPRXLQ17RH7 258 aa4.04□□□□□ -1.76
CD46-205ENST00000358170 M0QZ58 72 aa4.03□□□□□ -1.76
CD46-205ENST00000358170 MUC2Q02817 5179 aa4.02□□□□□ -1.77
CD46-205ENST00000358170 R4GN34 69 aa4□□□□□ -1.77
CD46-205ENST00000358170 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
CD46-205ENST00000358170 HERC2O95714 4834 aa3.98□□□□□ -1.77
CD46-205ENST00000358170 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
CD46-205ENST00000358170 H3BS24 57 aa3.95□□□□□ -1.78
CD46-205ENST00000358170 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
CD46-205ENST00000358170 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
CD46-205ENST00000358170 HERC1Q15751 4861 aa3.86□□□□□ -1.79
CD46-205ENST00000358170 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
CD46-205ENST00000358170 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
CD46-205ENST00000358170 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
CD46-205ENST00000358170 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
CD46-205ENST00000358170 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
CD46-205ENST00000358170 M0R2T5 61 aa3.75□□□□□ -1.81
CD46-205ENST00000358170 PCLOQ9Y6V0 5065 aa3.74□□□□□ -1.81
CD46-205ENST00000358170 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
CD46-205ENST00000358170 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.81
CD46-205ENST00000358170 BIRC6Q9NR09 4857 aa3.71□□□□□ -1.82
CD46-205ENST00000358170 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
CD46-205ENST00000358170 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
CD46-205ENST00000358170 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
CD46-205ENST00000358170 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.83
CD46-205ENST00000358170 TNP1P09430 55 aa3.6□□□□□ -1.83
CD46-205ENST00000358170 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
CD46-205ENST00000358170 KRTAP10-10P60014 251 aa3.58□□□□□ -1.84
CD46-205ENST00000358170 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
CD46-205ENST00000358170 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
CD46-205ENST00000358170 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
CD46-205ENST00000358170 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
CD46-205ENST00000358170 MT1HP80294 61 aa3.51□□□□□ -1.85
CD46-205ENST00000358170 KRTAP19-1Q8IUB9 90 aa3.49□□□□□ -1.85
CD46-205ENST00000358170 MT1FP04733 61 aa3.48□□□□□ -1.85
CD46-205ENST00000358170 MT2AP02795 61 aa3.46□□□□□ -1.86
CD46-205ENST00000358170 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
CD46-205ENST00000358170 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
CD46-205ENST00000358170 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
CD46-205ENST00000358170 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
CD46-205ENST00000358170 LCE2BO14633 110 aa3.4□□□□□ -1.87
CD46-205ENST00000358170 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.87
CD46-205ENST00000358170 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
CD46-205ENST00000358170 USH2AO75445 5202 aa3.39□□□□□ -1.87
CD46-205ENST00000358170 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
CD46-205ENST00000358170 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
CD46-205ENST00000358170 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
CD46-205ENST00000358170 MT1BP07438 61 aa3.31□□□□□ -1.88
CD46-205ENST00000358170 KMT2DO14686 5537 aa3.3□□□□□ -1.88
CD46-205ENST00000358170 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
CD46-205ENST00000358170 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
CD46-205ENST00000358170 MT1XP80297 61 aa3.29□□□□□ -1.88
CD46-205ENST00000358170 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
CD46-205ENST00000358170 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
CD46-205ENST00000358170 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CD46-205ENST00000358170 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
CD46-205ENST00000358170 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
CD46-205ENST00000358170 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
CD46-205ENST00000358170 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
CD46-205ENST00000358170 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
CD46-205ENST00000358170 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
CD46-205ENST00000358170 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
CD46-205ENST00000358170 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.89
CD46-205ENST00000358170 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
CD46-205ENST00000358170 PRO2289Q9P1D8 64 aa3.19□□□□□ -1.9
CD46-205ENST00000358170 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
CD46-205ENST00000358170 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
CD46-205ENST00000358170 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms